Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                       --------->TOE2(3)                                     --------->AtMYB61                                    --------->ANAC46                                  <---------ALFIN1                            <---------ARR11(3)                          <---------MYB52(1)                         <-------GAMYB                       <---------TOE1(3)                       <---------TOE2(3)  --------->MYB46(3)                        ---------->DOF2 -         --------->At4g35610--------->ARR11(3)                                   --------->TOE2(3)  - --------->DOF2       <---------At5g28300 <---------ATHB12   <----------DOF2  <---------GLK1(2)     -   tttaaagaattagctacaaacatttacggttatcttccacctcaaccattgttaacagttagacttttatgaagtcaacaaattcttaaagacaattggc  10004300                                                                                                 ----                                                                     <------MYB83  --------->AHL20(2)                                                                     <---------ANAC58            ----                                                                     <---------ANAC58            ----                                                                     <------MYB46(1)         --------                                                     <---------AHL20(2)        --------->AHL20(2)----                                                    --------->AHL20(2)         <---------AHL20(2)----                                                    <---------AHL20(2)    <---------MYB59    <------- -------->ANAC58                                    <---------AHL20(1)   ----------------->AGL1  <--- -------->ANAC46                                    --------->AHL20(1)  ------>NtERF2       <-------- -------->ANAC58 <---------AHL20(2)         ------>NtERF2           <-----------RAV1(1)     <--------   aaacgcaaaatttagtcattttatccaaaattctaaactgaaacggagccaaaataaaattcagttttatttggtgcctaatttataaaatccaataata  10004400                                                                       --------->ARR14(1)                                                                       --------->CCA1(2)                                                                      --------->ARR11(1)                                                                      --------->ARR14(2)                                                                      <---------ARR14(2)                                                                    ----------->ARR10                                                                 <-------MYC2                                                                 ------->MYC3                                                                 ------->MYC2                                                                 <-------PIF5                                                                 ------->PIF5                                                                 ------->PIF4                                                                 <-------MYC4                                                                 <-------MYC3                                                                 ------->MYC4                                                                 <-------PIF4                                                                --------->ANAC58                -----                                                                --------->O2                    -----   ------->GAMYB                                                <---------TGA1a              <------- ----->ANAC55(1)                                                --------->bZIP60(2)          -------- ----->ANAC55(2)                                                --------->ANAC58      <-------TEIL ----->ANAC46                                                   --------->ANAC55(2)  --------->CCA1(2) ->YAB1                                                         <---------ANAC55(2) <---------ARR14(2) ----->ANAC58                                          --------->CCA1(2) --------->ANAC58    <------- ----->ANAC58       ------>MYB83                      <---------ARR14(2) --------->ANAC58--------->ANAC46 -ATHB1             ------>MYB46(1)                   --------->ARR14(2)<-------TEIL--------->ARR14(2) ------ANAC55(2)  <---------MYB59            <---------AHL20(2) --------->TGA1a   ----------->ARR10 -ATHB12         --------->MYB46(3)          --------->AHL20(2) <---------O2  <---------ZAT2 -------- -ATHB51    <---------HSFB2a(2)             --------->AHL20(2) <-------TEIL   <---------At4g35610  <-   cgtaacccacaaatctcgaaccaaactataccaaagaatacccaaaattaatatcagatttgaggcacgtgagatacgcctgctaagatacacacagctc  10004500                                                   ------------>CBF                                           --------->TOE2(2)                                           --------->TOE1(2)                                    <---------ARR11(3) ---->ANAC58                      <---------HSFB2a(1) ---->ANAC58                      --------->HSFB2a(1)          <----------DOF2             <---------DAG2 --ZAT2                           --------->HSFC1(2)          <---------ANAC58             <--------- ->At4g35610           --------->ANAC46 <-----------GT1       <---------ANAC58       ------>ZmHOX2a(2) --At4g35610          ---------->ID1--------->ARR11(3)    <---------ANAC58          <------ZmHOX2a(2) ->ZAT2   ------>ZmHOX2a(1)     ---------->DOF2<------------------------ANAC81   <---------YAB1 --------GLK1(1)  <----------DOF2 <---------HSFC1(2)      <---------ANAC58<---------MYB52(1)   gaaatctgagtccttctcttctttttcgccatcggaaagttcttaccttcgatttcaatttcttgctttcttctcagttcgtcacgatcggagctttttg  10004600                                         <---------MYB52(1)                     ------>ZmHOX2a(1)<---------LBD16                                          ------   ------>ZmHOX2a(2) --------------->AGL15                       --------->TOE2(3)             <-----   =========================HOX2a_HOX2a --------->LBD16      <---------GLK1(1)            --------->LBD16  <------ZmHOX2a(2)  <---------------AGL15<--------P    <---------ANAC46                 <---------HSFB2a(2)  ==========================HOX2a_HOX2a--------->LBD16  <---------ANAC58                 --------->HSFB2a(2) -DOF2         <---------ALFIN1 --------->ARR11(3)      <---------ANAC58     --------->GLK1(1) ------   tccgatctcaaatgcccaaactcctccatttagttatcttcccggtagcatctaagtagcttgaaatccctaatatcggagttgctctctcccagaaaat  10004700                                                 <----------TaMYB80                                                 <------ZmHOX2a(2)                                                 --------->HSFB2a(1)                                                --------->ARR14(2)                                                <---------ARR14(2)                                     <----------DOF2                                   <------NtERF2<---------ARR11(3)                                  ------>NtERF2 --------->ARR11(3)                                  <---------ERF1<-----------ARR10                                  <---------RAP2.3(1)                                     <------NtERF2                                 --------->ATERF1(2)                                --------->ARR14(2)                                 <---------RAP2.3(3)                         --------->ALFIN1                                 <---------RAP2.3(2)                         <---------DEAR3(1)                                 <---------RAP2.6(2)                         <---------ANAC46                                 <---------DEAR3(1)                         ------>NtERF2--------->LBD16                                 <---------ANAC58<---------HSFB2a(1)        --------->ATERF1(1)                                 <---------ANAC46<---------GLK1(1)          <---------LBD16<---------ANAC46                                 <---------ANAC58--------->GLK1(1)          <------NtERF2------>NtERF2                                --------->ATERF1(1)              --------->LBD16   <---------GLK1(1)           <---------MYB52(2)   --------->RAP2.6(3)     <---------ZAT18    <---------ATERF1(1) ------          --------->ANAC46      <------NtERF2   <---------ARR11(1)         --------->DEAR3(1)--------          --------->ANAC58     <---------ERF1   --------->ARR14(3)        <---------DEAR3(1)---------          --------->ANAC55(2) <---------DEAR3(1)<---------ARR14(3)       <---------LBD16--------->ANAC46          --------->ANAC58 <---------AtMYB61   <------NtERF2     --------->At4g35610<---------ARR14(2)       <-------TEIL      <----------DOF2       <---------ARR14(1)------>NtERF2 <------NtERF2--------- --->GLK1(2)            <---------ANAC58       <---------CCA1(2)--------->ANAC46<---------AtMYB61  -- ----ARR11(3)           <---------ANAC58    <---------LBD16     --------->DEAR3(1) --------->GLK1(1) --->ARR11(3)--------->MYB52(1)<---------ATERF1(1)------>ZmHOX2a(2)--------->DEAR3(1)  <---------LBD16   ctcgagaggttcaagtaacgaaaatggctttggtggcggctttagaggcggatcttcgcgctctctccgccgaagcgcggcggaggtatcccgccgtgaa  10004800            --------->ANAC58            --------->ANAC55(1)            --------->ANAC55(2)            --------->ANAC46         <---------ZAT2      --------->DEAR3(1)     --------->ATERF1(1)     <------NtERF2    --------->ZAT2    --------->At4g35610                                                                      <-------TEIL    <---------ZAT2  ------>ZmHOX2a(1)                                                    <---------TOE2(3)    ------>NtERF2 --------->YAB1                                                    --------->ATHB12    <---------At4g35610                                                             --------->YAB1   <---------ARR14(2)                                                               -------->ATHB1   --------->ARR14(2)                                                               <---------ICU4  --------->ATERF1(1)---------->DOF2                                               --------->ICU4 ---->DOF2  <---------ANAC55(2) --------->GLK1(1)                                  <---------YAB1 --->HVH21  --------->ANAC58    <---------GLK1(1)                                  <---------ATHB12 >At5g28300--------->ZAT18    <------ZmHOX2a(1)                                  --------->YAB1 >LBD16  --------->ZAT2<---------TOE2(3)                 <-------GAMYB         --------->ZAT14 --------------------->TaNAC69(2)     <---------ALFIN1  --------->ALFIN1    <---------At5g28300   agacggagccgagcacgcaatcctaaaggttaggatttctccacagtaatgtacaagtgtgttgttcgagcttgaattcactgtaatcattgagattcaa  10004900                                <-----------GT1                           <---------YAB1                          <---------AHL20(1)                             <---------ZAT2                          <---------AHL20(2)                             <---------At4g35610                          --------->AHL20(2)                             --------->ZAT2                         --------->YAB1                                  --------->At4g35610               <---------AHL20(2)     <----------DOF2                  <---------ZAT18   attggtgtttgttttagttaattcgcattataattttccactttagactctaaaattgaattgttgaactcagtgagcttggagaatggatagcatttac  10005000                                                                     <---------ZAT2                                                              <----------DOF2                                                              <---------DAG2                   <---------HSFB2a(1)                       <---------ANAC58 <-----------HVH21                   --------->HSFB2a(1)                       <---------ANAC58<---------ETT(2)           <-----------RAV1(1)                          <---------ICU4       --------->ETT(2)     <--         <----------DOF2              ----------->GT1  --------->ICU4--------->ZAT2              ----       <---------HSFB2a(1)----------->GT1              <---------YAB1<---------At4g35610       <-----     <---------GLK1(2)  <---------ANAC46       --------->ALFIN1      --------->At4g35610       ------   attgttggaatctttgttggaatgtttctggtgaattgaattgttaaatgtggagtcattcttgctttttcagcttcggtcgtcatcgagtgccagtgat  10005100                                         --------->ALFIN1                                <---------At4g35610                                        --------->REM1(2)                              <---------HSFB2a(2)                                       --------->ALFIN1                                --------->HSFB2a(2)         --------->YAB1              <---------ANAC58                              <---------ANAC58        --------->ICU4               <---------ANAC55(1)                           <---------ANAC58        <---------ATHB12             <---------bZIP60(2)                          --------->ZAT2   --------->ANAC58      <---------RVE1(1)                                       ------>ZmHOX2a(1)   --------->ANAC58      <---------CCA1(1)                                     <---------ANAC58   --------->ANAC46     <---------ARR14(2)                                  <----------DOF2 --------DOF2           --------->ARR14(2)                                 --------->HSFB2a(1) -->ZmHOX2a(2)      <---------LBD16  <---------ANAC46            <---------ZAT6<---------ANAC58   <-- ----ARR11(3)<---------ARR11(3)      <---------ANAC58   ---------->DOF2    <---------HSFB2a(1)    --- --->ARR11(3)--------->ARR11(3)<---------YAB1     <------ZmHOX2a(1)      <------ZmHOX2a(1)       <---   ctttcaagcaatgaagacattcttcggatatttctgatggcgtgtggagtcaggaatacaaagcttagtgttataggactttcctgcttgcagaagctta  10005200  Previous    Next  AGI:  At5g27970.1    Description:  binding. similar to ATMIN7 (ARABIDOPSIS THALIANA HOPM INTERACTOR 7), guanyl-nucleotide exchange factor/ protein binding [Arabidopsis thaliana] (TAIR:AT3G43300.1); similar to predicted protein [Physcomitrella patens subsp. patens] (GB:EDQ62905.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO42998.1); similar to hypothetical protein OsI_003838 [Oryza sativa (indica cultivar-group)] (GB:EAY75991.1); contains InterPro domain Armadillo-type fold; (InterPro:IPR016024); contains InterPro domain HEAT (InterPro:IPR000357) Range:  from: 10004724    to: 10015672    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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