Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                         <---------ANAC58                       <---------ANAC58                                                            <-                      <-------TEIL                                                                 <-                  --------->DAG2                                                                  ---          --------->DAG2                          <---------DAG2                   ---------->DOF2<--         ---------->DOF2                          <----------DOF2             ----------->GT1     <--   ---------->DOF2<---------------AtSPL8         --------->TOE2(3)       --------->YAB1---------->DOF2 ------AHL20(2)   <---------TOE1(3)          <----------DOF2            <---------AHL20(2)        --- ---->AHL20(2)    <---------TOE2(3) --------->GLK1(1)        ---------->DOF2---------->DOF2    ------ ->AHL20(2)----------->GT1          <---------GLK1(1) <---------YAB1   --------->AHL20(2)  ----------   taatataaagaaaaagttataaggtacttgcaagagagatttcttcactttcctttatgaattcaaagaaacatataataaagaaaaaagaaagagataa  10649500                                                                                        --------->ATHB12                                                                                       <---------ATHB12                                                                                       --------->ICU4                                                                                   ------>MYB83 <----                                                                                   ------>MYB46(1)                                                                                  --------->ANAC58 --------YAB1                                                                     --------->ANAC46 <- --------AHL20(2)                                                                 --------->ANAC58 -- ------>AHL20(1)                                --------->CCA1(2)               --------->MYB46(3)--- -------AHL20(1)             <------ZmHOX2a(1) <---------ARR14(2)       <---------ANAC46<---------ICU4 -------AHL20(2)    <------ZmHOX2a(1)          --------->ARR14(2)   <---------ANAC46  <---------RAP2.6(3) ------>AHL20(2)  ------------------------>ANAC81 <---------YAB1    <---------ANAC58  <-----------HVH21 --->AHL20(2) <------ZmHOX2a(1)       --------->GLK1(2)   ----------->GT1     <-----------GT1-------- ->GT1  >>>>>>>>>TBF1  <------ZmHOX2a(1) <-----------RAV1(1)        <---------ANAC58--------->MYB46(3)   tataatagaagaagaaggagaaggaggagaaggagaagagaacctgttggatatgatcagaggtaacattgctggggtagtaaccagccatcatgggctg  10649600              <-------GAMYB        <---------At4g35610                                                      --------->AHL20(2)        --------->At4g35610                                                 <---------AHL20(2)      <-----------RAV1(2)                                               <---------AHL20(2)      ===================RAV                                           --------->AHL20(1)    <-----------HVH21                                                  <---------AHL20(1) --NtERF2    <-----------RAV1(1)                                    <---------AHL20(2) --------At4g35610                                <---------ICU4    --------->AHL20(2) ------->At4g35610      <----------DOF2          <---------YAB1 <---------AHL20(2) ---->TEIL--------->ALFIN1        <---------AHL20(2)            --------->AHL20(2)          <-------- ->At4g35610 <---------MYB46(3)  --------->AHL20(2)            <---------AHL20(2)<---------AHL20(2)   catctgcatcaggtgctgttgcatttcttttgctattttatataaaacctgataattccttcttatttatttatatattttatatatataagtttttata  10649700           --------->AtMYB61           ----------->RAV1(1)                                           --------->ARR14(2)          --------->MYB46(3)                                             ------->TEIL         ------>NtERF2                                                   <---------ARR14(2)         ----------->RAV1(1)                                            <---------CCA1(2)        <---------ALFIN1                                           <----------DOF2        --------->ANAC46                                        <---------AHL20(2)     ------->GAMYB   --------->LBD16                            <-----------GT1    --------->MYB46(3)      ---------->DOF2                 <---------RVE1(1)   -------->P--------->ANAC46                              <---------ARR11(3)                ------>ZmHOX2a(1) -YAB1 --------->MYB46(3)<------ZmHOX2a(1)                 --------->ARR11(3)           <----------DOF2   gagacaacccccaccacaaaacccagaggaaaaagagaagtctcaccaagtgagagagagagatattaacttttgtatctgtctctctctctttcctcta  10649800                                                                                         <---------ANAC46   --------------->AGL15                                                   --------->ANAC46   <---------------AGL15                                               ------>ZmHOX2a(1) ----------->GT1  <-----------------AGL2                                              --------->ANAC46   <---------ANAC58  ----------------->AGL3              ------->TEIL            <----------DOF2            <---------ANAC58  <-----------------AGL3             <---------CCA1(2)        <---------DAG2 ---------->DOF2    *TSS   tgcttctgtatatagaaaactcttaactattgaagatgtgtatctctgtgtgtgtgttatctcgctttctctcctccacaaaagttgttttgcgttaaaa  10649900                                                                                                <----                                                                                                <----                                                                         <---------TOE1(2)      <----                                                                      <---------ANAC58      <--------                                                                      <---------ANAC58 <------MYB46(1)             --------->ZAT14                                     <----------DOF2       <------MYB83             <---------ZAT18                                 ---------->ID1           --------->MYB59             <---------ZAT14 ---------->DOF2                <-----------GT1           <---------AtMYB61   gactgagagagacagtgaagtctcttaaatagaaagagagagagagaagagaagagagtgtttttctctttttcttgggttttggggtttggttttgttg  