Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                  --------->O2                <---------O2          <---------REM1(1)          <---------ANAC46                ----------->GT1      --------->LBD16                     --------->LBD16     <---------ANAC46                    ------->GAMYB     <---------ANAC55(2)                <---------LBD16     <---------ANAC55(1)               -------->P     <---------ANAC58                  --------->MYB52(1)     --------->ANAC55(2)             --------->MYB46(3)                         --------->TOE2(3)     <---------ANAC58             --------->YAB1                              <---------YAB1 <------ZmHOX2a(2)  <---------ARR14(2)           ------->GAMYB                                  <---------TOE2(3)  --------->ARR14(2)           --------->YAB1  ---------->DOF2               <-----------GT1<-------- ------->AHL20(2)             --------->MYB46(3)                     --------->MYB52(1)     ---------   ataaaatccgtgttgtagacgtcttcttcacaaccatcatcaaccggagaaaagacattagagaagacatctaagggattaacattatcaactagatcat  10170300                        --------->DEAR3(1)     <---------ANAC55(2)     --------->At4g35610         <xxxxxxxxxxxxxxxxxxxxsmallRNA(se3)  <---------ICU4        ----------->RAV1(1) <----------DOF2      <---------ZAT18     --------->YAB1          --------->MYB46(3)              --- -ARR11(3)   ---------->DOF2             <------ZmHOX2a(2)  --------->YAB1                        <-- >ARR11(3)--------->TOE2(3)        <---------ANAC46   --------->YAB1 --------->MYB46(3)      <xxxxxxx   cgacttttgtaacatcaaagctagcgccttcgtcttgacttggatcatcatgtgaatcacaatcttcaacaacagctacaaaaacatttacatcgtcgat  10170400                                    <---------ANAC58                          <---------WRKY12                          <---------WRKY45                     <---------DOF5.7(2)                   --------->DOF5.7(2)            --------->YAB1            <----------DOF2<---------DOF5.7(2)    <---------ICU4            --------------------->WRI1           <---------YAB1        --------->ANAC58  <---------WRKY38(1)  --------->YAB1        --------->ANAC58 --------->DOF5.7(2)  --------->ICU4                                  <------       <---------LBD16  --------->TOE2(3)----------->GT1                                    <-------- ------>AHL20(2)   <---------MYB52(1)  <-------GAMYB            --------->LBD16             <--------HAHB4 -------AHL20(2)---------->ID1      <---------ANAC46            ------>NtERF2              <---------ATHB12 xxxxxxxxxxxxxxxxsmallRNA(se3)      <---------ANAC58          <---------LBD16            --------->WOX13(1)   tttatttgccacggctttgtcgttatcgtcaacgtcttgtgtgttgaaataatcatcgatgttctccgcgttggaaacaacatcatcaaatccatcattt  10170500                                                       <----------DOF2                                                      <---------ANAC58                                                      <---------ANAC46                                                      <---------ANAC58                                                     <-------TEIL                                                 <---------TOE1(2)                --------->YAB1                --------->ATHB12             --------->WOX13(1)               --------->YAB1     --------->TOE2(3)         <---------DAG2<---------ATHB12    <---------ICU4       --------->ANAC46    <---------YAB1   <---------YAB1        --------->ANAC58   <-----------HVH21                                   <----   --------->ICU4 <---------YAB1      <---------ARR14(2)                        ------>NtERF2   <---- --------->bZIP60(1)  ----------->HVH21 ------>ZmHOX2a(2)                <---------ICU4         ----- <---------bZIP60(1)<----------DOF2   --------->ARR14(2)             <-------TEIL      <---------YAB1 ---YAB1<---------AHL20(2)------>NtERF2<------ZmHOX2a(2)         --------->ANAC46 --------->MYB46(3) -ICU4 --------->AHL20(2)--------->ANAC58  --------->ANAC46<---------ANAC46     ----------->RAV1(1) -   ttgacatcattaaatccatcatctttgacgccaatttttggatccccatcataggtgcgttttgtagacgatacatcatcgccaacaacatcatagatag  10170600                                                            --------->ZAT18                                                           ------->GAMYB                                                           --------->DEAR3(1)                                                          --------->MYB46(3)                                                       --------->MYB46(3)                                                       <---------MYB55(2)                                                       ---------->DOF2                                                   --------->MYB46(3)                                                --------->YAB1                              --------->AtMYB61<---------ATHB12                           --------->RAP2.6(2) --------->ICU4   <----------DOF2           --------->AHL20(2)     <---------TOE2(3)  --------->ANAC58   --------->REM1(2)<---------ZAT18               --------->YAB1 --MYB83                --------->ANAC46--------------------->WRI1              <---------ANAC58 --MYB46(1)             --------->ANAC58<---------ANAC46 ------>MYB46(1)        <---------ANAC55(2) ------>GT1  <----------DOF2------>NtERF2--------->LBD16 ------>MYB83           <---------ANAC58    < -------->ATHB12      ---------->DOF2  <---------LBD16--------->ANAC46          <---------ANAC46    <   gtttattgacgaagtctttgacttgaaagccaccacaattctccgtgtaatcatccaccaagcgcccttttagtctcgaatttcgtaaacaattatacat  10170700                                                                                        <---------ANAC46                                                                                        <---------ANAC55(1)                                                                                        <---------ANAC58                                                                                        <---------ANAC58             <---------TOE1(1)                                                          <---------ANAC55(2)             <---------TOE2(1)                                                          --------->ANAC55(2)           <-----------GT1                                                          <XXXXXXXXXXXXXXXX          --------->ICU4                                                       --------->At4g35610        <---------ICU4                                                         <---------At4g35610     ------>ZmHOX2a(2)          ------------>CBF                               <---------ZAT2     --------->YAB1            --------->ANAC58                 <------------CBF    <---------ANAC58     ----------->GT1           --------->ANAC46               --------->AHL20(2)    <---------ANAC46 <---------YAB1 ----------->GT1--------->ANAC58           --------->ATHB12 <-----------HVH21 ---------TOE1(2)      <---------TOE2(3) --------->At4g35610  <---------AHL20(2)    <---------ANAC58 ---------TOE2(2)      --------->DAG2    <---------At4g35610 --------->AHL20(2)--------->ZAT2--------   cgtatgatcgtaattacgaggtaaaaaggttgcacacaatttctgcttaagtttagtccatgatttaattggactcttgtcagcttgcttgcgtgatttc  10170800                                     <---------AHL20(2)                                    <---------AHL20(2)                                    --------->AHL20(1)                                    <---------AHL20(1)                      <---------ANAC55(1)                      --------->ANAC55(2)                      <---------ANAC55(2)                      <---------ANAC58                      <---------ANAC58    <-----------HVH21                 <---------YAB1     --------->AHL20(2)                        <---------YAB1               --------->YAB1 --------->ANAC46                            --------->GLK1(1)               <---------ICU4<---------HSFB2a(2)                 ==============HOX2a_HOX2a              <---------YAB1 --------->HSFB2a(2)                 <------ZmHOX2a(2)      --------->bZIP60(1)<---------ARR14(2)                --------->YAB1 <---------GLK1(1) --------->ANAC55(2)  <---------ANAC46   --------->ANAC46 <---------YAB1<------ZmHOX2a(1) XXXXMIR835-3P--------->ICU4 ------>ZmHOX2a(1)  --------->ANAC58<---------ARR11(3) ->GLK1(1)------>NtERF2  --------->ARR14(2)     --------->ANAC58--------->ARR11(3) <-----------GT1   ttcacttgatgccaccatgatgatgcgtgtcctcgaaatttattcgtcacaagcgaaactataatagatcatcaggaactcttattaactccaaaatttc  