Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                  ------>ZmHOX2a(2)                                                               <------ZmHOX2a(2)                                                              <---------ARR14(2)                                                              --------->ARR14(2)                                                        --------->ARR14(2)                                                        --------->ARR11(1)                                    <------NtERF2       <---------ARR14(2)                                    ----------->GT1    <------ZmHOX2a(1)       <---------ATHB12                                  <---------ANAC46     <---------HSFB2a(1)   --------->WOX13(1)                                <-----------HVH21      ===============HOX2a_HOX2a             <------ZmHOX2a(1)                              --------->HSFC1(2)       ================HOX2a_HOX2a  <---------ZAT18 ---->ALFIN1                  <---------HSFC1(2)   --------->LBD16  <---------SPL7  --------->ZAT18 < --AtMYB61 --------->ALFIN1   <---------HSFB2a(1)<---------LBD16=====================================HOX2a_HOX2a   cgagggaagagaggtttgggtatttgaagagaagcgtcgggagaaattcgacccggaggattcggatcgtggtacgagtcaatgagtcgactcggaggaa  9944400                                                                                                   <-                                                                                                   --                                       <---------HSFB2a(2)                                         <-                                       --------->HSFB2a(2)                    --------->MYB52(1)   <-                                   <------MYB83                         <---------ETT(1)           <-                                   <------MYB46(1)                  ------>ZmHOX2a(2)              <-                                  --------->MYB55(2)               <------ZmHOX2a(2)               --                            <---------ALFIN1                      <-----------ARR10                --             --------->ANAC58     --------->ABI4(2)               <---------ARR14(3)               ==             --------->ANAC58     <---------MYB46(3)              <---------ARR11(3)              ---             --------->ANAC46    --------->ALFIN1                 --------->ARR11(3)             <---           <-----------GT1 <---------REM1(2)                      <---------ARR14(2)            -----     <---------YAB1      <---------ETT(1)                         --------->ARR14(2)  <---------AHL20(2)   <---------At4g35610   --------->ANAC46                         --------->ARR14(3) --------->AHL20(2) ----------DOF2          ----------->HVH21    <-------TEIL      ----------->ARR10----------->GT1-----   gtctttgctgattaaacgccatgttttccgacacggtgggtctagacattcgtagactcggacaagaagatcttccgacaaaacggataaaattgatggt  9944500   <---------DDF1  --------->ETT(2)  <---------ETT(2) --------bZIP60(1) ------->TGA1a --------O2 --------TGA1a --------bZIP60(2) --------ANAC46 ------->bZIP60(1) ------->O2 ========================MYC_MYB                ---------->DOF2    ---------->DOF2 -------->STF1                             ----------->RAV1(1)  <------ZmHOX2a(1) ------TGA2(2)                    --------->ANAC46            <---------TOE2(3)                     - ------>HVH21    ------->GAMYB    --------->ANAC58            <---------TOE1(3)            --------->ARR14(2) ------>TGA1  ----------->RAV1(1) --------->ANAC58      <---------------AGL15              <---------ARR14(2)   gacgtcgacatttttgcaacagaaccagaaataaacacacaacaacaacaaaaagaaactttttaaggagaaagaaatgtgttttctctaatggattcga  9944600                                                                                            <--------                                                                                            ---------                                                                                            ---------                                                                                            ------>ZmHOX2a(2)                                                                                           --------->ARR14(1)                                                                                           <------ZmHOX2a(2)                                                                                           --------->CCA1(2)                                                                                          <---------ARR11(3)                                                                                          --------->AGP1                                                                                          --------->ARR14(2)                                                --------->ZAT2                            <---------ARR14(2)                                                --------->At4g35610             --------->ARR14(2)                                                <---------At4g35610            <---------MYB52(1) ----------->GT1                                <---------ZAT2             ------->TEIL   --------->ARR11(3) ---------->GT1 <----------DOF2    ---------->DOF2                   --------->ALFIN1   ----------->ARR10   aatcggaaaaatttgaagctttttttttaagtcggaataaagagaaacacagctcggagatagagtagagagtggtgaaccggtttttctaagatccgaa  9944700                   <---------ANAC58                   <---------ANAC58    <---------DOF5.7(2)       --------->ANAC46           ----------->GT1    --------->MYB52(1)        --------->ANAC58          <---------MYB46(3)        *TSS   <---------WRKY38(1)        --------->ANAC58         --------->ALFIN1   ------->TEIL   <---------WRKY12<---------ANAC46                   <---------MYB52(1) ------>MYB83  --------->DOF5.7(2)   <-------TEIL                 --------->LBD16     --------->ARR14(2) ---------AG      <---------LBD16                  <---------LBD16       ------>MYB46(1)       <----- -------->AG    <---------ARR14(2)              <----------DOF2     --------->MYB52(1)     <---------AHL20(2) -------->AGL1  --------->ARR14(2)         <------NtERF2----------->GT1<---------MYB59    <---------YAB1   ttgggttaacggtttgcagtttcgggttcatcacgccgattagtcggagactttccggtgggaaaaaacaaaaccgaacctctctctaaatttttatttt  9944800                                                                    --------->ANAC58                                                                    --------->ANAC58                                                      ----------->HVH21                                                     <-----------HVH21   ----------->TGA1        ---------->DOF2      <------ZmHOX2a(1)      <---------ANAC58--------->ANAC55(1)       <---------AHL20(2)  <---------TOE2(3) ---------->DOF2      --------->ZAT6                 <---     <-----------TBP --------->AHL20(2)   >>>>>>>>>TBF1     <------ZmHOX2a(1)                    <--- ----AHL20(2)   ----------->GT1        >>>>>>>>>TBF1<---------ANAC58--------->ANAC46        ---------   ttctgatatataaaggagaagaaaaaaatgaggaagacgaagaagaagaaagaagcgtgacaggaataacacgaaatgacgaaaacacccctaatcttac  9944900                                                             <-------MYC4                                                             ------->MYC2                                                             <-------PIF5                                                             ------->MYC3                                                             ------->PIF5                                                             ------->MYC4                                                             <-------MYC2                                               <---------MYB46(3)    <---------AHL20(1)                                               ----------->GT1       --------->AHL20(1)                                             ------->MYC3    <-------MYC3                                             <-------MYC3   <---------O2                                          <---------ANAC46  --------->O2   ----------->GT1                    ================================bZIP_DOF  --------->ANAC58                    <----------DOF2       <---------PIF3(3)  --------->ANAC58                   ------>ZmHOX2a(2)      --------->PIF3(3)    --------->MYB52(2)  <---------ANAC55(2)               <---------RVE1(1)       --------->TGA1a    <---------MYB52(1) <---------LBD16  <------MYB83      <------ZmHOX2a(2)       ============================MYC_MYB ------------AtSPL8                --------->ARR11(3)       ========================================= ------------AtSPL3                <---------ARR11(3)       <---------TGA1a    <--------P    <------- >YAB1            <------MYB46(1)  --------->AGP1      <-----------GT1       <---------MYB46(3)   <--   tagtacggaaacaatgtgtttggtttttggagtttgagatctttacgcgtggttaattatccacgtggatatatattagtggttagttatggaggcttta  9945000                                                                                  <---------ANAC58                                                                                  <---------ANAC58                                                                             --------->bZIP60(2)                                                                             --------->ANAC58                                                                             --------->ANAC58                                                                             --------->ANAC46                                                                             <---------ANAC55(2)                                                                             <---------O2                                                                             --------->O2                                                                             --------->TGA1a                                                                             <---------TGA1a                                                                             --------->ANAC55(2)                                                                        <---------TCP20                                                                        <---------TCP15(1)                                                                        --------->PCF2                                                                       --------->TCP15(1)                                                                       <---------PCF2                                     --------->MYB52(1)               ----------->HVH21                                   <---------MYB59                   --------->LBD16                                  --------->ANAC55(2)               <---------ANAC46                       ----------->GT1   --------->ZAT14      <---------ALFIN1  --------->MYB52(1)  -                       --------->At4g35610                  ----------->RAV1(1)----------->HVH21    <                       <---------At4g35610                 --------->ANAC46<---------ALFIN1         -                    <---------At4g35610--------->ZAT6     <---------ZAT14--------->DEAR3(2)   <------      --------->At4g35610   <---------YAB1           <------MYB83   <---------ANAC58     --------->DEAR3(1)      <---------At4g35610   --------->ICU4          --------->MYB59<---------LBD16<---------ANAC46  -    <------ZmHOX2a(1)<-----------RAV1(2) <---------ZAT14  --------->At4g35610--------->ANAC55(1)----- ===bZIP_DOF <---------ARR14(2)   <---------ANAC55(2)<------MYB46(1)<---------ANAC58     --------->MYB46(3) ---DOF2     --------->ARR14(2) <-----------GT1     --------->MYB46(2)<---------SPL7 <-------TEIL <-- -------ZAT6<------ZmHOX2a(1)<---------ICU4------->TEIL   --------->ZAT18--------->TCP15(2) ---------   ttgttaggagcagaggatttggagcaggtgattattacataactgtaccgaagttaggtctgcaccacttgcgggacccacgtaacgtgcatcgaccgta  9945100                                                                             <---------AHL20(1)                                                                             --------->AHL20(2)       ----------->HVH21                                                     --------->AHL20(1) -------->ARR14(2)                                                           <---------AHL20(2) ---------ARR14(2)                   --------->AHL20(1)                      <---------ARR11(3) ----->MYB83                         <---------AHL20(1)                      --------->ARR11(3) ---SPL7                             --------->ICU4                         --------->AHL20(2) ----->MYB46(1)        --------->YAB1<---------ARR11(3)                 --------->AHL20(2)        <-- -->TEIL<---------WRKY18(1)     ----------->GT1                   --------->AHL20(2)         <------- -------MYB59          ----------->GT1                ---------->DOF2   <---------AHL20(2)   -------- ------>AtSPL3        <---------YAB1 --------->ARR11(3)           <---------AHL20(2)      --------->YAB1   cctatctgtttgacccaaaactatatgataaaaatcgaaaatattagtttgtccaaaaaagcatatattaaaaaataaatatattgaagaaatcatattc  9945200                  <---------ANAC55(2)                  --------->ANAC55(2)                  --------->ANAC58                  --------->ANAC58                  --------->ANAC46       <---------TGA1a       <---------ANAC46       <---------ANAC58       <---------ANAC58       --------->O2       <---------O2 --------->ANAC46       <---------bZIP60(2)       --------->TGA1a       <---------O2    ----------->HVH21      <-----------HVH21         <---------AHL20(2)                      <-------    ----------->TGA1----------->HVH21 <------ZmHOX2a(2)                      <---------MYB52(1) -------MYB52(1) --------->ZAT18     <---------ARR11(3)           <---------ANAC46           -------- --ARR14(2)      <---------ZAT18    <---------At4g35610           <---------ANAC58     --------->DAG2 ->ARR14(2)  <---------------AtSPL8 --------->At4g35610           <---------ANAC58    ---------->DOF2   gtttgtctgacgtggatagtacgcgacatcgtcgtggcagatcacaaattgctattttaaaaacgatgtcgtgtaaacagttatctaaaaaagttttgtg  9945300  Previous    Next  AGI:  At5g27920.1    Description:  F-box family protein. similar to F-box family protein (FBL3) [Arabidopsis thaliana] (TAIR:AT5G01720.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO17504.1); contains InterPro domain Leucine-rich repeat 2 (InterPro:IPR013101); contains InterPro domain Leucine-rich repeat, cysteine-containing subtype (InterPro:IPR006553) Range:  from: 9941909    to: 9944782    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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