Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100       <---------bZIP60(1)     --------->bZIP60(1)     <---------TGA2(1) -------ANAC58              --------->GLK1(2)                                              <---------MYB46(3) -------ANAC58         --------->LBD16                                   <---------ANAC46  --------->ABI4(2) -------ANAC46       <---------LBD16                         --------->HSFB2a(2)    --------->WOX13(1) ---->MYB55(2)   --------->ANAC58             <---------MYB52(1)      --------->ANAC46    <---------AtMYB61 -----MYB46(3)   --------->ANAC58            <-----------HVH21   <---------KAN4(2)<---------YAB1 ----AtMYB61   ---------->DOF2               <-----------TGA1<---------HSFB2a(2) --------->TOE2(3) -DEAR3(1)  <---------HSFB2a(2)     ------>ZmHOX2a(2)       <---------LBD16     --------->YAB1    ---   gtttgtgatgtaatcgagaaagccacggagaagctcgatctcgtcttcgtcagtccatagtctctggaataaacgtcgtgaatcatcaatcggtggtctc  10038600                                                                        =============================                                                                        ------>ZmHOX2a(2)        <---                                                                       <------ZmHOX2a(2)         ----                                                                       ==============================                                                                      <---------ARR14(2)      <------                                                                      --------->ARR14(2)      <------                                                                     <------NtERF2         <---------ARR14(2)                                      --------->ARR14(2)            <---------ATERF1(1)    --------->ARR14(2)                       ----------------->AGL1                       <---------MYB46(3)     <---------MYB52(1)                       <------NtERF2  <---------ARR14(2)          <---------LBD16        <---------MYB46(3)                      --------->ABI4(2)<---------At4g35610      <---------DEAR3(1)       <---------DEAR3(2)                      ------>NtERF2   --------->GLK1(2)        --------->SPL7           <---------DEAR3(1)               <---------SPL7        <---------GLK1(2)         <-------TEIL           ------------>AtMYB77              --------->YAB1  <---------YAB1              <-----------RAV1(2)        ----------->HVH21 ------>At4g35610--------->SPL7   ------>ZmHOX2a(2)     --------->CCA1(2)  <---------LBD16<-------GAMYB   tgatgaacgatttcagtcatacggtgccatttctgatcggaatctgatggaattgaagctacaggtacggcggatccagcgggaagagcgacggttacgg  10038700                           <---------HSFB2a(2)                           --------->HSFB2a(2)                       --------->ZAT2                       --------->GLK1(1)                       <---------GLK1(1)                           --------->ARR14(2)                       --------->At4g35610                      <---------HSFB2a(2)                       <---------ZAT2                           --------->HSFB2a(2)                  <---------LBD16       <---------ANAC46       <---------LBD16                  <------NtERF2  --------->ICU4     <---------GLK1(2)                 ------>NtERF2   <---------YAB1     <---------ARR14(3)              <-----------HVH21  <---------ATHB12   --------->ARR14(3)        --------->ATHB12  <---------LBD16           <-----------ARR10------>ZmHOX2a(2)       <---------YAB1<------NtERF2--------->ATHB12  --------->ARR11(3)             <---------YAB1     <------ZmHOX2a(1) <---------At4g35610          <---------ARR14(2)           ------>ZmHOX2a(2) ------>ZmHOX2a(1)--------->ATERF1(1)  <---------LBD16      <---------ARR14(2) --------->ARR14(2) --------->LBD16 <---------ATERF1(1)  --------->MYB52(1)    --------->ARR14(2) <---------ARR14(2) =======HOX2a_HOX2a --------->LBD16  --------->WRKY12<------ZmHOX2a(2)     <---------LBD16 ------ARR14(2) <---------DEAR3(1)-------->ATHB1    <---------ARR11(3)     ------>ZmHOX2a(2) ----->ARR14(2) --------->DEAR3(1)<---------ICU4    --------->ARR14(2)   --------->ARR14(2) =======HOX2a_HOX2a--------->DEAR3(1)----------->HVH21------>ZmHOX2a(2)  <---------ARR14(2) ---TOE1(3)  <---------ANAC58  --------->GLK1(1)    --------->AGP1 <---------ARR14(2) ---TOE2(3)  <---------ANAC58  <---------GLK1(1)   <---------CCA1(2) <---------LBD16   ------>ZmHOX2a(2)   ttcctgaggatgatttcgtcgccggagctctggaaatcattgacggagaattcagatcttcgtattctggatcgggatcgggatcgtgatcgtcgtcttc  10038800                                                                             --------->DEAR3(1)                                                                             --------->RAP2.3(3)                                                                            <------NtERF2                                                                            --------->ATERF1(1)                                                                            --------->ORA47(2)                                                                          --------->RRTF1(2)                                                                          --------->DREB2C(2)                                                                          --------->RAP2.3(2)                                                                          --------->RAP2.3(3)                                                                          --------->RAP2.6(2)                                                                          --------->ATERF1(2)                                                                          <---------DEAR3(1)                                                                          --------->DEAR3(1)                                                                          --------->RRTF1(3)                                                                         --------->RRTF1(1)                                                                         --------->RAP2.3(1)                                                                         --------->ATERF1(1)                                                                         --------->RAP2.6(1)                                                                         --------->DEAR4(2)                                                                         --------->ORA47(2)                                                                        ------>NtERF2                                                                        <---------ATERF1(1)                                                                        --------->ABI4(1)                                                                       --------->AtMYB61                                                                       --------->DREB2C(2)                                                                       <---------ALFIN1                                                                       --------->ANAC46                                                                       ------->GAMYB                                                                      --------->DEAR4(2)                                                                      --------->DEAR3(2)                                                                      --------->MYB46(3)                                                                      --------->ATERF1(1)                                                                      <------NtERF2                                                                     <---------ATERF1(1)                                                                     --------->ABI4(1)                                                                     ------>NtERF2                                                                    --------->DEAR3(1)                                                                    <---------ALFIN1                                                                  ------>NtERF2                                                                  <---------ATERF1(1)                                                                  <-----------HVH21                                                                 --------->DEAR3(1)                                                                 ------->GAMYB                                                                 --------->ANAC58                                                                 --------->ANAC58                                                                 --------->ANAC46                                                                 --------->DEAR4(1)                                                                 --------->RAP2.6(2)                                                                --------->ATERF1(1)                                                                --------->MYB46(3)                                                                <------NtERF2--------->RAP2.3(2)                                                                --------->RAP2.3(1)                                                               <---------ATERF1(1)         --------->CCA1(2)                                                               ------>NtERF2--------->RAP2.3(1)                                                               --------->ABI4(1)          --------->ARR11(3)                                                              --------->AtMYB61           <---------ARR11(3)                                                              <---------ALFIN1------>NtERF2<------ZmHOX2a(2)                                                              --------->DEAR3(1)          <---------ARR14(2)                                                             --------->MYB46(3)           --------->ARR14(2)                                                            --------->LBD16 --------->DEAR4(2)                                                            ------>NtERF2--------->ERF1<---------HSFB2a(2)                                                   ------>ZmHOX2a(1)--------->AtMYB61  <-------------                  <-----------GT1        <---------GLK1(2) --------->ANAC46------>NtERF2  <---------AGP1           <---------ANAC46        --------->ARR14(2)      --------->ANAC58--------->ABI4(1)------>ZmHOX2a(2)       <------MYB46(1)             <---------ARR14(2) ------>ZmHOX2a(1)--------->DEAR3(1) --------->AGP1       <------MYB83     <---------ARR11(3)      ------>ZmHOX2a(1)--------->DREB2C(2)   --------->HSFC1(1)       <---------MYB46(3)       <---------TOE1(2) <---------ALFIN1--------->ABI4(1)    --------->HSFB2a(2)    <---------MYB52(1)  --------->ARR11(3)  <-----------GT1--------->ANAC58<---------ATERF1(1)-------   ggcttcgtttggttcgggtataacaacatcttcgtcggattcagtttctcctcctcctcttccgccaccgccaccgccgccgtcttcttctagatctggt  10038900                                                                                          ---------->DOF2                                                                                        --------->LBD16                                                                                     ================                     <---------ANAC46                                                <------ZmHOX2a(2)                 <-----------HVH21                                                  --------->AGP1     --------->LBD16 --------->O2                                                   <---------ARR14(2)   --------->At4g35610                                                              --------->ARR14(2)   <---------LBD16   <---------O2                                                   --------->ARR11(3)   <---------At4g35610           ------>NtERF2                         <--------P  --------->At4g35610 --AGL15  <---------GLK1(1)   --------->At4g35610  <---------ANAC58 <---------HSFB2a(2)<---------HSFB2a(2) ---->GT1 --------->GLK1(1) ------>ZmHOX2a(2)      <---------ANAC58 --------->HSFB2a(2)--------->HSFB2a(2)   gattcagcggagaaatcagtgtcacgttgatccgatgccatgagaaaaacgtagcgagagagaaatttttctggtagatcgaatcagatccagaaagaag  10039000                                               <---------ANAC46                                              <------MYB46(1)                                              <------MYB83                                            <--------P                                           <---------SPL7                                          <---------MYB46(3)                                       <------MYB83                                       <---------MYB46(3)                                       <------MYB46(1)                     --------->ANAC55(2)  --------->MYB55(2)                       <---------LBD16                     <---------ANAC55(2) <---------AtMYB61                         <---------ANAC46               <---------WOX13(1)     <---------AtMYB61                           <---------LBD16              <------------CBF        <---------DEAR3(1)                       <---------HSFC1(2)      <-------TEIL--------->ARR11(1)  --------->ALFIN1           <---------At4g35610     *TSS    <------ZmHOX2a(1)      <---------ANAC46       <------------CBF   --------->MYB52(2)   <---------ANAC58 <---------LBD16 <---------ANAC58     --------->GLK1(2)    --------->MYB111(1)   <---------ANAC58--------->CCA1(2)<---------ANAC58----------->GT1           ----------->ARR10     < ===================HOX2a_HOX2a    <---------MYB46(3)    <---------ARR14(2)  <--------P           ---   gaattgggttcacgaggattgatacgggtttgttttttgggtggtggtagggtatggagaatattggagatgagtaggggtagtttcgggattttaagag  10039100                                                                                    <----------DOF2                                                                                 <---------ANAC58                                                                                 <---------ANAC46                             --------->ANAC58                                    <---------RAP2.6(2)                       <-------GAMYB                                             <---------ANAC58                      <---------MYB46(3)                                     <-------GAMYB            <---------TOE2(3)--------->ANAC46                               --------->MYB111(1)           --------->MYB52(1)--------->ANAC58                               <---------MYB46(3)      <---------YAB1 <---------ANAC46                                       --------->ALFIN1    --------->YAB1   <---------ANAC58                                       <-----------RAV1(1)    <---------ICU4   <---------ANAC58                                       --------->MYB52(2)    -------->HAHB4   <---------RAP2.6(2)                     --------->LBD16--------->MYB55(2)   --------->ICU4<-------GAMYB                   ---------->ID1             --------->MYB111(2) <----   <---------ATHB51 <---------LBD16            --------->MYB52(2)<----------DOF2<---------LBD16 <---- ---------YAB1  --------->ALFIN1      --------->PCF5     <-----------GT1   <--------P           <---- -------->GT1   <-----------RAV1(1)--------->ALFIN1  <----------DOF2      <-------GAMYB    <---------REM1(1)   ttgtaattatgactaagggtgttgcggttgcaggcaagtggtccagtgtttgtttcttttacccgtgctttgtttgggttgttgcggttttagttgaagc  10039200                                     ------>NtERF2                                     --------->RAP2.3(1)                                     <------NtERF2                                    ------>NtERF2                                    --------->LBD16                                   <---------DEAR3(1)                                        <-------                                  <---------LBD16                                            --------                                 --------->DEAR3(1)                                       <---------ANAC58                                 ------->GAMYB                                            <---------ANAC46                                <------------AtMYB77                                      <---------ANAC58                            --------->LBD16            <---------ETT(2)                <---------MYB52(1)                           --------->ANAC58           --------->SPL7                 <---------ZAT6           ---------->DOF2 --------->ANAC58        <---------ANAC58                  <-----------RAV1(1) -----ANAC58               --------->ANAC46     --------->DAG2                   <---------ZAT14 -----ANAC58           --------->ETT(2)        ---------->DOF2                   --------->ZAT14 -----ANAC46    <---------WRKY12--------->MYB46(3) <---------ANAC58           <---------ANAC46      -   gtgatcatgtgtttaaagtcaatggtctaccgcaaccgcggcgaaacagaaaagcgttcgacaaacttgattttgttattctgtgtactgttgcgtttct  10039300                            <------MYB83                          <---------WOX13(1)        <---------TOE2(3)                        --------->ATHB12            <---------YAB1                     <---------ANAC46          <---------MYB46(3)  <-----------HVH21<-------GAMYB    <---------MYB52(1) --------->ANAC46 --------->ALFIN1 <-------GAMYB<-------GAMYB --ARR14(2) <-----------GT1 <------MYB46(1)   <---------ANAC46               --------->DAG2 ->ARR14(2) --------->MYB52(1)    <-----------RAV1(1)                       ---------->DOF2 -------------->AtSPL8 <---------YAB1      ----------->HVH21        <---------YAB1                ---   tcaacgtcccatattaacgggtgttgtgattggtgactgttgtttatgacggttaagaatgtttttagagattatagaaaaagcgattagagaaaatgcg  10039400                            --------->AHL20(2)                          <---------------AGL15                          --------->TOE2(3)  <---------YAB1                          <----------DOF2  ----------->GT1                     <-------GAMYB     --------->AHL20(2)                                        <---              ---------->DOF2<---------AHL20(2)        ----------->GT1                        <------          --------->YAB1  --------------->AGL15     <------ZmHOX2a(1)                    <----------DOF2         ----------->GT1  =========================================================================== --------->TGA2(1) --------->ALFIN1    <---------AHL20(2)                             <-----------GT1 --------->bZIP60(1)----------->GT1    --------->AHL20(1)                         <---------AHL20(2) <---------bZIP60(1)<---------MYB46(3)--------->AHL20(2)                          --------->AHL20(2) -------->HVH21 --------->DAG2   ----------->GT1  <---------TOE2(3)              --------->AHL20(2)--   atgacataacaatgaaaaaaggtggttactttaaattgaaaaaaattgttataaggaaggaatataagagattagataacatataaaattacttttacta  10039500  Previous    Next  AGI:  At5g28040.1    Description:  transcription regulator. similar to transcription regulator [Arabidopsis thaliana] (TAIR:AT3G04930.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO43009.1); contains InterPro domain Protein of unknown function DUF573 (InterPro:IPR007592) Range:  from: 10037273    to: 10039005    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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