Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                <---------ANAC58              <---------ANAC58             <---------HSFC1(2)             --------->HSFC1(2)            ------->TEIL         --------->ANAC46                                                              <----------ID1         --------->ANAC58                                                          ---------->DOF2    <---------ZAT18                            <---------YAB1                  <----------ID1    --------->ZAT18                          --------->YAB1             --------->ANAC46 ------HSFB2a(2)        --------->AHL20(2)   <---------ICU4             --------->ANAC58 ----->HSFB2a(2)      <----------DOF2       <---------YAB1              --------->ANAC58            - ->ZAT18 --------->ANAC58             <---------ZAT6 <---------YAB1   --------->MYB52(1)            -   tacaagtggacacgaagcttgtgcctttaaatgtgaagaagtgttcatcataactgtgattagaagaagactaaacgaaatatgacaaagagacaaataa  9736300                             ---------->DOF2                           <-------TEIL               <---------ANAC55(2)               --------->ANAC58                                                                  <---               --------->ANAC58                                                                 <----               ----------->GT1                                                        <---------TOE2(3)              <-----------------------TaNAC69(2)                                      <---------TOE1(3) -------->TOE1(2)  --------->DAG2                                      <------------CBF         <---- -------->TOE2(2) ---------->DOF2                         <---------ARR14(2) ------------>CBF <------   aacctgcgaagaaggaaacgtaaagtagattcaaagcagagagacagagagcgaatagcgaatagtgaaggaagattgtggcaattttagggttttttgc  9736400                                             --------->ARR11(3)                                           ----------->ARR10                                  --------->SPL7                               --------->GLK1(1)                                  <-------TEIL                                 <---------GLK1(1)                               --------->ANAC55(2)                            <---------GLK1(2)        <---------ICU4         <---------ANAC55(2)                   ------>ZmHOX2a(2)       <---------AHL20(2)      <---------ANAC58                      <---------MYB59         --------   <---------AHL20(2)          <---------ANAC58                     <------ZmHOX2a(2)       <--------   --------->AHL20(2)          <---------ANAC46                    <-----------ARR10        --------- <----------DOF2               <---------ANAC55(1)----------->GT1  <---------ARR14(2)     --------->YAB1 --------->TOE2(3)            <-----------------------TaNAC69(2)   --------->ARR14(2)<---------MYB52(1) -------DOF2              --------->WOX13(1) <---------ARR11(3)    <---------AGP1   --------->LBD16 -----ANAC58            ------------>CBF <---------MYB52(1)       <---------CCA1(2)----------->GT1 -----ANAC58          ----------->GT1  <---------MYB46(3)         <---------ARR14(1)<-------GAMYB --- -----GT1           <------------CBF--------->MYB52(1)       <---------GLK1(1)--------->ARR14(2) ----   tttctttaattcattacatagaaattgtcaattacgtacaacggttagatattagtaaaatggaaatcggatctaattcagatttccgttaaaaataaat  9736500      <---------YAB1     <-----------GT1  <---------GLK1(2)  <---------ARR11(3)  --------->ARR11(3)                        --------->GLK1(1) ->AHL20(2)                                 <---------GLK1(1)    ----------->TBP -AHL20(2)                        <---------AHL20(2)         --------->AHL20(2) >AHL20(2)                        --------->AHL20(2)  <-----------GT1   --------->TOE1(3)   <-------- ------->DOF2                    <-----------------AGL3      ------------>CBF  ------------>CBF   <-- ----->AHL20(2)               --------->AHL20(2)    --------->AHL20(2)  --------->TOE2(3)   <--------   aaaagattttcattacagttactgaagaaaaatgaaataaatatggaaatcgaatttaacaaattcaatataaaccctaatcccaattctctgactttat  9736600         --------->ANAC58         --------->ANAC46            --------->REM1(2)   <----------DOF2                <---------ANAC46                --------->ETT(2)  ------>MYB83 -DAG2   --------->ANAC58   <----------DOF2    ------------>CBF   <---------ETT(2)  ------>MYB46(1) ---------GT1   ---------->DOF2 <---------At5g28300   <---------GLK1(2)   >>>>>>>>>TBF1 --DOF2<---------AtLEC2 <----------DOF2       ----------->RAV1(1)--------->DDF1 >>>>>>>>>MYB2   tttctctttgcaagaaactaaagcttctttctttcaccgtgtaaacaacaacaatggattcttcaatgtcgacgaagaagaaaaccaaattgtctgtgag  9736700              --------->ANAC58              --------->ANAC46              --------->ANAC58    <<<<<<<<<TBF1            ------->TEIL   ------>MYB46(1)             <<<<<<<<<TBF1            --------->ANAC58   ------>MYB83           <----------DOF2               --------->ANAC58                   ---------- <---------MYB59      <---------CCA1(2)         ---------->DOF2                          <---------TOE2(3)   aaaccaaacttgtttcaagaaatcgtctctttcttcttcttctactgcaaaaaagaccacgaatttgtctatgagagaagagaccatgtttaagaaagcc  9736800                                                                                                 ----                                                     <---------ANAC46                            <---                                                   --------->MYB52(1)                          <-----                                                  ----------->TGA1                --------->ARR11(3)                                                <---------ANAC58              <------NtERF2 ---------                                                <---------ANAC58             <------NtERF2  ---------                                            <---------YAB1                   --------->LBD16<--------                                         <---------AHL20(2)                <---------LBD16  <--------                  ----------->RAV1(1) <---------AHL20(1)                   <---------ANAC46<---------TOE1(2)    <----------DOF2                   --------->AHL20(2)           --------->ANAC58  --------->WOX13(1)  <---------At4g35610            <-----------HVH21----------->HVH21--------->ANAC58<------ZmHOX2a(2) >DOF2           ----------->HVH21    --------->AHL20(1)         <---------ICU4   <---------ARR11(3)   ttggagctttcaactctgtgcgacatcgaagtctgtgtcatatattatggtcgtgacggagaactcatcaagacatggccggaagatcaatccaaggttc  9736900                                                                                                  ---                                                                                                  <--                                                                                       ------>ZmHOX2a(1)                                                                                     ------>ZmHOX2a(2)                                                                                    <------ZmHOX2a(2)                                                                                   <---------GLK1(2)                                                                                   <---------ARR14(2)                                                                                   --------->ARR11(3)      <---------ANAC46                                                             <---------ARR14(3) <---------O2                                         --------->MYB46(3)           --------->ARR14(3) ----->HSFB2a(2)                                   <----------ID1                  --------->ARR14(2) ------HSFB2a(2)                                ---------->DOF2                    <---------ARR11(3) --TEIL                                      --------->ANAC58                     --------->RVE1(1) >HSFB2a(1)                              --------->ANAC46                        ----------->ARR10--- >HSFC1(2)                               --------->ANAC58                      ---------->DOF2    <-- -HSFC1(2)                               --------->ANAC58                  --------->TOE2(3)------>NtERF2 -HSFB2a(1)                 --------->ANAC46 --------->ANAC58             --------->ANAC46 --------->ANAC46   gagacatggctgagaggtttagcaaactacacgagagagagcgacgcaagaaaagaacaaacctttctctgtttctacgtaaaaagatcctcgacgacaa  9737000                                      ---------->DOF2       <------NtERF2          --------->ARR14(1)     --------->ETT(1)        --------->ARR11(1)         <-----------GT1     <---------ANAC46        <---------GLK1(2)<---------WRKY38(1)                    --------->LBD16   <-----------HVH21         --------->ARR14(2)  <---------ANAC46                   --------->LBD16 ------>AHL20(1)             <---------ARR14(2) <---------LBD16                  ------>MYB83      <- -------AHL20(1)            <------ZmHOX2a(1) --------->ETT(2)           <---------MYB52(1)        -- ------>AHL20(2)          <---------TOE2(3)   <---------WRKY12 --------->CCA1(2) -------->P        <- -------AHL20(2)       <---------REM1(1)   --------->ZAT18    <---------ARR11(3) ------>MYB46(1)   --   taaattgtcggagaaagtcttagagatgaaggattcgctagaaagtggtctacgggtattacaagataagcttctgttactccaacccgagaaccagacc  9737100                                                               --------->YAB1                                                              <---------YAB1                                                            --------->YAB1                                                            <---------ICU4            <---------ANAC46                               <---------YAB1            <---------ANAC58                             --------->YAB1            <---------ANAC58                            <------ZmHOX2a(2)           --------------->AtSPL3                      <---------ARR14(2)    <-----------HVH21                                  <---------ARR11(3)   <------MYB83--------->SPL7     --------->GLK1(2)    --------->ARR11(3)   <------MYB46(1)                --------->ARR14(2)   --------->ARR14(2)                      <-----  --------->MYB59         <---------HSFB2a(2)     =============HOX2a_HOX2a                     <----- --------ZAT2 --------->ALFIN1    ------->TEIL    ------>ZmHOX2a(1)                            <----- ------->ZAT2<---------SPL7       <---------ARR14(2)  <------ZmHOX2a(1)                    <---------ANAC46 --------STY1(2)          --------->HSFB2a(2)   ----------->RAV1(2)                     ----------->HVH21 ------->STY1(2)   <---------ARR14(2)           <---------LBD16<---------ICU4     --------->ATHB12<--   gagctaggtcagagccgtgcggtttcttccacaacgaatccattgtcttctcctgaggatcatcatcatcaacaatggacagaaccattggtgactggtg  9737200  Previous    Next  AGI:  At5g27580.1    Description:  AGL89; transcription factor. similar to sequence-specific DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT5G27944.1); contains InterPro domain Transcription factor, MADS-box; (InterPro:IPR002100) Range:  from: 9736654    to: 9737325    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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