10650000                                                    =====================bZIP_DOF                                                    <---------ANAC58                                                    <---------ANAC58                                                    <---------O2                                                    <---------bZIP60(2)                                                    <---------TGA1a                                                 ----------->HVH21                                                 ----------->TGA1                                                ------->MYC3                                                <-------MYC3                                               --------->ANAC46                                               <---------ANAC55(2)                                               --------->O2                                               --------->ANAC55(2)                                               --------->ANAC58                                               <---------ANAC58            --------->O2                                               <---------O2                <---------O2                                               --------->TGA1a             --------->TGA1a                                               <---------ANAC46            <---------TGA1a                                               --------->bZIP60(2)         <---------ANAC58                                               --------->bZIP60(1)         --------->ANAC55(2)                                               <---------bZIP60(1)         <---------ANAC46                                               ==========================bZIP_DOF                                               <---------TGA1a             <---------ANAC58                                               --------->ANAC58            <---------ANAC55(2)                                               <---------ANAC58            ====================bZIP_DOF                                               ==========================bZIP_DOF                                               <---------bZIP60(2) --------->YAB1   <----------DOF2  <----------DOF2                            ------------->DYT1   <---------YAB1 --------->ARR11(3) --MYB83                                    ----------->HVH21 <---------DAG2<-----------HVH21 -----MYB46(3)                             ----------------->PIF3(1)      <-----------------------TaNAC69(2) --MYB46(1)     <---------CCA1(2)          <-----------HVH21  <----------DOF2    <---------ARR11(3) ---RAV1(1)     ------>ZmHOX2a(1)       <------ZmHOX2a(1)     =======================bZIP_DOF   gtttctttctgtctcatcctatctctgtctctgcgaagaagaggaggtcacgtgacgagtcatactttattatagagacgtgagacctttacatatatac  10650100                                       <----------DOF2                                   <---------YAB1                                 --------->ATHB51                                 -------->ATHB1                      ----------->GT1------>MYB46(1)                                 <---------ICU4                      --------->ANAC55(2)                                --------->AHL20(2)                   --------->ANAC58                                <---------ATHB51                     --------->ANAC55(1)                                --------->ICU4                       <---------ANAC55(2)                                <---------AHL20(2)                   --------->ANAC58    <-----------GT1                             --------->AHL20(2)                      --------->ANAC46  --------->YAB1                             <---------AHL20(2)          <---------ANAC46      <-----------GT1 ------                            --------->AHL20(2)     ------->TEIL      --------->O2   ------>MYB83<----      <---------YAB1        <---------AHL20(2)    <-----------GT1    <---------O2 <---------MYB59   tactacttatcaatatgtacacattgttgattaaattattactttgaagtttgaacccttcgtatatagagacgtaactatataccaaataatactgttt  10650200                                                                                    <-----------GT1                                                       <---------AHL20(2)        --------->ARR11(3)                           <---------ANAC58       ------->TEIL                   <---------ARR11(3)                 ----------->GT1               <---------ANAC55(2)               <---------ICU4             --------->ARR14(2)        --------->ANAC55(2)--------->ARR11(3)     --------->AHL20(1)       <---------TOE1(2)   <---------ANAC58    <---------ANAC46                  <---------AHL20(1)       <---------TOE2(2)   <---------ANAC46    <---------YAB1         <----------DOF2  ------>ZmHOX2a(1)      <-----------GT1 <---------AHL20(2)--------->RVE1(1)   <---------AHL20(2) --->ZAT14   <---------ARR14(2)    <---------AHL20(2)  --------->AHL20(2)      <---------AHL20(1) -------GT1------->TEIL  <---------AHL20(2) --------->ICU4<---------ARR11(3)  --------->YAB1        <   actccttcgtatgtatatacggtgtatttacttgtatatatatgtaattatgtatattaaaatctcttacaacttttgtataatattttctacatttata  10650300                                                                    --------->AHL20(1)                                                                    --------->AHL20(2)                                                                    <---------AHL20(1)                    ---------->DOF2                                 <---------AHL20(2)                 --------->YAB1                               ----------->GT1                <---------YAB1---------->DOF2         <---------GLK1(2)      <---------LBD16--------->DAG2                <---------HSFB2a(2)                            <--      <---------ANAC46     --------->AtLEC2        --------->HSFB2a(2)                         <----- -------TEIL <---------AHL20(2)      <------ZmHOX2a(1)<-----------------AG <------------------------ANAC81   gattcatttcgggattttataataaagtaatgcaaagtaggatttattgttttctagattgttttggtaatttattgttttctagttttctagttttctt  10650400  Previous    Next  AGI:  At5g28640.1    Description:  AN3 (ANGUSITFOLIA3). similar to GIF3 (GRF1-INTERACTING FACTOR 3) [Arabidopsis thaliana] (TAIR:AT4G00850.1); similar to unknown [Populus trichocarpa] (GB:ABK94681.1); contains InterPro domain SSXT (InterPro:IPR007726) Range:  from: 10647574    to: 10649896    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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