Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                       ------>MYB46(1)                                     ------>MYB83                                   <---------MYB111(2)                                   --------->AtMYB61                                   <---------MYB55(2)                                   --------->MYB46(3)                                   <---------MYB111(1)                                  --------->ANAC46                                  --------->ANAC58                                  --------->ANAC58                                 ------>MYB83                                 ------>MYB46(1)                               <---------MYB55(2)                               --------->MYB46(3)                            <---------RAP2.6(3)  --------->GLK1(2)         ------>NtERF2  --------->ARR14(2)       --------->DEAR3(1)  <---------ARR11(1)       <---------ETT(2)  ------->TEIL             <---------ETT(1)  <---------ARR14(2)      --------->DEAR3(2) <---------CCA1(2)       --------->At4g35610  --------->DAG2 ------->ANAC46          <---------At4g35610 ---------->DOF2 ------->ANAC58       <---------ANAC58  <---------------AGL15                 --------->YAB1  ------- ------->ANAC58       <---------ANAC58  --------->AHL20(2)         <-----------HVH21       ---------- -----REM1(2)       <-----------GT1<---------MYB46(2)   <-----------HVH21    ----------->GT1  <------   cacgaatcttcaacgtttttttttgcctgccgacccaccaaactaaataaagtcaatttgtcacaaaaatgtcacaaaaatgaaaatttttagtaaagct  10282200                                                           <----------DOF2                     ----------->GT1                 <---------ICU4           ------->TEIL                            --------->GLK1(2)           --------->ARR14(2)                  --------->YAB1<------------------------ANAC81           <-----------GT1     --------->ARR11(3)  --------->ARR11(3) ---------->DOF2     <---------YAB1           --------->AHL20(2)                             -------- -->At4g35610   --------->ANAC46 ------>ZmHOX2a(2) <---------ARR11(3)                        <------- >DOF2     <---------ARR14(2)  <---------ARR11(3) --------->RVE1(1)                         <-------- ---At4g35610   --------->bZIP60(2)         --------->YAB1 <---------DAG2           ---------->DOF2   gagaaaagaaatgtatccacatcatgaaaaaatgatctataaactaaaataaaaatcttgacttttttttttttttttggtcttgttaaagctcaaatct  10282300       <--------ATHB1       <------------ATHB5       --------->YAB1       --------->ATHB51       <---------ICU4       --------->ATHB12       -------->ATHB1      <---------ATHB51      <---------YAB1      --------->ICU4      <---------ATHB12 --------->ANAC58              --------------->AtSPL8 --------->ANAC46              <---------------AtSPL8 --------->ANAC58              --------------->AtSPL3 ->ARR11(3)          --------->ANAC46 --ARR11(1)          --------->ANAC58    <---------AHL20(2)                          --------->ARR11(3) -CCA1(2)            --------->ANAC58    --------->AHL20(2)                 ---------->DOF2         <   ttcaagcaataattgaaaaatacacgaaaatgagaagtacccattaattgtttaagtcgattagacattacaaaacacaaaagattagttcttgagttcg  10282400                                                                              <------NtERF2                                                                             <---------DEAR4(2)                                                                             ------>NtERF2                                                                             <---------ATERF1(1)                                                                             <---------RAP2.3(1)                                                                             <---------RRTF1(1)                                                                             <---------ORA47(2)                  <---------MYB46(3)                                         <---------ERF1                 <---------At1g77200                                        --------->DEAR3(1)                 <---------DEAR3(1)                                         <---------RRTF1(3)           --------->DAG2                                      --------->GLK1(2)      <------ZmHOX2a(1)          ---------->DOF2                                      --------->ANAC58 <----------DOF2     <---------MYB59                                           --------->ANAC58<---------ANAC46    <-     --------->TOE1(3)                                     <------ZmHOX2a(1)<---------DEAR3(1)     <-     --------->TOE2(3)         <---------TOE2(3)      <---------HSFB2a(2)   <---------RAP2.3(2)    <-   -------->P  <-----------HVH21 <------ZmHOX2a(1)    --------->HSFB2a(2)   <---------RAP2.3(3)  ----  --------->MYB52(1)       --------->CCA1(2)         <---------LBD16       <---------ABI4(1)    ----- ---------MYB52(2)<---------DEAR3(2)--------->ALFIN1<---------LBD16    --------->MYB52(1)       -----   aaactaacctaaaaaagcgtcggtgagagatttgaggaatgtgggtttagcattttcgggaggagaagctataaaacggcggcgtttaggaggtagaagt  10282500           ---------->DOF2         <------ZmHOX2a(1)     <---------ANAC46  --------->ALFIN1 --------DREB2C(2) --------ANAC46                            --------->ANAC58 --------DEAR3(1)                   --------->ZAT2 ----->MYB52(1)                     <---------ZAT2      <-------TEIL                               <- ------>TGA1--------->DAG2         --------->GLK1(2)   --------->ALFIN1<----------DOF2           <--- ------>HVH21              ----------->GT1 --------->ANAC58   <<<<<<<<<TBF1                ----------   gacggtggagaggaaaaggaatcggaagatggtgaagaagctggttcgccatgagaggtgcttcttcttctctctttctctctctgtgtctctctgactg  10282600                                                                                            <--------                                                                   --------->ZAT6           ---------                                                                ------>ZmHOX2a(1)           <--------                                                            <---------ARR11(3)             --------->AHL20(2)                                                            --------->ARR11(3)       ----------->GT1                                                            <---------ARR14(2)      <---------TOE2(3)                          <---------ANAC46                  --------->ARR14(2)     <---------ICU4                          --------->ANAC55(2)              --------->RVE1(1)       --------->YAB1             <---------ZAT14                               --------->CCA1(1)      --------->ICU4             --------->ZAT18         <----------DOF2   ----------->TBP          --------->YAB1     ----------->RAV1(1)  --------->ANAC58             <---------AHL20(2)      <---------AHL20(2)    <----------ID1        <---------ANAC55(2)          --------->AHL20(2) <---------AHL20(2)--------- -----ZmHOX2a(1)          ----------->GT1            ----------->TBP     --------->AHL20(2)<---------AHL20(2) ------TOE2(3)    *TSS    --------->ANAC58         <-----------TBP<<<<<<<GRF7 --------->AHL20(2) ->HVH21     --------->ZAT14 ---------->DOF2  <-----------GT1 ----------->RAV1(2)<---------AHL20(2)   aggaaaacgacagagtttactgggagagacgtaaatcgactttgttattttctatatataaatatcctgacactattttatataataatgttattaaatt  10282700                                                                                                    <                                                                                                 ----                                                                                               <<<<<<                                                                                               <<<<<<                                                                                         --------->ATHB12                                  ----------->GT1                                        --------->ATHB51                              <---------AHL20(2)                                         -------->HAHB4                              --------->AHL20(2)  <---------WRKY12                       <---------ICU4                              <--------ATHB1      <---------WRKY38(1)                    <--------ATHB1                              --------->ATHB51   <<<<<<<<<<WRKY43                       <---------ATHB51        <----------ID1        <---------ICU4     <<<<<<<<<<WRKY26                       --------->ICU4      --------->MYB52(1)     --------->ICU4      <<<<<<<<<<WRKY38                       <---------YAB1 -AHL20(2)                   <---------YAB1    ----------->GT1                 --------->DAG2  <<<<<< >AHL20(2)                 --------->YAB1 <---------AHL20(2)        ----------->GT1----------->GT1  - -AHL20(1)                <---------YAB1 <---------AHL20(2)       ---------->DOF2 --------->ALFIN1 <- >AHL20(1)            ----------->GT1    --------->AHL20(2)   ---------->DOF2---------->DOF2 --------   atgtagaataacgccgaaaatgtatagtataataatttgttatttaaattggtcaattgatgtcaaaagaaagaaaaacaaaaggtggtaataattggtc  10282800     ----------->GT1    --------->ATHB12 ---------AHL20(2) ----->WOX13(1) <<<<WRKY43 <<<<WRKY26                                                                          <---------MYB46(3) <<<<WRKY38                <------ZmHOX2a(1)                                   <<<<<<<<<<<<<<<<<LFY -------->AHL20(2)      <------ZmHOX2a(1)                                     --------->ZAT18 --------ATHB12 <---------HSFB2a(2)      ---------->DOF2                      <---------ZAT14 --->GT1        --------->HSFB2a(2) ---------->DOF2                    --------->ZAT6----------->GT1   aattaatgagtgaaatttgtagaagaggaggacatttttaaagaaaagaattggtttatgtatggcataggtagcactagcacacagtggtcaaattggt  10282900                                                                                       --------->ANAC58                                                                                       --------->ANAC58                                                                                     ---------->DOF2                                                                                  <----------ID1                                                                      --------->MYB46(3)    ---------                                                                 --------->ZAT6 --------->MYB52(1)---              <---------TOE2(3)                         <---------AHL20(2)   --------->YAB1 ---------            ---------->DOF2        <---------ATHB12   <---------YAB1--------->MYB52(1)--------->DAG2   ttatgaactgggtttaaaggtatacagtttaagtcccatgaatacagttttctactattattttctaacacaacgactctaataacgaaaagccaagaaa  10283000    --------->YAB1                     --------->AHL20(2)               --------->YAB1              <    <---------ICU4                     <---------AHL20(2)      <---------ARR11(3)                  <-    <--------HAHB4                 --------->ATHB12          --------->ICU4 xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)   <---------ATHB12               <---------YAB1             <---------YAB1--------->AHL20(2)     <-- >ANAC58                      <----------DOF2             <-------TEIL <---------YAB1         <------ ------>TOE2(3)---------->DOF2<---------DAG2       <---------YAB1  <-----------GT1         --------->LBD16 >ANAC58<---------AHL20(2)<XXXXXXXXXXXXXXXXXXXXMIR407---------->DOF2 --------->YAB1       <---------ANAC46   acttaatcattttatccaaaagtcgaacaaaactttatgatttaaatgacattttgaaagttcatgatttttcatcataaatttgaaaacttgcgcatat  10283100  Previous    Next  AGI:  At5g28290.1    Description:  ATNEK3; kinase. Identical to Serine/threonine-protein kinase Nek3 (NEK3) [Arabidopsis Thaliana] (GB:Q8RX66); similar to ATNEK2, kinase [Arabidopsis thaliana] (TAIR:AT3G04810.2); similar to ATNEK2, kinase [Arabidopsis thaliana] (TAIR:AT3G04810.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO43033.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) Range:  from: 10278695    to: 10282618    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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