Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                          <---------YAB1                                   <----------DOF2                                 <---------At4g35610                            <<<<<<<<<WRKY18                                --------->ANAC46                               --------->WRKY18(1)                               <---------LBD16                              --------->DAG2                         --------->ARR11(3)                                ---------->DOF2        <--                         <---------ARR11(3)    --------->At4g35610     <---------YAB1          ------                         --------->ARR14(2)    <---------At4g35610  <---------YAB1            <------ ->GT1             <---------YAB1--------->LBD16      ---------->DOF2--------->YAB1    <-------GAMYB   attcttggagaaagactcttgatgaaagatattcccgctgttactattcagatgaagaaagaacagaggtatcatggtaaagtcaaggctgttatcgatt  9860900                                                                             --------->LBD16                                                                             ----------->GT1        <---------ZAT2                                                <----------DOF2        --------->ZAT2                    --------->GLK1(2)       <---------MYB52(1)       --------->GLK1(2)                 --------->YAB1         <---------ANAC58                    < -------HSFB2a(2)                       <---------ATHB12        <---------ANAC58     <----------ID1 < --->GLK1(2)                     --------->KAN4(1)   <---------MYB52(1)    <---------LBD16        --- ---GLK1(2)                     <---------YAB1  <-----------------AGL1<---------------AGL15    <-----   ctgtaagagaagctggtgtcaagttgctctgaagattattcaataatctgaatcagtttggcaatgtcgtttctttttccggttaatcggacaaattgag  9861000          ----------->RAV1(1)         <------NtERF2        ------>NtERF2     <------MYB46(1)     <------MYB83                                        ------->TEIL ---------YAB1                                        <---------YAB1            ----------->GT1 ---------TOE2(3)                                 <---------ARR11(3)  --------->WRKY38(1)        ---- ------>CCA1(2)              <----------DOF2      --------->ARR11(3)  --------->WRKY45         ------ ----TOE2(3)       ---------->DOF2          <-----------GT1         <----------DOF2           <------   ataagattggtgccacatttttaaagccctgcttttaaaatccatgttacaagataatgaatgttataagctttgactatggaagtaaaatagattacat  9861100                                                                                              <------                                                                                             --------                                                                                            ---------                                                                                           <---------WOX13(1)                                                                                         <---------ICU4              <-----------GT1                                                            --------->ATHB51         <----------DOF2                                                                 --------->ATHB12  <---------AHL20(2)                                                --------->GLK1(2)   --------->ICU4 --------->AHL20(1)                                                <---------GLK1(2)    <---------YAB1 --------->AHL20(2)                                         --------->DAG2            --------->YAB1 <---------AHL20(2)                                        ---------->DOF2      <---------HSFB2a(2) ----->AHL20(2)                                       <---------ATHB12          --------->HSFB2a(2) --->TOE2(3)--------->YAB1                          --------->WOX13(1) <----------DOF2--------->TOE2(3) ---ANAC55(2) --------->ZAT6                 --------->ANAC46    ----------->ARR10    --------->TOE1(3)   aaatttaatgtctttaatactattctgcgattaatggtgttttcttcacgagattaatcaataaagtgagattctttttgttctaaaaccataattgacg  9861200                                 --------->ZAT6                             --------->LBD16                            --------->ANAC55(1)                            ----------->GT1                            --------->ANAC55(2)                            --------->ANAC58                            <---------ANAC55(2)                       --------->WRKY38(1)                       <---------WRKY38(1)        <------------CBF    --------->ANAC58     ------------>CBF  --------->ETT(2) ---LBD16              <---------ETT(2)             <--------P             <---------MYB52(1) ->MYB52(1)            ----------->HVH21        <---------ANAC46          <----------DOF2     <------ -->HVH21  --------->MYB59  --------->ANAC46 ------>ZmHOX2a(1)         ------->TEIL          *TSS   <   gagtctatgcaattgggtaatcgggtcgacccgtaatactattcttcctctcgggtaagacttgtaaatgttgaacctttagtcacgagtactcgtcttt  9861300                                        ---------->DOF2                                    ------>ZmHOX2a(2)                            <------ZmHOX2a(2)                                              ==========                           <---------ARR11(3)                                             <------ZmHOX2a(2)                           --------->ARR11(3)                                             ===========     ---------->ID1      ----------->ARR10                 <---------TOE2(3)             --------->ARR14(2) ----DOF2      <---------ANAC58  <---------ZAT14    --------->ARR11(3)                   <---------ARR14(2) ----------DOF2<---------ANAC58  --------->ZAT14    <---------ARR11(3)     <---------YAB1--------->ARR11(3)   gtcttttgtcattttttgcttcgagctaagatcagtgaagagaaaagatgggaagatgtttaacgaagaaggtgtttttgattcagagtccgatcttgtt  9861400                       --------->SPL7                     <---------SPL7                                                   ---------------               <----------DOF2                                                     <---------GLK1(1)            ------>ZmHOX2a(2)        <---------ARR11(3)                      <-------GAMYB           --------->GLK1(1)       <---------AHL20(2)                       <------MYB83          <---------ARR11(3)      --------->AHL20(2)                        --------->MYB55(2)        ------>ZmHOX2a(1)      <---------ZAT6                               <---------MYB46(3)      ----------->RAV1(2)  <---------MYB52(1)                               <------MYB46(1)   <---------At4g35610 <---------LBD16                                  <-----------RAV1(1) ==============HOX2a_HOX2a <--------P--------->ARR11(3)<-----------RAV1(1)<---------MYB52(1) ==============HOX2a_HOX2a<---------MYB52(1)        <----------DOF2    ------>ZmHOX2a(2)          ---   tcttcatctcctgatctctttatcgtccggttagtattaaatcttagggttcttcttttgttgtcacatttgatctgttggttagatttcagaaatgggt  9861500              <---------AHL20(2)             --------->AHL20(2)    <---------ARR11(3)    <---------ARR14(3)    --------->ARR11(3)    --------->ARR14(2)    <---------ARR14(2)                                                          --------->ANAC58    --------->ARR14(3)                                                          --------->ANAC58  ----------->ARR10                                          <---------ICU4   ---------->DOF2 -->AGL1 <---------AHL20(2)              <------------------------ANAC81<---------MYB46(3)    <------ZmHOX2a(1) ------>DEAR3(2) <---------YAB1    <----------DOF2       <------ZmHOX2a(2) --------->AtLEC2 <--------   accgaagatattgaattttataatcgaaagtttcaatcttttttgtttttgtcatttggatcatcttgactcgtttgatgcaaagcaacttgtttaggaa  9861600                                                                                       <------MYB83                                                                                  <---------ZAT6                        --------->TOE2(3)                                         --------->ALFIN1                        --------->YAB1                                          <---------ANAC46 <---                   --------->ZAT2                                             <---------ZAT14   -----                   <---------At4g35610                        <---------ANAC46--------->ZAT14   <----                   --------->At4g35610        --------->CCA1(2) <---------ZAT6--------->ZAT18  <-----       <-----------RAV1(1)            ----------->GT1 <----------DOF2    <---------YAB1<------MYB46(1) -TOE2(3)       ------>ZmHOX2a(1)     <---------MYB46(3)    <---------ZAT14<---------ANAC46 <--------   ttggattttgtgttgttcctcagctatcttagttttgggattgttaagagatgggactttggtgaagtgttcattttgagtgaagtgttcggttttggtg  9861700                                                     <---------ARR14(2)                                                   --------->LBD16                                                 <---------LBD16                                               <---------ARR14(2)                            ------>NtERF2                                          ----------->GT1                                    --------       <---------ANAC58                   <---------ANAC46                                  ---------       <---------ANAC58                 --------->ZAT18                                  --------->ARR14(2) <---------YAB1                         --------->ZAT14                                 <---------GLK1(1) <---------ANAC46                      --------->ALFIN1                                 --------->GLK1(1) ----GAMYB                           <---------At4g35610                               --------->HSFC1(2) ---->MYB55(2)       --------->HSFB2a(2)<-------TEIL --------->ARR14(2)                <---------HSFC1(2) -----MYB46(3)       <---------HSFB2a(2)<---------ZAT14                               <------MYB83 ----AtMYB61       <---------REM1(1) --------->At4g35610                              <------MYB46(1) -AtMYB61       <---------MYB46(3) <-----------RAV1(2)    ---------->DOF2   ---------->DOF2<---------LBD16   gttgtgtttgcttaagaatggttgtagaacaatgttttcaggtgcagtgaaaccggatttgaaaggagtatgtgtttctaaaggagggaggtttccgcca  9861800  Previous    Next  AGI:  At5g27820.1    Description:  ribosomal protein L18 family protein. similar to 50S ribosomal protein L18 family [Arabidopsis thaliana] (TAIR:AT3G20230.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN74240.1); contains InterPro domain Ribosomal protein L18/L5; (InterPro:IPR005484) Range:  from: 9859858    to: 9861133    Orientation: Forward Links:  TAIR  MIPS    AGI:  At5g27830.1    Description:  similar to hypothetical protein [Vitis vinifera] (GB:CAN74239.1); contains InterPro domain Folate receptor (InterPro:IPR004269) Range:  from: 9861293    to: 9862900    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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