Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                            --------->AHL20(1)      --------->ARR14(2)                                                                  <---------AHL20(2)      <---------ARR14(2)          ----------->GT1                                         --------->ARR11(3)     <---------CCA1(2)           <---------TOE2(3)                                        <---------ARR11(3)   --------->YAB1              ---------->DOF2                               <---------AHL20(2)<-----  <-------TEIL            --------->ANAC58          <-----------GT1     <---------AHL20(2)<---------AHL20(1) ------ALFIN1             --------->ANAC58      <---------AHL20(2)     --------->AHL20(2) --------->AHL20(2) -----REM1(2)          <---------ARR14(2)      <---------AHL20(1)  <---------YAB1        --------->AHL20(2) -->ETT(2)             --------->ARR14(2)      <---------AHL20(2)  --------->ICU4 <-----------GT1   < ---ETT(2)          --------->AHL20(2)         --------->AHL20(2)--------->YAB1<---------AHL20(2)  --   cacattcatatctgtaaaccaaaaaaatacgcacaaaggtaaatttcaattttttttcttcatcatatgatgattttatatttttttcaaaatatattca  9763700                                                                          <---------TOE2(3)                                                                        ---------->DOF2                                                                      <xxxxxxxxxxxxxxxxsmallRNA(s)                                                                    --------->ZAT18                                                                    <---------ZAT18                                                                   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                                                  --------->ZAT18                                                                  <-----------------------TaNAC69(2)                                                                 --------->ALFIN1                                                              <---------------AtSPL8                                                              --------->DAG2                                                            ---------->DOF2----------->GT1                                                            xxxxxxxxxxxxxxxxxxxxxx>smallRNA(s2)                                                          xxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                                                         xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)              --------->AHL20(2)                       xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(s2)      --------->bZIP60(1)                            <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)      <---------bZIP60(1)                          xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)   <---------YAB1                                xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3) ----AHL20(2) <---------AHL20(2)                 xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3) ---------AHL20(2)                              <---------AHL20(2)<-------TEIL ------->AHL20(2)    <---------ZAT6             --------->AHL20(2)<---------ZAT18          <---------   attttatgatgtcaatataaatagtgttttaaaacactgtttatacatatataaatctgaataaaaggtgcgcacaaaggtaaaatttcaatttttcttc  9763800                                                      ----------->GT1                                                     ------>ZmHOX2a(2)                                                    --------->CCA1(2)                                                    <------ZmHOX2a(2)                                                   <---------ARR14(2)                                           --------->ZAT18                              <---------ARR11(3)   <---------AGP1              ----------->GT1                            <---------ARR11(3)     --------->ARR14(2)         <---------TOE2(3)                  <---------DAG2           <---------ZAT18                  ---------->DOF2                  <----------DOF2 <-------TEIL     --------->AGP1       --------->ZAT18               <-----------GT1--------->AHL20(1)   <---------ARR11(3)   <---------ZAT18           <---------AHL20(2) --------->ARR11(3)   --------->ARR11(3)---------->DOF2--------->ICU4          --------->AHL20(2)--------->AHL20(1)   ----------->ARR10--------->ANAC55(2)           <---- --GT1<---------YAB1        <---------AHL20(1) ---------->DOF2    <---------ANAC55(2)<---------ICU4   atcacaagatgattttataacttttctcaatatatattcattttgtacacaaagatctgaaaaaaaacaggtaatgcacaaaggtaaaaatttcaatttt  9763900                                                                  <---------ARR14(2)                                                                  --------->ARR14(2)                                                                  ------->TEIL                                                        --------->YAB1 <---------MYB52(1)                           --------->TOE2(3)           <---------AHL20(2)         --------->TOE2(3)--                  <---------YAB1                      --------->AHL20(1)          --------->TOE1(3)--               <---------AHL20(2)                     <---------AHL20(1)      --------->AtMYB61  ----  <---------YAB1  <---------AHL20(2) >>>>>>>>>SARD1   --------->AHL20(2)     <---------MYB52(2)  ==== -------GT1   --------->AHL20(2)     >>>>>>>>>CBP60g --------->YAB1  --------->ANAC46 ---------->DOF2   tcttatcaatagttgattttataattgtttcttaatgaaatttgggtaatttcaaatataatcacatgtatccgttaccacaaaccctaaaagaaaccca  9764000                                   ------->TEIL                               ------->MYC2                               ------->PIF5                               <-------MYC4                               <-------PIF5                               <-------MYC3                               <-------MYC2                               ------->MYC4                               ------->MYC3                              --------->TGA1a                              --------->O2          --------->At5g28300 <---------ANAC46             --------->AHL20(2)         ----------->GT1      <---------TGA1a   --------->ANAC46      --------->MYB52(1)      <--------ABF1  <------ZmHOX2a(2)     ----------->HVH21        <---------ANAC55(2)     ------------>CBF    <---------MYB52(2)        <---------O2  --------->ARR11(3)   --------->At4g35610   --------->ANAC58  <---------At4g35610<---------AHL20(2)  --------->ANAC58 ------->ANAC58          --------->ANAC58  --------->At4g35610--------->AHL20(2)--------->MYB52(1) ------->ANAC58        =================bZIP_DOF--------->ANAC58        --------->AHL20(2)   <------- ------>DOF2           ---------->DOF2 <-----------HVH21   --------->YAB1   --------->AHL20(2)    <-- =======================================bZIP_DOF--------->ANAC58    <---------YAB1--------->ANAC58<--   aaagcatctaacggtgaaaacactgaaaagccacgtgtacgtttcagatcacgcacagcaataaaaaaatatgaaaaaataaaaacggaagtgcctattg  9764100                                                <---------ALFIN1                                                --------->ANAC58                                                --------->DEAR3(1)                                                --------->ANAC58                                              <---------ATERF1(1)                                            <------NtERF2                                           --------->LBD16                                         <---------LBD16                                        <---------ANAC58    --------->ANAC46                    <---------ANAC46 -----CBF                             *TSS--------->ANAC46                                       <--- -------ANAC58                       --------->ARR14(2)                                          ---- -------ANAC58           <----------DOF2<---------ANAC58                                         <---   gcttacaagttacaagtatcaagtcgtctttttattcaagtttcgcggcaacgcctctcttctcttctctctctctctcttctctctaattcaatccaaa  9764200                                                                 <---------HSFB2a(2)       <-----------GT1                                           --------->HSFB2a(2)      <---------CCA1(2)                                         ------>ZmHOX2a(2)   <----------DOF2                                             <------ZmHOX2a(2) ------>ZmHOX2a(1)                                            <---------ARR14(2) ------ARR14(2)                                               --------->ARR14(2) ----->ARR14(2)                     <-----------GT1      <-----------GT1            <----------DOF2 ------ARR11(3)                 <----------DOF2        <-----------HVH21          <---------At4g35610   atcctcttttatctctctctcgctctcgctctctctttaaacctctcttcgaatatttgtcaccgatctcgaacaaggtttttgagctttctcttctccg  9764300                                                          ------>ZmHOX2a(2)                                                         <------ZmHOX2a(2)                                               <------MYB46(1)                                               <------MYB83                                         --------->LBD16<---------ARR11(3)                                        --------->ANAC55(2)                                        <---------ANAC55(2)                                        <---------ANAC46--------->ARR14(2)                                    <---------ZAT2      <---------AGP1                                    --------->At4g35610 <---------ARR14(2)                                    <---------GLK1(1)   --------->ARR11(3)           <---------TOE2(3)         <-----------RAV1(1)        --------->ZAT2    ----------->ARR10   <---------TOE2(3) <---------DEAR3(2)                 <---------At4g35610 --------->AGP1    <---------TOE1(3) <------MYB83                <---------YAB1  <---------WOX13(1)--------->ATHB12      <---------TOE1(3) <------MYB46(1)         <---------GLK1(2) --------->ATHB12  <---------MYB52(1)    ---------->DOF2   agtcggtttctgtgttgtttcttcgtcgattcttattgagctccgtgattggtgagtagatctgttgatttgatttagggttttttaaaggttttaaaca  9764400                                                  >>>>>>>>>SARD1                                                  >>>>>>>>>CBP60g                                           <---------LBD16               <---------DEAR3(1)                                           --------->LBD16              --------->SPL7                                          --------->HSFB2a(2)          <---------ARR14(2)                                        ----------->RAV1(2)            --------->ARR14(2)                                   <---------GLK1(2)                 --------->LBD16                                   --------->ARR14(2)              <---------LBD16                                   <---------ARR14(2)           <---------ARR14(2)                           <----------DOF2<---------HSFB2a(2)   --------->ARR14(2)                 --  --------->ATHB12         <---------DAG2<---------LBD16 <---------GLK1(1)  <---------DEAR3(1)     <-   gaagtaattgggattgtttttgaacttcactttatcggattcttctggggaaatttgggatttgtggattccggttcggcgatgcgatttttgatttcga  9764500           <----------ID1           ----------->GT1          ----------->GT1                                       <-------GAMYB         --------->DAG2                                        <---------ANAC58        ---------->DOF2                                        <---------ANAC58  <----------DOF2                                   <---------YAB1                      <---------ARR14(2) ------->ARR11(3)                                  <---------TOE2(3)                    --------->ARR14(2) --------ARR11(3)                        <----------DOF2       <---------ANAC46         ------->TEIL<   agttctttcaaaaaggaaaaattctttgaaatttgaattctaacttttgaatttatgtttgggtttcgttgaaacgagtattggtatttgaatctggggt  9764600  Previous    Next  AGI:  At5g27610.1    Description:  DNA binding / transcription factor. similar to DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT3G05380.2); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G05380.3); similar to DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT3G05380.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO17588.1); contains InterPro domain Homeodomain-like (InterPro:IPR009057); contains InterPro domain DIRP (InterPro:IPR010561); contains InterPro domain Myb, DNA-binding (InterPro:IPR014778) Range:  from: 9764138    to: 9769906    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version