Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                               <-----------GT1                        <---------ANAC58 <---------ZAT18                        <---------ANAC46 --------->ZAT14                  --------->ATHB12       <---------ZAT14                <<<<<<<<<<<<<<<<<LFY     --------->ZAT18                >>>>>>>>>>>>>>>>>LFY  --------->At4g35610                                   ---------               --------->ANAC46    <---------ATHB12                                      --------->ANAC58              <-------TEIL--------->ALFIN1                                              --------->DAG2             --------->CCA1(2)    ------>MYB83  --------->YAB1                         ---------->DOF2 ---------->RAV1(1)     <---------ANAC58------->GAMYB      <---------ARR11(3)    --------->YAB1 ->YAB1     --------->ARR14(2)    ------>MYB46(1)          --------->ARR11(3)    ----------->GT1    < >MYB46(3)  <---------ARR14(2)   --------->WOX13(1)    ---------->DOF2    <----------DOF2--------->ANAC58   aacaacattgttcagatacaccattggtgtgttaccaatcaactgcacaaacatagaaaaagattttagacatgttctttgtatcataaaaaagcaaagt  10028100                                                                      <------MYB83                                                                  <-----------RAV1(1)                                                            ------>ZmHOX2a(2)                                                           <------ZmHOX2a(2)                                                          --------->ARR14(2)                             --------->ZAT14              --------->ARR11(3)                             <---------ZAT14              <---------ARR14(2)                         <-----------GT1                  <---------ARR11(3)                        <---------YAB1                  --------->DEAR3(1)       --------->HSFB2a(2)                      <---------ICU4                --------->MYB46(3)<------MYB46(1) ->DOF2              <---------YAB1                --------->ANAC58  <---------AtMYB61            <-- -------TEIL         --------->ICU4                --------->ANAC58 <--------P   <---------HSFB2a(2)   gatacatatataagaaattagagattattacttcagtgatatcgttcttgatcaagcaccgatcttccatgttggtctgttttctgaaactattgaaaaa  10028200               <---------MYB111(1)               --------->MYB46(3)              ------>MYB46(1)              ------>MYB83            <---------MYB111(1)       <---------ANAC58       <---------ANAC58<----------ID1                --------->TOE1(3)  --------->GLK1(2)      --------------->AtSPL8                         --------->TOE2(3) <---------GLK1(2)      <---------------AtSPL8                      --------->YAB1  <-------TEIL              --------- ---------------AGL3---------->DOF2              <---------ATHB12--------->CCA1(2)---------->DOF2   tcaatatttgggtaccaactactaaagaacaaaatggatttatgaagtccaataaccatagaataagattcaagaatctagacacaaagcacaaaatact  10028300                  ------->GAMYB               --------->MYB52(1)            --------->At4g35610                <-------TEIL    <---------WRKY12                   --------->ANAC46    <---------WRKY38(1)                --------->ANAC58            --------->AHL20(2)    <---------WRKY45                   --------->ANAC58   <---------ICU4----------->GT1   --------->WRKY18(1)      <-----------GT1   --------->CCA1(2)    <---------AHL20(2) >ARR14(2)  <---------At4g35610   <---------ZAT18       --------->GLK1(2)            --------->YAB1--   caatggtcaaagtttgctaacagactctatttacaatgcacaagtaagattcaagaacaatcttggcaattttttggttatattgtttcataactaaaat  10028400                                           --------->YAB1                                           -                                  <----------ID1                           --------->AHL20(2)      <-                              --------->CCA1(2)       ---------->DOF2  ----------->GT1        ------- ------->AHL20(2)     ---------->DOF2     --------->AHL20(2) ----------->GT1                  -------   ttttaatatggaacttctaaactctaaagtagataagagacaaaataaaaatttagtaaagaacagtgaaaactagataaatttgataccaaaatcaaga  10028500                                                        <---------ANAC58                                                    <----------DOF2                                                 ------->TEIL                                                 <---------TOE1(2)     <---------YAB1                                               <---------SPL7        -------->ATHB1                                              <---------ANAC58       <---------ICU4                                              <---------ANAC58       <--------HAHB4        --------->ZAT6                       --------------->AtSPL3  --------->ATHB51 -------->YAB1                               <---------------AtSPL3  --------->ATHB12 --------YAB1                                --------------->AtSPL8 --------->ICU4               ---- -->ANAC58                                --------->DAG2<---------ANAC46                         <--- -->ANAC58      --------->YAB1     *TSS  ---------->DOF2<---------ANAC58         <----------ID1 <----   aatgatagtaagactaaatcagaacgaacaagaacaaaaaaaaaaaagtcgtacctttgcgtttaaacgaattattagtgaagaagacaaggctgtattc  