Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                   <---------------AGL15                                                                     --------->TGA2(2)                                                                    --------->TOE2(3)       <--------                                                                    <-----------TGA1        <--------                                                                    <-----------HVH21       <------MYB83                                                                   --------->ANAC58         <------MYB46(1)                                                                   --------->bZIP60(2)     <---------MYB46(3)                                                                   --------->ANAC58       --------->ALFIN1                                                             <---------ZAT18     <----------DOF2                                           --------->ANAC58  --------->ZAT14  --------->AHL20(1)          <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3) --------->MYB46(3) --------->ANAC46   ---------->DOF2      <------NtERF2                        --------->ANAC58<---------At4g35610<---------ARR11(3)      ------>NtERF2                  --------->ALFIN1      --------->ZAT2     --------->ARR11(3)    <-------TEIL                   <---------ANAC46        --------->At4g35610<---------AHL20(1)  <---------SPL7                   <---------ANAC58     <------ZmHOX2a(2)    --------->RVE1(1)  xxxxx ---------->ARR10                  <---------ANAC58    <-----------HVH21     --------->CCA1(1) xxxxxx   ttgaggtccgcccgattcaacttgagtactccatttggggtggagaagcaacaacgcgatcagctcactacgtcagaaaatatctttttaaagtgggtgt  10283400                             <---------ANAC46         --------->ANAC46                             ----------->GT1          <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(s2)                     <----------DOF2                 <---------LBD16                <----------DOF2                  <---------ARR11(3)               <---------ANAC58                  --------->GLK1(2)               <---------ANAC58            --------->ANAC46       <---------ANAC46     --------->ALFIN1--------->LBD16                 ------>ZmHOX2a(1)      xxxxxxxxxxxxxxxx>smallRNA(i)        <---------LBD16 -------->P    --------->ARR14(2)    <---------MYB52(1)    <-----------RAV1(1)    --------->ARR11(3)     <---------ARR14(2)      ----- -ANAC58      xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(s2)<xxxxxxxxxxxxxxxxsmallRNA(s)       <----------DOF2 -ANAC58    <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)<-----------ARR10--------->YAB1   <---------At4g35610 xxxxxxxxxxxxxxxxxx>smallRNA(se3)        <---------At5g28300--------->TOE2(3)      --------->At4g35610 xxxxxxxxxxxxxxxx>smallRNA(fl3)         <-----------GT1<------NtERF2   <---------CCA1(2)       ------   ttctcagttttgtgtttgctttccttttatgtggtgaatttttcaccgcaaaatctcggcaacctctatggtcatatcctctctcagctttagtttgaaa  10283500                                    <---------ALFIN1                                   <---------ALFIN1                                  <---------ALFIN1                                  <---------ATERF1(1)                                 --------->ANAC46                                 <---------ALFIN1                                <---------ALFIN1                                      <---------HSFB2a(2)  <---------MYB46(3)           <---------ALFIN1                    ------>ZmHOX2a(1)  --------->HSFB2a(2) ---->DAG2                   ------>ZmHOX2a(1)             <---------MYB46(3)     <---------ALFIN1 ---->DOF2<---------CCA1(2) <---------ALFIN1       ------>ZmHOX2a(1)       <---------MYB46(3)      <-   agcgttgttgccatctctccccttctctctcctcccccccccctatcgttctcctccatggtggttctcctccatggtggttctccacctcgaagccttc  10283600                                                          <---------HSFB2a(2)                                                     <----------DOF2                                                     <---------GLK1(1)                                                    <---------ANAC58                                                    <---------ANAC58                                               <-----------RAV1(1)                                               =======================RAV       <---------ARR14(2)                    --------->CCA1(2)       --------->ARR14(2)                   --------->ARR14(2)       <-----------ARR10                    <---------ARR11(3)      ------>MYB46(1)--------->ANAC46       <---------ARR14(2)      ------>MYB83  ------>ZmHOX2a(1)     --------->LBD16 <-----------RAV1(2)      <---------CCA1(2)                  <---------HSFB2a(2)  ------->TEIL  <---------ALFIN1         --------->HSFB2a(2) <---------ARR11(3) --------MYB52(2)  <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)  <---------LBD16     xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(s2)   gacgaaccaaatctcgtccctcctcgacacttatgctctcgttccagatatgtggctttcccagatgttttctctcaccgaatatcgctgatggcaagag  10283700                               ----------->GT1                               <---------ANAC46                               <------MYB46(1)                               <------MYB83                              <---------DEAR3(1)       --------->CCA1(2)                              <---------MYB46(3)      <---------ARR11(3)                              --------->MYB46(2)      <---------ARR14(2)                             --------->SPL7           --------->ARR11(1)                            <---------MYB52(1)        --------->ARR11(3)                      <---------RAP2.3(1)             --------->ARR14(2)                      ------>NtERF2                  <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                     <---------ANAC58           --------->ANAC46                     <---------ANAC58         ------>NtERF2                     <xxxxxxxxxxxxxxxxsmallRNA(s)   --------->ANAC58                                -                    xxxxxxxxxxxxxxxx>smallRNA(s)--------->ANAC58                                    -                --------->MYB52(2)           <---------DEAR3(1)                                     <              xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3) --------->ANAC58                               --              <---------MYB52(1)             --------->DEAR3(1)                         --------->MYB52(1)              xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3) ----------->ARR10                   ----------->RAV1(1)             --------->At5g28300          --------->ETT(2)                           --------->ANAC58            ----------->GT1<---------SPL7 <---------ETT(2)                           --------->ANAC58           <xxxxxxxxxxxxxxxxxxxxsmallRNA(se3)--------->ANAC46                        --------->ANAC46  xxxxxxxxxxxxxxxx>smallRNA(i)--------->MYB52(2)--------->ANAC58          <---------ATHB12         <-   tccagcctcttggaccgtaagttgcgcctcgttcggtgaaattgtcgacgacgcaagatatggatgaacagactcactcatgggctcaagcaacagtttt  10283800             --------->TOE2(3)           <-------TEIL      --------->YAB1   --------->WOX13(1)  <-------TEIL <------ZmHOX2a(2) -------->ARR14(2)                     <---------------------WRI1 -------->AGP1<---------YAB1    --------->ANAC46         --------->ARR11(3)            ------>NtERF2 ---------ARR14(2)              <---------ANAC55(2)  ---------->DOF2                  --------->DEAR3(1) ------->At4g35610              --------->ANAC55(2)--------->ANAC58                 ------>ZmHOX2a(1) --------At4g35610         <---------At4g35610     --------->ANAC58     --------->ZAT18--------->LBD16   cagatccatcatgttcattaatggaatccagcatacgtagttgcgatgtattcaagaaagctctaggtgctaagtggacgataatcctccgcctagcaca  10283900            <------NtERF2                                                                           <          <---------ANAC46                                    ------->TEIL                         --          --------->ETT(1)                                  <<<<<<<<<EIN3                         <--          <---------LBD16     <------ZmHOX2a(1)        ------------>CBF                   --------->DAG2       <-----------RAV1(1) <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)  <-----------GT1        ---------->DOF2     <----------DOF2    <----------DOF2             --------->AHL20(2)        ------------>CBF <-----   tagaacgctttgtcggggtctaagcgattttaggacgtttaggcagttttagaataaaacaatgtatatttctatactactacaatgttgaaaaagcatt  10284000                                                                            --------->AHL20(2)                                                                          --------->AHL20(2)                                                                         --------->AHL20(2)                                                                 --------->AHL20(2)                                                    ----------->GT1      --------->YAB1     <---------AHL20(2)                           ---------->DOF2<---------AHL20(2)     --------->AHL20(2)                      <---------------AGL15    --------->YAB1      --------->AHL20(2) --------->ICU4                              --------------->AGL15  --------->AHL20(2)    <---------AHL20(2) ---------AHL20(2)                        <-----------GT1        --------->AHL20(1)     <----------DOF2 ------->YAB1                      <---------AHL20(2)       --------->AHL20(1)      <---------GLK1(2) -------YAB1                       --------->AHL20(2)       <---------AHL20(2)      --------->ARR14(2) ----YAB1<---------ICU4         ------->TEIL <----------DOF2--------->AHL20(2)     <------ZmHOX2a(1)-   ataaaaattaaaaattatcaaatttttgaaaatgaatttaaattttacttttaaaagtaaaataaaataaaataataaaaatataggattctttaaatac  10284100                 --------->YAB1              --------->YAB1           <---------AHL20(2)      --------->AHL20(2)      <---------ARR11(3)      <---------AHL20(2)           <-------TEIL      <---------AHL20(1)        <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)      --------->AHL20(1)       <---------TOE2(3)                 --------->ANAC58      --------->ARR11(3)       <---------YAB1                    --------->ANAC46     --------->AHL20(2)  --------->AHL20(1)                      --------->ANAC58 --------->AHL20(2)      <---------AHL20(1)             --------->At4g35610                         x <---------AHL20(2)     --------->YAB1                  <---------At4g35610          xxxxxxxxxxxxxxxx -------->AHL20(2)  --------->YAB1--------->CCA1(2) xxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)      -------   aatttaaatatattaaaaataatcaaaaatattaagatacatttagacccgtctagtctgcttaaacacgcctaatgtccgtcttatccccttaataaaa  10284200           <-----------ARR10           <---------ARR11(1)          xxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)        <xxxxxxxxxxxxxxxxxxxxsmallRNA(se3)       >>>>>>>>>E2Fc                                                   --------->ARR14(2)       <xxxxxxxxxxxxxxxxsmallRNA(se3)                                  <---------ARR14(2)       >>>>>>>>>E2Fd                                                <------NtERF2       <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                       ------>NtERF2       <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                     <---------PCF2      <------NtERF2    ------>NtERF2                         <-------MYC2      --------->LBD16 ------->GAMYB                          ------->MYC3      ------>NtERF2<---------ALFIN1                       <---------ALFIN1                 --------->ANAC58     --------->ANAC58 --------->DEAR3(1)                 <---------At4g35610               --------->ANAC46     --------->ANAC46--------->MYB46(3)                  --------->At4g35610               --------->ANAC58     --------->ANAC58--------->DEAR4(2)                 ----------->RAV1(1)      <---------ANAC58 <--  <xxxxxxxxxxxxxxxxsmallRNA(i)                         xxxxxxxxxxxxxxxx>smallRNA(i)      --------->ANAC46 xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)              ---------->DOF2<---------DEAR3(1)     <---------ALFIN1 xxxxxxx>smallRNA(se3)--------->DREB2C(2)     --------->DAG2 <-------MYC3        <---------ANAC58 <-- --->DOF2xxxxxxxxxxxxxxxx>smallRNA(i)        ---------->DOF2 ------->MYC2     <----------DOF2  <-----   gcatagcccgccaaatctatcccaccgcctaatagaaccgattttaaaaaagtcaaagcagcacatgggcgcctatcccgctttcttgaacacaccccaa  10284300  Previous    Next  AGI:  At5g28295.1    Description:  unknown protein Range:  from: 10283286    to: 10283781    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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