Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                   <------MYB83                                 <------MYB46(1)                                --------->MYB59         <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)       <---------AHL20(2)     <---------MYB52(1)      <---------YAB1    <---------GLK1(1)     <---------AHL20(2) --------->GLK1(1)                            <---------ANAC46   <---------AHL20(2)  --------->ARR14(2)                            <---------ANAC58 <---------AHL20(2)    ---------->TaMYB80                 <---------MYB52(1) -------->AHL20(1)     <---------ARR14(2)           --------->ARR14(2)      <------ZmHOX2a(1)    <--- ---------AHL20(1)  <---------ANAC46             ------>ZmHOX2a(2)   <---------ANAC58            <--- ----->CCA1(2)     <---------LBD16 <----------DOF2  <---------ARR14(2)     <xxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3) ---->ARR11(3)    --------->MYB52(1)             ==================================HOX2a_HOX2a   ----   tatatatttttattttggattagcggatatcagttcggtttttggtatggatcgaattcggtttgggtaattcgtgtaggagaattcattatctgttcgg  9835500                                                                                 <---------YAB1                                                                               <--------HAHB4                                                                               --------->ATHB51                                                                               <---------ICU4             <---------SPL7                                                   --------->ICU4           --------->MYB59                                                    <---------YAB1           --------------->AtSPL3                                           --------->YAB1        --------->KAN4(2)                                                  <---------ATHB12      <---------YAB1                                                       --------->MYB46(3)   -----      --------->ICU4                                                      ------>MYB46(1) <----------   <---------YAB1                               <---------YAB1            ------>MYB83    --------->MYB52(1) ------ARR14(2)                          <---------ANAC46                 -------->P<---------ANAC55(2) ------GLK1(2)                        <---------ARR14(2)         <---------AHL20(2) --------->ANAC55(2) ----->ARR14(2)--------->SPL7         --------->ARR14(2)        --------->AHL20(2)<-----------GT1 ---   attttgtgattattcggtacgatttggattttttgaatcggtttcggatgatttttggattttgaattttatgtccaaccattattacttaataactgaa  9835600                                                              <-------GAMYB                                                              <---------At4g35610                                                           <-------TEIL                                                        <------MYB83                                                        <------MYB46(1)                                                       <---------TOE2(3)                                                       --------->MYB59                                                  <---------YAB1                                               --------->GLK1(2)  <------ZmHOX2a(1)                           <---------ARR11(3)             <---------ANAC58      -- -->TEIL                    ---------->DOF2   <---------GLK1(2)<---------MYB52(1)               <---- -GT1              ----------->GT1            <---------ARR14(2)             <---------ANAC58-------- ------>TOE1(2)   ----------->GT1             --------->ARR14(2)      --------->YAB1       <---------   tctaggaattgttttgaagagtggaaaaaaaaaaggaattgttttgaagattctaattaggttcagttgttttcatattgtttgcaaaaacaaatgtggg  9835700        --------->ANAC58                          <-----------GT1        --------->ANAC58                    --------->ICU4        --------->ANAC46               ----------->GT1       <---------LBD16               ------>ZmHOX2a(1)     --------->ANAC46              ------>ZmHOX2a(2)   <---------ALFIN1              <---------ARR11(3)  ------->GAMYB                  --------->ARR14(2)                                    --------->GLK1(2) <---------ALFIN1                <---------ARR14(2)                                    --------->ARR14(2) --------->RAV1(1)               --------->ARR11(3)                                    <---------ARR14(2) -----PCF2             ----------------->AGL3<---------ICU4                  ----------->GT1 ->ALFIN1--------->LBD16 <xxxxxxxxxxxxxxxsmallRNA(fl3)                     <---------ANAC58         < --RAV1(1)           ------>NtERF2<------ZmHOX2a(2)    -------->P          <---------ANAC58 ---------   gcaacacactccgcaagtttctcggcccattagtagatcctttgtaaaaatttcacttacccattacaaatatttgggcttgaaaaacaaatctgaaagt  9835800                                                          --------->AHL20(2)                                                       --------->YAB1           --------->ANAC58                          <---------AHL20(2)          <---------YAB1            --------->ANAC58                         --------->AHL20(2)        <---------YAB1               <----------ID1    <--                         <---------AHL20(2)      --------->YAB1               ---------->DOF2  ------                     --------->AHL20(2)     <---------MYB52(1)            --------->TOE1(3)    ------ ---------LBD16    ----------->GT1 <------ZmHOX2a(2)--------->YAB1        --------->TOE2(3)  <------- ->DOF2          ---------->DOF2 <------ZmHOX2a(1)<-----------GT1      <---------ALFIN1  *TSS--------   tatcggggctaatttcgaataaagaaaataaatgaggatcacttctgttatttatcatcataaaatgacacgagcaccttaaaagccaaaaaaaacctaa  9835900                                               --------->ANAC46                                        <---------ALFIN1                                     <---------ALFIN1                                    <---------At4g35610                           <---------YAB1 <---------ARR11(3)                 ------>NtERF2                            <---------bZIP60(1) --------->ARR11(3)             --------->ANAC46                             --------->bZIP60(1) ---------GT1           <------ZmHOX2a(2)   <---------REM1(2)             ----------->HVH21 >MYB46(1)              ========================HOX2a_HOX2a             <---------At4g35610 >MYB83                --------->ARR11(3)   --------->ZAT14             --------->At4g35610         < --MYB59<<<<<<<<<TBF1  <---------ARR11(3)------>ZmHOX2a(1)            <-----------RAV1(2)           - ->TOE2(3)         ---------->DOF2 --------->DEAR3(1)               <-----------HVH21      ------>ZmHOX2a(1)   taacatcttcttcttcgtcttcaaagatcaaaaaacgccgctcctcttcacacagttccatcttcttcaacttcaggtgacaccattatcgtccttcgtt  9836000                           <---------MYB46(3)                 --------->ARR14(2)                                 --------->HSFB2a(2)        <-----                 <---------ARR14(2)                   <---------TOE2(3)             ------->GAMYB  <-            --------->GLK1(2)                      <---------MYB52(1)            --------->MYB52(1)--           <---------GLK1(2)                      --------->TOE1(3) ------>ZmHOX2a(1) ------->TEIL <-      --------->YAB1    <-----------RAV1(1)       --------->TOE2(3) --------->LBD16<---------MYB52(2) ---------ARR11(3)   ------>ZmHOX2a(1)  <---------At4g35610         <---------HSFB2a(2) --------->TOE2(3) -------->ARR11(3)  <---------YAB1      --------->At4g35610        <---------LBD16 --------->MYB46(3)   gaaatctttcatagaatcggttcctattgttgttgaactcttagctctctatcgttaagttttcgttttcctggaaatgtaatcaacgaacattagattc  9836100                                                                                             --------                                                                                           <---------MYB52(2)                                                                                       --------->At4g35610                                                                                       <---------At4g35610                                                                                      ----------->RAV1(1)                                                                                    --------->ZAT2      <---------HSFB2a(1)                                                           <---------At4g35610      <---------HSFC1(2)                                                            <---------ZAT2      --------->HSFB2a(1)                                                           --------->At4g35610      --------->HSFC1(2)                                                           ----------->RAV1(1) <-------TEIL             <---------TOE2(3)                             <---------ANAC58  <---------At4g35610 --TEIL       <---------YAB1                                            <---------ANAC46  --------->At4g35610 --------ARR14(2)    <---------MYB46(3)                                 <---------ANAC58  --------->ZAT2 ------->ARR14(2) <-----------RAV1(1) ----------->GT1       ----------->GT1     --------->ANAC58 --------GLK1(2) <---------YAB1  <---------YAB1           ----------->GT1       --------->ANAC58  ---   agattcgaaatttcttagtattgttgttgagatttatgaatggtgaatttgtttttgcagaggtgaaaaatgagtcgtggtaacgcagcagcagctaagg  9836200                                                                               --------->HSFC1(2)                                                                               <---------HSFC1(2)           --------->HSFB2a(1)                                                 --------->HSFB2a(1) <-           <---------HSFB2a(1)                                    <---------ANAC58            <------ZmHOX2a(1)           <---------HSFC1(2)                        --------->ARR11(3)        <---------HSFB2a(1) <- ->MYB52(1)--------->HSFC1(2)                      <---------TOE2(3)  <----------DOF2    <------ZmHOX2a(1) ------->DOF2                                  --------->YAB1     <---------ANAC58    <-----------RAV1(2)   gaaagaagaagggagtttccttcactatcgattgttctaaacctgtggatgataagattatggagattgcttctttagagaagtttcttcaggagaggat  9836300               --------->ALFIN1           --------->DAG2          ==============================================bZIP_DOF          ---------->DOF2       <---------MYB46(3)     <---------ANAC46    <------MYB83    <---------MYB46(3)    <------MYB46(1)   <---------DEAR3(1)   --------->ALFIN1   <---------AtMYB61   --------->MYB111(2)   --------->MYB46(2)   --------->MYB111(1)                        --------->O2               --------->At4g35610        -   <---------MYB46(3)                         <---------O2               <---------At4g35610      <--   --------->MYB55(2)                         <---------TGA1a      <-----------HVH21              ---  <--------P   <-----------RAV1(1)            --------->TGA1a <------ZmHOX2a(2)                ------ --------TOE1(3)              --------->GLK1(2)              <---------ARR11(3)         <------------ --------TOE2(3)   <---------ZAT18        --------->ZAT6     --------->ARR11(3)   <---------WRKY38(1)   taaggttggtggtaaagctggtgctcttggtgattctgtttctatcactcgtgagaagagcaagatcactgtcactgctgatggtcaattctccaagagg  9836400  Previous    Next  AGI:  At5g27770.1    Description:  60S ribosomal protein L22 (RPL22C). Identical to 60S ribosomal protein L22-3 (RPL22C) [Arabidopsis Thaliana] (GB:Q9FE58); similar to 60S ribosomal protein L22-2 (RPL22B) [Arabidopsis thaliana] (TAIR:AT3G05560.1); similar to 60S ribosomal protein L22-2 (RPL22B) [Arabidopsis thaliana] (TAIR:AT3G05560.3); similar to 60S ribosomal protein L22-2 (RPL22B) [Arabidopsis thaliana] (TAIR:AT3G05560.2); similar to hypothetical protein [Vitis vinifera] (GB:CAN64416.1); contains InterPro domain Ribosomal protein L22e; (InterPro:IPR002671) Range:  from: 9835889    to: 9837345    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version