10028600                                        --------->ZAT18                                        <---------ZAT14                                      --------->ZAT18                                      <---------ZAT14                                      --------->ZAT14                                      <---------ZAT18                                   <---------ANAC46                                  --------->ALFIN1                                  <-----------RAV1(1)                                 ------->MYC3                                                     ---                                 ------->MYC2                                                   <----                                 <-------MYC2                                                <-------       <-----------TBP           <-------MYC3--------->ZAT14                                ---------     <------ZmHOX2a(1)        <---------ANAC58                                     <---------YAB1---- ----------->AGL15            <---------ANAC58                                   <---------ICU4<----- ------------AGL15            <---------AtLEC2                                  --------->ICU4 ------ -------------AG          <----------DOF2  --------->ANAC46                     <---------YAB1-------   tagattaggatatatagagactaccctactttgcatgtggtgcacactgaacgatgttgaagtatgaagacgagtttatgtcatcattcttgtataataa  10028700                                                                                <---------ARR14(2) ------>TOE2(3)                                                                 --------->GLK1(2) -----TOE2(3)                                                                   --------->ARR14(2) --AHL20(2)                         <---------ANAC58                            --------->ARR11(3) >YAB1                              --------->ANAC55(2)                 --------->AHL20(2) ------->GT1                        <---------ANAC46               <---------YAB1   <---------At4g35610 ----ICU4                           <---------ANAC55(2)          ----------->GT1<---------ARR11(3)  - --->YAB1                   ---------->ID1            <---------ATHB12  <---------AHL20(2)        <-- -->ICU4        ---------->DOF2     <---------ANAC58  <---------ATHB51<---------YAB1--------->At4g35610   tgttaaaaatttgacatctaaagagtttttgtcatattgcgtaatgagagcatccaatagttgtattttgttattaaaacaaaatctgcagataaacatt  10028800                                                               <---------ANAC58          <---------AHL20(2)                                   --------->ANAC55(2)          --------->AHL20(2)                                   <---------ANAC55(2) --------->AHL20(1)         --------->YAB1              <----------DOF2           <---------ANAC58   --------->YAB1        <---------YAB1               ------>ZmHOX2a(1)       <-----------GT1      --------->AHL20(2)      --------->YAB1              ---------->ID1      --------->YAB1        <------ZmHOX2a(2)      <--------HAHB4        <---------AHL20(1)        <---------ICU4     --------->HSFB2a(1)     <---------YAB1         <---------AHL20(2)       <---------ATHB12    --------->MYB46(3)--------->ANAC46 -------->ZAT6              --------->AHL20(1)     --------->YAB1        <---------HSFB2a(1)       <- ---------GT1               --------->AHL20(2)    --------->ICU4        --------->SPL7 <-----------GT1   taacactattattaaaatgtttaagagcattatattgtccttttctctagtactaatcatgtgttacttatccgaacgatcgaataatattacacctaag  10028900                                                                      ===============================                                                                <---------DAG2                                                            <-------MYC2                    ------->GAMYB                           <-------MYC3                   --------->MYB46(3)                       ------->MYC2 <---------AHL20(2)            --------->AHL20(2)                              ------->MYC3--------->AHL20(2)            <---------AHL20(2) --------->TOE2(3)         ------->GAMYB<---------------AGL15      ----       <------ZmHOX2a(2)  <---------ARR11(3)       --------->YAB1     --------------->AGL15<---------ANAC46 ----------HVH21 <-----------GT1    --------->ZAT6<---------YAB1<----------DOF2           ---------->ID1   tggtcacagatcaattttttaaccacatgattttcttaacacaaatcaaattttcataaccacatgctttttcattttatagaatacaatgtgtcgttat  10029000  Previous    Next  AGI:  At5g28020.1    Description:  ATCYSD2 (Arabidopsis thaliana cysteine synthase D2); cysteine synthase. similar to cysteine synthase, putative / O-acetylserine (thiol)-lyase, putative / O-acetylserine sulfhydrylase, putative [Arabidopsis thaliana] (TAIR:AT5G28030.2); similar to cysteine synthase, putative / O-acetylserine (thiol)-lyase, putative / O-acetylserine sulfhydrylase, putative [Arabidopsis thaliana] (TAIR:AT5G28030.1); similar to O-acetylserine(thiol) lyase [Brassica juncea] (GB:CAA71799.1); contains InterPro domain Cysteine synthase K/M; (InterPro:IPR005856); contains InterPro domain Pyridoxal phosphate-dependent enzyme, beta subunit; (InterPro:IPR001926); contain Range:  from: 10026187    to: 10028535    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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