Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                        ------>ZmHOX2a(2)                   -------->HAHB4                       <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                  --------->ICU4                     --------->ANAC55(2)                  <---------YAB1                     <---------ANAC55(2)  <---------AHL20(2)                --------->YAB1                    --------->ARR14(2)      --------->AHL20(2)                <---------ICU4                    <---------ARR14(2)     --------->AHL20(2)               --------->ICU4            --------->ARR11(3) <---------TOE2(3) -----GAMYB <---------YAB1             ------->TEIL <-------TEIL    <----------DOF2             <---- ----->ALFIN1--------->YAB1   xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3) <---------DAG2           <-------   tgttgagtttccatatgataatgatccaaacgactacgacgaacatattgccgatacatatcgaggtttactttatttaatttttgtttttagtagatta  10534400                             <---------ZAT6                            <---------YAB1                                                <---------ANAC55(1)                      <---------AHL20(1)                                                  --------->ANAC55(2)                      --------->AHL20(1)        --------->ARR11(3)                        <---------ANAC55(2)         <----------DOF2 <---------YAB1         <---------AHL20(1)                        <---------ANAC58      ---------->ID1  <---------AHL20(2)       <---------CCA1(2)                          <---------ANAC58 <----------DOF2      --------->AHL20(2)    <-------TEIL                                  <---------ANAC46 -----ARR11(3) --------->At4g35610        --------->YAB1                               <---------MYB52(1) --GLK1(2)     <---------At4g35610  --------->ANAC46       <-----------GT1  <---------AHL20(2)   tctcttttgttcttttctgctcattttattagtattacaaacaatattcatatattgatatatactgtattgttttgtttattttggccattacgtgttt  10534500                                                                            --------->ANAC58                                                                            --------->ANAC46                                                                            <---------ANAC55(2)                                                                    <---------TOE2(2)                                                                    <---------TOE1(2)                                                           --------->ANAC58 --------->ANAC58                                                           <---------ANAC55(2)                                                           --------->ANAC55(2)                                                           --------->ANAC58 --------->ANAC55(1)                                                           --------->ANAC46 --------->ANAC55(2)                                                          --------------->AtSPL8                              ---------->ID1              --------------->AtSPL3          ------->TEIL <---------ANAC58                  <-----------GT1  <-----------GT1   <--------       <---------ATHB12<---------ANAC58       ----------------------->TaNAC69(2)     <---------TOE2(2)   catgtccaaatgaatatgttttcatgcgttttgttttttttcttcagttttcatgtgtttcacgtactcatatgtttcacgtattcatatgttagcatgg  10534600                                                       --------->AHL20(2)                          <-                                              ----------->GT1                                      <-                                             <---------YAB1                                        --                                    <---------YAB1     <---------AHL20(2)                         ---                                  --------->CCA1(2)    <---------AHL20(1)                         <--                                 --------->ARR11(1)    --------->AHL20(1)                       <----                                 --------->ARR11(3) --------->YAB1         <---------YAB1 --------->GLK1(2)                                 <---------ARR11(3) --------->AHL20(2)     <---------TOE1(3)    -----           <---------YAB1     <---------TOE2(3)    <---------YAB1          <---------TOE2(3)   <----- -AtLEC2   <---------AHL20(2)---------->DOF2 --------->ICU4   <-----------HVH21  <---------YAB1<-----   taatgtgttttttttaattgtactcatgtattaaagatatgtttgtcatggttataatataatatgtcagtgtatttaagattatttttgctaatctata  10534700        ----------->GT1    <---------YAB1                                                                              ----- --------AHL20(2)                                       ----------->GT1                ------------>CBF --------ICU4                                       --------->ANAC58                  xxxxxxxxxxxxxxx ------>HAHB4                                       --------->ANAC58                  <-----------GT1 ------>ICU4                             <-------TEIL ---------->DOF2             --------->ATHB12 -------YAB1                         <---------------AtSPL3                     xxxxxxxxxxxxxxxxxxxxx ----HAHB4                           <---------------AtSPL8                 xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2) ---->YAB1                        xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)     --------->CCA1(2)    xxxxx ----YAB1                 <xxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)     xxxxxxxxxxxxxxxxxxxxx>smallRNA(i2) ----AHL20(2)        xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)   xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)   attattctgatggaaaatacagagatggctcatgttgatcaagtacataaactcaagaaagtaactcaaacgcagagagatggatgatttacaatgctct  10534800                                                                   <---------MYB59                                                                  <---------ANAC55(2)                                                                  --------->ANAC55(2)                                                                 xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)                                                                 xxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                                                                xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)                                                                xxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)                                                                xxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                                                               <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                                                               xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)                                                   ------>ZmHOX2a(1) ------>MYB83            <---------ATHB12           --------->ANAC58     xxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)            <---------ATHB51           --------->ANAC46  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)         <---------------AGL15         --------->ANAC58--------->AHL20(2)         --------------->AGL15       <---------ALFIN1  <---------AHL20(2)    xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2) ------>HVH21--------->MYB52(1)     <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)  <xxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3) xxxxxxxx>smallRNA(i2)   xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)<xx xx>smallRNA(i2)      *TSS          <---------REM1(2) --------->AHL20(2)   --------->SPL7       <xxxx xxxxxxxxxxxxxxxxxx>smallRNA(si3) <xxxxxxxxxxxxxxxxxxxxsmallRNA(fl3) ------>MYB46(1)   --------->GLK1(2)   gatggagagaacaaataatggaaaatgaaaacatatgctacacgcgaagtctcctatttatttgagatacctatccatacggtgcaaagaatatggaatc  10534900                                                    <xxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                       xxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                    xxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)                   xxxxxxxxxxxxxxxx>smallRNA(i)   --------->ANAC55(2)            xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)  <---------ANAC55(2)          xxxxxxxxxxxxxxxx>smallRNA(i)          <-----------RAV1(2)                            <-----         xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)  <------ZmHOX2a(2)                               <-----        <---------HSFC1(2)                    <---------ARR11(3)                         <---------AHL20(1)        --------->HSFC1(2)                ---------->DOF2                                --------->AHL20(1)        --------->HSFB2a(1)             <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)             <---------AHL20(2)        <---------HSFB2a(1)           --------->TOE2(3)                                  <xxxxxxxxxxx     <xxxxxxxxxxxxxxxxsmallRNA(i)    ----------------->AGL1                  --------->ANAC46--------  ---------->DOF2 xxxxxxxxxxxxxxxx>smallRNA(i)--------->ARR11(3)          <xxxxxxxxxxxxxxxxsmallRNA(i) xxxxxxxxxxxxxxsmallRNA(i)       <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3) <---------ARR14(2)--------->AHL20(2) xxxxxxxxxxxxsmallRNA(i) <xxxxxxxxxxxxxxxxxxxxsmallRNA(i2)             --------->GLK1(1)--------->AHL20(2)   gggcaaaagaaacttctaacaatggcgatgtcgatgttttccataaaagatcaggtaattgtagtcggaagcgaattccactctatttgaataaatttct  10535000                                                                             xxxxxxxxxxxxxxxx>smallRNA(i)                                                                           <---------O2                                                                           --------->O2                                                                           --------->TGA1a                                                                           <---------TGA1a                                                                           <---------ANAC58                                                                           --------->bZIP60(1)                                                <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                                               xxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)                   x                                              <xxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                 <                                             <xxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                   <-                                            <----------DOF2                <---------bZIP60(2)     --                                  <----------DOF2                          <---------ANAC58        --                           <---------TOE2(3)=========================================bZIP_DOF      --                      xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)             xxxxxxxxxxxxxxxx>smallRNA(i)<                    <xxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)          xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                    <---------ALFIN1       <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)          ----------->GT1    <---------ICU4  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)        <---------ICU4    --------->ANAC58 -- ----ANAC58         <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)      ----------->RAV1(1) --------->ANAC46 <- ----ANAC58        --------->MYB46(3)    --------->GLK1(2)   --------->REM1(1)    --------->ANAC58xxx xxxxxxxxxsmallRNA(fl3)   <xxxxxxxxxxxxxxxxsmallRNA(i)  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)-------- ->ARR11(3)   xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)    --------->At4g35610xxxxxxxxxxxxxxxx>smallRNA(i)   tgatactcattacacaagagaaccactctaaggtcgctttgagcatctttgaatgtaagctctacaacattacattgacgtctcaagcaaggggttattc  10535100        <---------ICU4 --------->TGA2(2) xxxxxxxxxxxxxxxxxx>smallRNA(fl3) -----------TGA1 --------O2 ------->O2 ------->bZIP60(1)             ----------->GT1 ------->ANAC46          <----------DOF2 -----------HVH21      ------>MYB46(1) ------->bZIP60(2)     ------>MYB83              <------ZmHOX2a(1) --------bZIP60(1) >>>>>>>>>>MYB80         ---------->DOF2                            <----------DOF2 xxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)   --------->AHL20(2)                              <---------DAG2 ->KAN4(2)        <-----------GT1   --------->AHL20(2)                  <-----------RAV1(1)       ---   gacgtcatactaatgccattaaaccaactttgaaggaaaaaaatataaagaggagactctaattttgtttctctatgttggacaaatactttatctcatg  10535200                   --------------------->WRI1             --------->AHL20(2)          <---------------AtSPL8                  ----------->HVH21       --------->AHL20(2)                ----------->GT1  <---------AHL20(2)       <---------AHL20(2)xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3) ----------->GT1          ---------->DOF2 ---->TEIL--------------->AtSPL8<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)       <-----------------AGL2  <   aaccaaaatttatatgtacaatattgtgcatatcgatgaaaaatggttttatatgacgaataaaatggagaaatactatctacttctggccaaagaagag  10535300  Previous    Next  AGI:  At5g28535.1    Description:  transposable element gene. Mariner-like transposase family, has a 1.2e-97 P-value blast match to GB:AAC28384 mariner transposase (Mariner_TC1-element) (Glycine max) Range:  from: 10534822    to: 10536029    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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