Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100       <---------YAB1 --------HAHB4                                                                                      - ---------ICU4                                                       ---------->DOF2              --- -------->YAB1                                                     <---------AHL20(2)        -------- -----ZmHOX2a(2)                                               --------->AHL20(2)     --------------- --------ATHB12                                        <---------ANAC46              <----------ID1--   gatcattaccattgctctctctgtctctctgtctctctccctctctctctctgtctctcgtgtttttatataaaagtacttcagaaaaaaacaaaaaaag  10358000                         <---------ZAT14                                       --------->ARR11(3)          ---------->ID1 --------->ZAT14                                      <---------At4g35610       <-------TEIL    --------->ANAC46                                       --------->At4g35610 -------->GLK1(2)    --------->ANAC58                                    --------->ANAC58 ------->DOF2        --------->ANAC58                                    --------->ANAC58 -->DOF2--------->MYB52(2)                         --------->At4g35610--------->ETT(2) --------->ANAC81    --------->ANAC46       <---------AHL20(2)        <---------ETT(2)         ------ ------->DAG2      <---------ALFIN1         --------->AHL20(2)     <-----------RAV1(1)      ------>ZmHOX2a(2)   aaaagctggttcgtcgttctcacacactacacattcggaaaaccatttatataagctctctctctctctctgtggacggaagctctcgctctgatctcac  10358100                                                                                           <---------                                                                                          xxxxxxxxxxx                                                                                         --------->HSFB2a(1)                                                                                         --------->HSFC1(2)                                                                                         <---------HSFC1(2)                                                                                     --------->DEAR3(1)                                                                                   ------>NtERF2                                                                                   --------->ABI4(1)                                                                                  --------->DEAR3(1)                                                                                  --------->DREB2C(2)                                                                                 --------->DEAR4(2)                                                                                 --------->ORA47(2)                                                                                 --------->MYB46(3)                                                                                 --------->DEAR3(2)                                                                                <xxxxxxxxxxxxxxxxsmallRNA(i)                                                                                xxxxxxxxxxxxxxxx>smallRNA(i)                                                                                <---------ATERF1(1)                                                     <---------GLK1(1)        <---------ZAT14                         <---------ANAC46          xxxxxxxxxxxxxxxx>smallRNA(i)<xxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                         <---------ANAC58     --------->ANAC58                --------->ZAT14                     --------->ZAT14          --------->ANAC58           <---------At4g35610                     <---------ZAT14        ------>NtERF2                --------->At4g35610    -----    --------->At4g35610  <---------ANAC58  --------->DEAR3(1)            <---------ZAT2 <xxxxxxxxxxxx    <---------At4g35610<---------ANAC46    ----------->HVH21             --------->ZAT2 <xxxxxxxxxxxx ------>CBF         <-----------RAV1(1)    --------->ANAC46 <xxxxxxxxxxxxxxxxxxxxxsmallRNA(i2) xxxxxx   aatgtaagctctctctctctctgtgttgtgtgtttgtatttctctccgacgctagatttctccatggttcttatgagctgagcaccgccgaagctttcct  10358200                                                                        --------->DEAR3(1)                                                                       <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                                                                       <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                                                                      <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                                                                      <xxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                                                                     --------->AtMYB61         <---------SPL7                                             <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(l2)        --------->DEAR3(1)                                          <xxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)     <---------ANAC58                                             --------->YAB1        <---------YAB1     <---------ANAC58                    --------->ZAT2           <-----------GT1    <---------MYB52(1) -DOF2<-----------HVH21           ------>NtERF2                 <xxxxxxxxxxxxxxxxxxxxsmallRNA(i2) xxxxx>smallRNA(i)               <---------ETT(1)            <---------MYB52(1)     <-------GAMYB ->ZmHOX2a(1)     <----------DOF2--------->DEAR3(1)        <---------ANAC46  --------->DOF5.7(2) xxxxxxsmallRNA(fl3)             ----------->HVH21         <---------ANAC58 <-----------HVH21 xxxxxxxxxxxsmallRNA(fl3)  <----------DOF2                 <---------ANAC58 <-------GAMYB xxxxxxxxxx>smallRNA(i)---------->ID1   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)<---------MYB52(1)   ctgcattccgtcgtccctctcttttgtctctttctccgaccctagctctctctcttctcttccgtttatcaccatcgccgttagcccgttaccattctct  10358300                                 <------ZmHOX2a(2)                      <------ZmHOX2a(1)                                <---------ARR11(3)              --------->YAB1  <---------GLK1(1)                                <---------ARR14(2)              <---------ICU4 --------->ARR14(2)   -                            <-----------GT1    <---------AHL20(2)  --------->YAB1        <---------REM1(1)                    <---------DOF5.7(2)        --------->AHL20(2) <---------YAB1--------->GLK1(1)   -                  --------->DOF5.7(2)   <---------TOE2(3)      <---------YAB1  <---------ARR14(2)   -                  <---------MYB52(1)    <---------TOE1(3)      --------->ICU4--------->LBD16       --                 <-------GAMYB  --------->ARR11(3)          <---------YAB1 <---------LBD16        <--           <---------MYB52(1)   --------->ARR14(2)        <---------MYB46(3)<---------ANAC46     <---   ctctctcttctccgttctccgttaacttattcacgatctactaaggtttttaatttttgtttgttattattataggatgcggatttctgtgatgaagccc  10358400              <-------TEIL                         --------->YAB1             <---------ARR14(2)                   --------->ICU4             <---------ARR11(3)                   <---------ATHB12        ------>MYB83                              <---------YAB1        ------>MYB46(1)                      --------->ANAC58        -------->P                           <---------ANAC55(2)       ----------->RAV1(1)                   --------->ANAC55(2)       ==========================RAV         --------->ANAC58      --------->AtMYB61                      --------->ANAC55(1)      <---------MYB55(2)                    --------->SPL7      --------->MYB46(3)                    <-------TEIL     --------->MYB46(3)                   <---------SPL7     <---------MYB52(2)                --------->SPL7    ------>NtERF2                      --------->ZAT18   --------->DEAR3(1)                <xxxxxxxxxxxxxxxxxxsmallRNA(fl3) --------->DAG2 -------->ANAC46       ------>ZmHOX2a(1)<---------------AtSPL3       ---------->DOF2 -------->ANAC58       --------->LBD16--------->ALFIN1            --------->YAB1          xxxxxxxxxxx -------->ANAC58     ----------->RAV1(2)--------------->AtSPL3   <---------ATHB12         <----------DOF2 ------->SPL7--------->ARR14(2)     <---------ANAC46           --------->WOX13(1)<-------GAMYB    --- -------MYB52(1) <<<<<<<<<TBF1      <---------ANAC58    <---------ARR11(3)      ----------->GT1  ---- ------SPL7 <---------GLK1(2)       <---------ANAC58    --------->ARR11(3)   <XXXXXXXXXXXXXXXXXXXXXMIR864-3P   gttcgccaccaacaggttcttcttcctggactcttgaagcgtgcggtacgtaatcataaatctttcaatcaaaaagtttagggtgttattagctttgggt  10358500                                                                                          xxxxxxxxxxx                                                                                          xxxxxxxxxxx                                                                                         xxxxxxxxxxxx                                                                                         xxxxxxxxxxxx                                                                      ---------->DOF2   xxxxxxxxxxxxx                                                                    <---------YAB1      -------------                                                                  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                                                  xxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                                                                  --------->YAB1        xxxxxxxxxxxxx                                                                  <---------------AGL15xxxxxxxxxxxxxx                                                                  xxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)                                          --------->RVE1(1)       xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                         --------->ARR11(3)       xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                    <---------ARR11(3)   --------->GLK1(2)<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(l2)        ----------->GT1                  <---------ARR11(3)   xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)      <---------ANAC46            ----------->GT1     <---------At4g35610      <---------YAB1 xxxxxxxxxxxx>smallRNA(i2)      --------->GLK1(2)     --------->At4g35610 <------ZmHOX2a(1)xxxxxxxxxx ------>DAG2        --------->ARR11(3)  --------->RVE1(1) <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3) ------>DOF2      <---------TOE2(3)     --------->CCA1(1)xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)   aaagtttagggtgtaaattcaaggtattggagagaatcgaaaaaatctctgtttgtagcagaatacaactataaaaggatgatgcttaaaaaaaaaaaaa  10358600              <---------YAB1           <---------YAB1      --------->DAG2                                                                          -------     ---------->DOF2                                                                        <-------- xxxxxxxxx>smallRNA(le3)                                                               <---------At4g35610 xxxxxxxxxx>smallRNA(si3)                                                          <-----------GT1 xxxxxxxxx>smallRNA(si3)                                                      --------->AHL20(2) xxxxxxxx>smallRNA(le3)                                                       <---------AHL20(2) xxxxxxxx>smallRNA(si3)                                                      <---------AHL20(2)     < ----------->ANAC81                        <---------ANAC46               --------->AHL20(2)--------- xxxxxxx>smallRNA(le3)             ---------->DOF2                       <---------YAB1--------->At4g35610 xxxxx>smallRNA(si3)        --------->ZAT14<---------ANAC58            --------->YAB1  <---------ZAT2 xxxxxxxxxx>smallRNA(le3)------>ZmHOX2a(1) <---------ANAC58    --------->MYB46(3) ----------->HVH21 -   aaaaaaaaaaagtatgatgcttctatcctctaaactctaaagtttgtgtgtgttagagcaaattaacaaacattgattatttatttgacagctcaactgc  10358700                                           --------->At4g35610                                           <---------At4g35610                                      <----------DOF2 >GAMYB <---------ATHB12            <-------TEIL                                                <---- -At4g35610  <---------GLK1(2)  --------->DAG2                                             ---------- ---------At4g35610           ---------->DOF2             <-----------GT1           <---------GLK1(2) >At4g35610<---------YAB1     xxxxxxxxxxxxxxxxxx>smallRNA(fl3)                   <---------WOX13(1) -------->At4g35610        ------>ZmHOX2a(2)      --------->GLK1(2)            --------->ATHB12 -----   atagctgcaaatcaagattgtgaagttgatccaaaaggtactttctgctgataatctaatataccttgtagtaatttgaattgattgattcttgttgttt  10358800             <------MYB83             ----------->GT1                                  --------->ANAC58             <------MYB46(1)                                  --------->ANAC58            <---------TOE2(2)                                 --------->ANAC46                -------            <---------TOE1(2)  <------ZmHOX2a(1)           <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)-----           <---------MYB52(1)  ===========================HOX2a_HOX2a                      <---------At4g35610         <---------MYB46(3)   --------->At4g35610        <------ZmHOX2a(1)                 <---------ZAT2 -----AHL20(2)              --------->YAB1         =============HOX2a_HOX2a<-------GAMYB   --------->At4g35610 >ID1    --------->ATHB12   <-----------RAV1(2)    ------>ZmHOX2a(2)--------->AtMYB61      --------->ZAT2 ---->AHL20(2)         <---------At4g35610       <---------ARR11(3)<------NtERF2     <-----------HVH21   aaatgtttgattcgttggtaatttctgctatcaggagacatgactaaaattgatctcaaggaccaaggcaccaatgctgttgagactggtcgcagcagca  10358900  Previous    Next  AGI:  At5g28410.1    Description:  unknown protein Range:  from: 10358377    to: 10359442    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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