Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                -------                                                                                              -------                                                                                              -------                                                                                              -------                                                                                              <------                                                                                        <---------AHL20(2)                                                                                    --------->AHL20(2)                                                                                    <---------AHL20(2)                                                  --------------->AtSPL3           --------->AHL20(2)         <---------ARR14(2)                       <---------ICU4                --------->AHL20(2)         --------->ARR14(2)                    --------->YAB1                  <---------ARR11(3)      XXXXXXXXXXXXXXXXXXXX>MIR160A-C         --------->ANAC58                  <---------AHL20(1)    --------->ANAC58                         --------->ANAC58--------->YAB1    --------->AHL20(1)    --------->ANAC58     --------->YAB1  <-----------GT1<---------DAG2         --------->ARR11(3)----   ------>NtERF2      ---------->DOF2<----------DOF2    <----------DOF2 ----------->GT1 --------->AHL20(2)   cttggcacccaaatccctgtttaccaaagataaatgagactttttacaagcataagtactttttcataagagtcttgtgaaaatatttaatttaagacgc  9959900    --------->ANAC58                                                                   <---------ZAT18    --------->ANAC58                                                                   --------->ZAT14    --------->GLK1(2)                               --------->WOX13(1)      ------>MYB83           <- -->ANAC46                                        <---------AHL20(2)        ------>MYB46(1)     ----- -->ANAC58             --------->DAG2   --------->DAG2                  ------->TEIL   --------->ZAT18 -->ANAC55(1)         ---------->DOF2  ---------->DOF2<---------ATHB12 <-----------GT1 <---------ZAT14 -->ANAC58--------->YAB1    --------->At5g28300   --------->AHL20(2)<---------------AtSPL3      <---- ---ANAC55(2)--------->YAB1----------->GT1 <------ZmHOX2a(1)        <---------------AtSPL8      ----- ----->MYB52(1)    --------->YAB1      --------->MYB52(1)           --------------->AtSPL8    -------   aacgagaagctataaacatactcataaagcggtaaataacataaaggactatataaatcaagatgatgttattgtacctcccaaacgagtgcacaatcct  9960000                                                    --------------->AtSPL8                                                  ------>ZmHOX2a(2)                                                 ================================HOX2a_HOX2a                                                --------->ARR11(3)                                                --------->AGP1                                                --------->ARR14(2)                                                <---------ARR14(2)                                                <---------ARR11(3)                --------->LBD16           --------->ATHB12       <----------DOF2                    <---------ICU4       <---------DAG2                     -------->ATHB1      <---------DAG2       ---------->DOF2--------->ATHB51 <-----------GT1<------NtERF2            <---------AHL20(2)    --------->YAB1 --------WOX13(1)     ----------->GT1    --------->ICU4       <---------TOE2(3)    --------->GLK1(2) ---->ICU4      ------>NtERF2            <---------ATHB51 --------->TOE2(3) --------->GLK1(1) -----YAB1     --------->DEAR3(1)        --------->AHL20(2)   <---------YAB1<---------GLK1(1) ->ZmHOX2a(1) <---------LBD16      ----------->GT1===============================HOX2a_HOX2a -->YAB1     <---------RAP2.3(1)  ----------->GT1<------ZmHOX2a(2)        <------ZmHOX2a(1)<---------   gattaacgcctttttcgccgcgtttggagaaaagagaggctaaattattagatccttgtacattaacataaccagaggatttcagaatcaattctttttt  9960100                                    <-----------HVH21                                   <---------ANAC58                                   <---------ANAC58                               <----------DOF2                         --------->ZAT2                         --------->At4g35610                         <---------HSFB2a(1)                         <---------At4g35610                         --------->HSFB2a(1)                      --------->At4g35610                      <---------At4g35610                              --------->HSFB2a(2)                   --------->At4g35610   <---------TOE1(2)             <---------HSFB2a(2)       <---------ANAC58  --------->HSFC1(2)                        <----------DOF2   <---------At4g35610 -DOF2 <---------ANAC58  <---------HSFC1(2)                    <----------DOF2    ------>ZmHOX2a(2)   cttagcctcgcttgccatctcatcagcagcttcctttgcgtcgcagtttccattgttgttcttcactttctttatagaaaatgatcgagctaatccattg  9960200                                                                                            ------>ZmHOX2a(1)                                                        --------->MYB46(3)                 --------->TOE1(3)                                                      ----------->RAV1(1)                 ------>ZmHOX2a(2)                                                   --------->ANAC58                      <---------YAB1                                                   --------->ANAC46                     --------->ARR11(3)                                                   --------->ANAC58                     <---------ARR11(3)                                             <---------AHL20(2)                     --------->At4g35610                                             <---------AHL20(1)                     <---------At4g35610                                             --------->AHL20(1)                   <-----------RAV1(2)                        --------->AHL20(2)  <---------------AGL15               <-----------HVH21                     <----------DOF2      --------->AHL20(2)              ------>ZmHOX2a(1)--------->TOE2(3)             <-----------HVH21     ---------->DOF2--------->WOX13(1)      =======================HOX2a_HOX2a   aacatcgatgagaaatgtcccatcttttaaataccccaaaagattaatatatcaagcaacaacgagaaactttctccttaagcttcagatgatccttaaa  9960300                                                           ----------->GT1                                              <---------ARR11(3)                 <----------DOF2              --------->ARR11(3)       ---------->DOF2        --------->AtMYB61                    <---------GLK1(1)     --------->TOE1(3)  --------->ANAC46                <---------ZAT6--------->YAB1     --------->TOE2(3)  --------->ANAC58           --------->YAB1  --------->GLK1(1)   <---------ARR11(3)          <-------  --------->ANAC58          <---------YAB1 *TSS<------ZmHOX2a(2) --------->ARR11(3)     --------->YAB1   aaacaagaaaccaaaacttctttagaaactttgatagtgctacaaggagatcataaaacagaggttaaatcttaaaagtaagaagatgagtcatagtgtt  9960400                                                                                                   <-                                                             ----------->HVH21                <------                                                     --------->YAB1                  --------->HSFC1(2) <---------ARR14(2)                                 <-------TEIL<---------bZIP60(2)  <---------HSFC1(2) --------->GLK1(2)                               <---------KAN4(1)                  --------->ANAC58 <-----------ARR10             <------------CBF  --------->KAN4(1)                  --------->ANAC58 --------->ARR14(2)     ----------->RAV1(1)     <---------KAN4(2)     --------->GLK1(1)       ------- --ZAT6    <----------DOF2    --------->DAG2    ---------->TaMYB80    <---------GLK1(1)     <--------   gagaatctagacactttgaaaaacaacaacaaaaattgaacttcaagtggaatattcataagtctgacatggaattccattgaaacaagcttctaagatt  9960500                                                                               <---------TOE2(3)                                                                         <---------------AGL15                                                                         --------------->AGL15                                                                        <-----------------AGL3                                                                        <-----------------AGL2                                                                        <-----------------AG                                                                        ----------------->AG                                                                        <-----------------AGL1                                                                        --------->TOE2(3)                                                                        ----------------->AGL3         ------->TEIL                                                   =============================     <---------------AtSPL8               ===========================================================     --------------->AtSPL8               <---------------AGL15    <---------CCA1(1) <----------DOF2                          --------------->AGL15    <---------RVE1(1) --------YAB1                            ----------------->AGL3   --------->ARR11(3) ---ARR11(3)                             ================================================MADS_MADS -->ARR11(3)                           --------->GLK1(2)     --------->HSFB2a(2) <------ZmHOX2a(1) -TOE2(3)<-------TEIL         ---------->DOF2  ---------->DOF2    <---------ARR11(3) ----------->GT1   tatctttgatgtacatgattttgacttgaagggaaagagagtttctgtttaaagaaaacacatctagagatatttcttaataaggaaatgtaaaacaagt  9960600                          --------------->AGL15                          <---------DAG2                                                           --                          <---------------AGL15                                                 <----                    <----------DOF2     <---------MYB52(2)                                      <----            --------->GLK1(2)    --------->LBD16                   <----------DOF2              -----           <---------GLK1(2)    <---------LBD16                   <---------HSFC1(2)            -----           <---------ARR11(3)  <---------LBD16--------->ANAC58    <---------HSFB2a(1)     --------->ZAT6    --------->GLK1(2)     <----------DOF2     --------->ANAC58    --------->HSFB2a(1)     <----------  <---------HSFB2a(1)    <---------ANAC58     --------->ANAC46    --------->HSFC1(2) <---------ANAC58  --------->HSFB2a(1)    <---------ANAC58 --------->MYB52(1)    --------->ARR11(3)   <---------ANAC58 =========================================MADS_MADS             <---------ARR11(3)   <---------ANAC46 =========================================MADS_MADS     --------->AHL20(2)      <-----------RAV1(1)<-   tgcaagattccaagattcttctcttttgctttttcagggaaaactaacaagaaacaaaaaaaatgagaactttctcagcatgttgttgcttaatactata  9960700 <---------AHL20(2) ------->AHL20(2) -----ARR11(3) -----AHL20(1)              --------->ANAC58                    --------->YAB1 ---->AHL20(1)              --------->ANAC58        --------->ARR14(2) ---->AHL20(2)         ---------->DOF2              <---------GLK1(2) -GT1          ---------->DOF2                    ----------->ARR10                 <---------ICU4 --------AHL20(2) ----------->GT1     --------->YAB1--------->ARR11(1)        ----------->GT1     <--   tattaatatgaacacctaaaaggctaaaagaagcaaacactcttaatctccatagatttgcttcaaaaataagtttgataagataaaaatttctaaattt  9960800  Previous    Next  AGI:  At5g27930.1    Description:  protein phosphatase 2C, putative / PP2C, putative. similar to protein phosphatase 2C, putative / PP2C, putative [Arabidopsis thaliana] (TAIR:AT3G05640.1); similar to protein phosphatase 2C, putative / PP2C, putative [Arabidopsis thaliana] (TAIR:AT3G05640.2); similar to unknown [Populus trichocarpa] (GB:ABK92926.1); contains InterPro domain Protein phosphatase 2C-related; (InterPro:IPR001932); contains InterPro domain Protein phosphatase 2C; (InterPro:IPR015655); contains InterPro domain Protein phosphatase 2C, N-terminal (InterPro:IPR014045) Range:  from: 9958102    to: 9960343    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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