10170900                   --------->ANAC58                   <---------TOE2(3)                   --------->ANAC58                <---------ATHB12              --------->WOX13(1)                            <---------ARR14(2)             <---------------AGL15                          --------->ARR14(2)            ------------>CBF                               --------->GLK1(1)            ----------------->AGL1                         --------->KAN4(1)          --------->ANAC58               <-----------GT1  <---------KAN4(2)          --------->ANAC58        --------->ANAC58        ---------->TaMYB80         <-------PIF5             --------->ANAC58      <------ZmHOX2a(1)                    <-------         ------->PIF5 ---------->DOF2------->TEIL     <---------TOE2(3)      <---------GLK1(2)   ----        --------->ANAC46   --------->GLK1(2)        --------->TOE1(2)  --------->ZAT6    <---------CCA1(2)   ttcaacatccacgagccaatcaaggaaagaatcgacacgaatttcaccatggaacttaggaatatccaacttaaaactagaatcccatctcatgtctttc  10171000                                                                                                   ==                   <---------GLK1(1)                                                              ===                   --------->GLK1(1)                                                              <--                 <------ZmHOX2a(1)                                                                ---                --------->ANAC58                                                                 ----           ----------->HVH21                                                                     <---          <---------WOX13(1)                           ------>MYB83     ----------->GT1          <---         <---------ANAC58      --------->ANAC46        ------>MYB46(1)  --------->At4g35610      ----         <---------AtLEC2  --------->AtMYB61 XXXXXXXXXXXXXXXXXXXX>MIR845A       --------->At4g35610--   --------->ARR11(3)     <---------MYB55(2)--------->GLK1(2)     <---------At4g35610            <--- ---DOF2 <---------ANAC58 --------->MYB46(3)------->TEIL          --------->At4g35610            ---- ------>DOF2    --------->ANAC58 <------ZmHOX2a(1)    --------->MYB52(1)<---------At4g35610      <---   aaagacatcttgcttgacaggaaatcaaaccaccaggaacgagatgaatctgataccaactgatagagagcggaagctaaatagcagacgagaacacaag  10171100                                 <---------ANAC58                             ------>ZmHOX2a(2)                            <------ZmHOX2a(2)     ==============================HOX2a_HOX2a     ===============================HOX2a_HOX2a     <------ZmHOX2a(1)     --------->ARR11(3)  <---------HSFB2a(2)      <---------ARR11(3)  --------->HSFB2a(2)      --------->ARR14(2) ===========HOX2a_HOX2a    <---------AGP1 ===========HOX2a_HOX2a    ------->TEIL                                             <---------DEAR3(2) ----ZmHOX2a(2)            <---------ARR14(2)                        ================================ ------>GLK1(1)            <-----------ARR10                         =====================HOX2a_HOX2a ----->ARR14(3)           <---------ARR14(1)                         ====================HOX2a_HOX2a ------ARR14(2)          xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)     <---------TOE2(3)<---------MYB46(3) ------ARR14(3)       --------->MYB52(1)                         ---------->DOF2   ------>ZmHOX2a(2) ----->ARR11(3)     --------->ANAC58                            <---------ATHB12  <------ZmHOX2a(2) ---->ZmHOX2a(2)    <---------MYB52(2)                     --------->ANAC58      <---------ARR14(2) ------AGP1         --------->ANAC58                       --------->ANAC58      --------->ARR14(2) ----->ARR14(2)--------->ARR14(2)<---------ANAC46        ---------->DOF2 --------->DAG2         ===== ------ARR11(3)<---------ARR14(2)<---------ANAC58  --------->MYB52(1)<------ZmHOX2a(1)          <----   atctctaggagaactcggattcacgaacggatcttgcttacaacgtcgaaacttaacgaagaagcaataaaggataaggtcgagatcggttccaagagat  10171200  Previous    Next  AGI:  At5g28190.1    Description:  unknown protein Range:  from: 10167854    to: 10170700    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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