Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                          <------ZmHOX2a(1)                                                                                       <---------bZIP60(2)                                                                                    --------->ALFIN1                                                                                  <---------ANAC58                                                                                  <---------ANAC58                                 <---------YAB1                                   <---------ANAC46                            <------MYB46(1)                                  <---------ANAC58                    <---------YAB1                                           <---------ANAC58             <---------ANAC58   ----------------------->TaNAC69(2)           <---------AtLEC2        <---------TOE2(3)   <------MYB83                                     <---------ANAC46        <---------YAB1  <-----------RAV1(1)                                 <<<<<<<<<<ABI3   --------        <---------TOE1(3)   <---------MYB46(3)      <---------ZAT14         <<<<<<<<<<FUS3 <------NtERF2 -->GLK1(2)  <---------ANAC58<-------GAMYB    <-----------HVH21         --------->ARR14(2)--------->ANAC58 ->GLK1(1) xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(s2)     --------->ZAT14     <---------ARR14(2)--------->ANAC58   catgttgtttatggttcttgttatttttgttggttatgcttcttggtatgtcactgaacttctgaagaaaaatggatttgcatggagtgaggaggcaaca  10750000          <---------DAG2          --------->TOE2(3)                                                                       <--          --------->TOE1(3)                                                             <---------MYB46(3)        ------>MYB83                                                                    <------MYB46(1)        -------->P                                         <---------ANAC46             <------MYB83        ------>MYB46(1)            ---------->ID1     <-----------RAV1(1)           <-----------RAV1(1) --->RAV1(1)             <----------DOF2      ---------->DOF2         <---------ZAT6--------->ATHB12   agagcattccaaccttatatgagatggctatatgtttgtttttttagggaaagaaaatgttgcatataactagtgtttttggagaattgttggtgaacaa  10750100                                                                                 <---------GLK1(2)                                                                                 --------->ARR14(3)                                                                                 <---------ARR11(3)                                                          <---------RVE1(1)      <---------ARR14(3)                                                          <---------CCA1(1)      --------->ARR11(3)                                         <------MYB46(1) <---------ARR11(3)      <---------ARR14(2)                       <---------AHL20(2)<------MYB83   --------->YAB1 <-------GAMYB                      --------->AHL20(2) <---------MYB46(3)        <---------At4g35610                      <---------AHL20(2)<---------AtMYB61--------->ARR11(3)    ----------->ARR10 ----ZmHOX2a(1)----------->GT1      <---------TOE2(3)  <---------YAB1 <---------MYB46(3)   ggactcatggaaattcaaggtgaataaaattcaacattagggatggtttgaagtttgatgatatttttcagatggttagcgaagattttggtatagataa  10750200                                            ----------->GT1                                         --------->ICU4                                     --------->DEAR3(2)                                     --------->MYB46(3)                                    ------->TEIL                               ----------->RAV1(2)                               ----------------->AGL1                                       ---------                               <---------ANAC46                                         --------->ATHB12                               <---------ANAC58                                         --------->YAB1                               <---------ANAC58                                         -------->HAHB4                             --------->WRKY38(1)               <---------CCA1(1)       <---------YAB1                 xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)         <---------RVE1(1)       --------->ICU4         ----------->GT1  <---------ANAC58  <---------YAB1    --------->ARR14(2)     <---------ICU4         <---------ANAC46 <---------ANAC58--------->YAB1      --------->ARR11(3)     --------->YAB1    --------->YAB1    --------->CCA1(2)  <---------ATHB12     <---------ARR11(3)    --------->ICU4   <-------TEIL xxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)      ---------->DOF2   <----------DOF2 ---------   gttgattcatgaggtagaacttagctatgcgttgcctgaaccgatgatgaaaaacatgctgaaagatattcttccagtctttgtgaataatgataggcaa  10750300                                        <----------DOF2                                   <-------TEIL                               ------->TEIL                              <---------AtLEC2   <---------HSFB2a(1)       <-------TEIL                                                --------->AHL20(2)   --------->HSFB2a(1) <---------ARR14(2)                                        <------ZmHOX2a(2) >ANAC58               --------->ARR14(2)            ---------->DOF2            <---------ARR11(3) >ANAC58 <----------DOF2<------ZmHOX2a(2) <-----------GT1 --------->GLK1(1)     --------->ARR11(3)*TSS   ttggatagttcctttggaatttgcagatcgatgcatgttcgtctttacatctctgtaaagaattctaaaccaagagcatcaagatcaaagtttaaatttt  10750400                                                                    <------MYB46(1)                                                                    ----------->GT1                                                                    <------MYB83                                                                   --------->MYB111(1)                                                            ==================RAV                                                            <-----------RAV1(1)                                                          --------->YAB1                                                         --------->ICU4                                                        <---------AHL20(2)                                                  --------->YAB1  <-----------RAV1(2)                                         <---------WOX13(1)<---------TOE2(3)             <---------ZAT14                                       --------->ATHB12--------->YAB1             <---------At4g35610        <-----------RAV1(1) ----------->GT1----------->GT1<---------ICU4          <---------ICU4    <---------GLK1(1)   --------->DAG2<---------YAB1  <---------AHL20(2)         --------->ICU4    --------->GLK1(1)  ---------->DOF2--------->ICU4 --------->AHL20(2)     --------->YAB1   tgtgagatttctgtggttttttggagaaagtggtaagaacatgattggaaaatcatataataatgttggcaggtagaatagtaatgctgactgaagttga  10750500                                                                                         <-------MYC3                                                                                         ------->MYC3                                                                                      <---------ANAC58                                                                                      <---------AtLEC2                                                                                      <---------ANAC58                                                                            <---------ANAC55(2)                                                                           <---------LBD16                                                                         <---------ARR14(2)   -------                                         <---------MYB46(3)              --------->ARR14(2)   -------                         --------->WOX13(1)                      <---------ANAC58     <---------ANAC46               <---------YAB1           <---------ATHB12         <---------ANAC58 <---------ANAC58          <---------ANAC58    ---------->DOF2               <-----------------AGL1<---------ANAC46          <---------AtLEC2  --------->YAB1           --------->WOX13(1) xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)          <---------ANAC58--------->AtLEC2       ----------->GT1 <---------ANAC46 <---------ANAC58   gttttctaacttgcatgatgagaatgtcattcaaaaggagcaatggttcaagagtaaatcagacctgtcttggaaaatacggatgcttgcatgtgaacga  10750600                                       <-------GAMYB                                  <---------MYB46(3)            --------->At5g28300                        <---------At4g35610                    ----------->GT1                    <-----------HVH21 <------MYB83--------->ALFIN1                   --------->ANAC58   <---------MYB46(3)       --------------->AGL15                   --------->ANAC58   <------MYB46(1)          <---------------AGL15        <-----------GT1 --------->At4g35610 --------->AHL20(2)<-----------------AGL3     --------->ARR14(2)xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)<---------ARR11(3)                    --- -->ANAC58         --------->ANAC46   ----------->GT1     --------->ANAC58            ---------->DOF2 -->ANAC58     <-----------GT1    --------->MYB111(2)     --------->ANAC58   <-------TEIL        ----   aatttcagatttactatttacaagtcagagcccaagttgttggttataaaatgtgttgacaagaactgtaaatggaagattcaatgtacaaagaagaaga  10750700                                                                  --------->AtMYB61                                                                ----------->RAV1(1)                                                       <---------ICU4                                                       --------->ATHB12                       <------          <---------LBD16      --------->MYB46(3)      -------->ATHB1                  <---------ANAC46 ------>TOE1(2)             <---------ETT(2)          <---------YAB1---------->DOF2  --------->MYB52(1) ----->CCA1(2)     ---------->DOF2                 ------------>ATHB5           ---------->DOF2   catgcgagtatttctgggtaacaaagtatatcgacaaccatacatgtctcggtagaatcattggtccaccaaaagcttcttccaaagtaacgagtaagct  10750800                                                <---------ICU4                                                ------>ZmHOX2a(2)                                              --------->ARR11(3)                                              <---------ARR11(3)                           <---------HSFB2a(2)                   --------->MYB52(1)   ------>MYB83                          --------->ICU4        - ---At4g35610     --------->RVE1(1)     ------>MYB46(1)               --------->CCA1(2)    --------->HSFB2a(2)   tattttggataattttagaaatatcggtcttagtatgaaaccaaatttgatcttgacaattttgaagaaacgatatggtattgattcaaaatactggaag  10750900  Previous    Next  AGI:  At5g28698.1    Description:  transposable element gene. Mutator-like transposase family, has a 3.1e-28 P-value blast match to GB:AAA21566 mudrA of transposon=""MuDR"" (MuDr-element) (Zea mays) Range:  from: 10750398    to: 10752197    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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