Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                   <------ZmHOX2a(2)         <---------REM1(2)       ------>ZmHOX2a(2)      <------ZmHOX2a(2)     --------->ARR11(3)                                                                   <---------At4g35610     <---------ARR14(2)                ------>MYB46(1)                             <------ZmHOX2a(1)     <---------ARR11(3)                ------>MYB83                            <---------ZAT2     --------->GLK1(2)               <---------MYB59                           --------->ZAT2     --------->ARR14(2)       --------->YAB1           ----------->GT1         <---------At4g35610    <------ZmHOX2a(1)        <---------ATHB12       ---------->DOF2            --------->At4g35610    ====================HOX2a_HOX2a  --------->TOE2(3)----------->GT1 <-----------GT1     --------->At4g35610   agacgaggatctacaagggatcaacatagaaatcataaacctaatccaaaaactgaaagttaaaaccgatttcaacaattcagcaggaacacagctaaaa  9716000                                                          <------NtERF2                                                        <---------ANAC58                                                   <---------ICU4                                                  <---------YAB1                                                <---------ICU4                                                --------->YAB1                                               <---------YAB1                                             --------->YAB1                --------->DAG2                                            <------ZmHOX2a(2)    --------->YAB1                                           <---------ARR11(3)   <---------ATHB12     --------->ALFIN1                      --------->ARR11(3)  --------->ANAC58   <---------ANAC58     --------->ANAC58--------->HSFB2a(2)    --------->ANAC58   <---------ANAC58     --------->ANAC58<---------HSFB2a(2)   --------->WOX13(1)      <------ZmHOX2a(1)   <---------ANAC46---------->DOF2   --------->GLK1(2)  <---------ANAC58  ---------->DOF2   ttgaagcgtgatgcagagacataaagaagcaattctcaaattctagatcatcatcatcgcgtcgcaatcaaatggaaaaagggaagaaggagagaaacct  9716100                      --------->ARR14(2)                      <-----------ARR10                      --------->GLK1(2)                                                --------->CCA1(2)                      ------->TEIL                                                    --------->ARR11(3)                      <---------ARR14(2)                                              --------->AGP1                     <---------GLK1(2)                                                <---------ARR11(3)                   --------->ANAC46                                                  --------->GLK1(1)                   --------->ANAC58                                        <---------At4g35610     --       --------->WRKY12                                                 <---------MYB46(3)        <--       --------->WRKY38(1)                                             <---------AtMYB61         <---       ----------->HVH21                                               --------->ALFIN1<------ZmHOX2a(2)     <---------At4g35610                                               <---------DEAR3(1)   <--------     --------->At4g35610     <---------ANAC46                    <---------AHL20(2)  <---------GLK1(1)     --------->ZAT2--------->ANAC58                        ----------->GT1 --------->At4g35610   <---   gtatttctgctgaccgcgaacacgaatctcggcttggaacttggatttacaggtatcaagagggtataaaatggtggtgctgagaagagatccaatggct  9716200       <---------ANAC46       <---------ANAC58       <---------ANAC58      <------NtERF2    --------->ALFIN1   --------->ATERF1(1)                      --------->ARR14(2)  --------->ZAT2                            <---------ARR14(2)  <---------ZAT2                            <---------ARR11(1)                       <---------WOX13(1) <---------DEAR3(1)                         --------->ARR11(3)                     --------->ATHB12 <---------AtMYB61                         <---------CCA1(2)<<<<<<<<<TBF1          <---------ICU4 --------->ALFIN1                      <XXXXXXXXXXXXXXXXXXXXMIR774B               --------->ICU4 ------->LBD16                        ------->GAMYB      <<<<<<<<<TBF1            <---------YAB1 -------HSFB2a(2)                    <---------ALFIN1 <<<<<<<<<TBF1             --------->YAB1 ------LBD16                     <---------ATHB12  <<<<<<<<<TBF1               ----------->GT1 -ATHB12 <---------LBD16  <---------ARR14(2)<-----------ARR10           ----------->GT1 ---NtERF2<---------ANAC46--------->ARR14(2)<---------ARR11(3) <<<<<<<<<TBF1   --------->ICU4   ccggaggtggcttcggagatggattccaaatccaaatcaacacccatatcttcttcttcttcttcttcttcgaagagagaaatgataattgatggtatgg  9716300                                                                                <----------DOF2                                                                                ------>ZmHOX2a(1)                                                                          --------->TGA2(2)                                                                         <-----------TGA1                                                                        --------->bZIP60(1)                                                                        --------->O2                                                                        --------->TGA2(1)                                                                        <---------TGA2(1)                                                                        <---------bZIP60(2)                                                                        --------->bZIP60(2)                                                                        <---------ANAC55(2)                                                                        --------->ANAC55(2)                                                                        --------->ANAC58                                                                        <---------O2                                                                        --------->ANAC58                                                                        ===================bZIP_DOF                                                                        >>>>>>>>>>HY5                                                                        <---------bZIP60(1)                                                                        <---------TGA1a                                                    >>>>>>>>>ARR1       --------->TGA1a       <------                                                    >>>>>>>>>ARR2       <---------ANAC46      <------                                             --------->LBD16            ===================bZIP_DOF                                            <---------ANAC58           ----------->STF1       -------                                            <---------ANAC46           <-----------STF1      <-------             --------->ATHB12               <---------ANAC58          <---------TGA2(2)    <---------            --------->ICU4              --------->DAG2               ----------->TGA1      ----------  --------->YAB1                       ===========================================bZIP_DOF<---------- <------ZmHOX2a(2)                     ---------->DOF2   *TSS     <---------AtMYB61------------>CBF   gcgatcacaagagaatgattttcgtcttgggattttaaacaaaaagccgtgtaagattgttttttgtgatggtgacgtcatccttttcaatttttccttt  9716400                                                      <-------PIF5                                                      ------->MYC2                                                      <-------MYC3                                                      ------->MYC3                                                      <-------MYC2                                                      ------->PIF5                                                      ------->MYC4                                                      <-------MYC4                                                     <---------O2                                                     --------->O2                                                     <---------ANAC46                                                     --------->PIF3(3)                                                     <---------PIF3(3)             <---------WRKY38(1)                     --------->TGA1a             <---------WRKY12                        --------->bZIP60(2)            --------->WRKY18(1)                     <<<<<<<<<<AtbZIP1           <-----------HVH21                       <---------ALFIN1           <--------ZAP1                     --------->ALFIN1 ---------AGL15                          ---------->DOF2                                  <---------AHL20(2) ----DOF2 <---------DEAR3(2)             ======================bZIP_DOF                   <---------YAB1 -------->AGL15   --------->YAB1       <---------YAB1<---------TGA1a                     --------->YAB1 ----------AGL3  <---------ATHB12  --------->YAB1<----------------PIF3(2)                --------->AHL20(2) --GT1    ----------->GT1       --------->TOE2(3)<-----------------PIF3(1)          --------->MYB46(3) >ID1     <------MYB83        <---------------------WRI1                           --------->ANAC46 -GT1     <------MYB46(1)    <---------DOF5.7(2)<---------PCF5         <-----------GT1   <---------AHL20(1)   ttttggtttagtcggtcaaatcatagaatgtaaacgataatatcaaagtcgggccacgtggttttcatgtttaaaaccggcctctacccaatattatttc  9716500                               --------->YAB1                             --------->GLK1(2)                             --------->ARR14(2)                     --------->KAN4(2)                             ------->TEIL                          <---------HSFC1(2)                             <---------ARR11(1)                    --------->HSFC1(2)                             <---------ARR14(2)                ----------->GT1    --------->CCA1(1)                            <---------ARR14(1)             --------->ATHB12       --------->RVE1(1)                            <---------CCA1(2)             <-------TEIL        --------->AHL20(2)    <                       <---------ARR14(2)              ----------->GT1   --------->LBD16       ------                       --------->ARR14(2) --------->ZAT6 <--------P<---------HSFB2a(1)       ------->TEIL               ---------->DOF2 --------->TOE2(3) ---------->DOF2   --------->HSFB2a(1)    <---------ATHB12   gaattagggctaggcaaaaatgccgaattcgaatcttaatcgaaacactaccaaagaaggttgattagaaaattccccaaaaaaatatccaaatgaatct  9716600                 --------->ARR14(2)                                        <---------YAB1                <---------GLK1(1)                                         --------->AHL20(2)     <------MYB83<---------ARR14(2)                                       <---------AHL20(2)     --------->ANAC55(2)                                                 --------->AHL20(2)     <------MYB46(1)                                                 <---------AHL20(2)     <---------ANAC55(2)                                             --------->AHL20(1)    --------->MYB46(2)                                               --------->AHL20(2)    --------->MYB59<---------ANAC46                                 --------->AHL20(2)    --------->MYB111(1)    <---------AHL20(1)                   --------->LBD16              --------   <---------MYB55(1)      --------->AHL20(1)                  --------->ANAC46     ---------->DOF2 ---------ZAT6<---------ANAC58<---------AHL20(2)            <---------ARR14(2)   <---------ANAC55(2) --->TOE2(3)  <---------ANAC58--------->AHL20(2)            --------->ARR14(2) --------->AHL20(2)   tagagttaggtattttgggtatcggataatatataattcgaatcgaaactcgaactagttagtatccgaaaaaaattaaaattaagtaaagtcatcaatc  9716700                                                           <---------ANAC58                                                           <---------ANAC58                                                         <-----------GT1                                                 --------->AHL20(2)                                                 <---------AHL20(2)                                                --------->AHL20(2)  <---------AHL20(1)                                                <---------AHL20(2)  --------->AHL20(2)   <---------AHL20(2)    <---------AHL20(2)  ----------->GT1<----------DOF2          <---------AHL20(2)  --------->AHL20(2)    <---------AHL20(1)   --------->ATHB12       --------->AHL20(1) ->WOX13(1)            <---------CCA1(2)   <---------WOX13(1)       <---------ARR11(3)         <-----   catattatatagttttgagtaattcatatattttcgagtaatttgagtgattaaattagttactttccaatattttagataatttgtttatttgtttttt  9716800                                                                                 ----------->GT1                                                                                 --------->LBD16                                                                             <---------ARR14(2)                                                               <---------YAB1--------->ARR14(2)                                                            --------->ICU4------>ZmHOX2a(2)                                                     <---------ANAC58    <------ZmHOX2a(2)                                                     <---------ANAC46   <---------ARR14(2)                                                 <---------AHL20(2)     --------->ARR14(2)     ------                                              --------->AHL20(1)     --------->ANAC55(2)      <------                                              <---------AHL20(1)     <---------ANAC55(2)      -------                 <---------GLK1(2)            <---------ARR11(3)    <---------LBD16   ---------->DOF2 ------GT1  <---------AHL20(2)        <----------DOF2<---------ANAC58--------->ANAC55(1)----------->GT1   ctaccgagttttatttatagaatttggacattttcaaatacttttcaatattttttcttgtaattttgaatacggatcgaatccagataaaagttaatct  9716900  Previous    Next  AGI:  At5g27520.1    Description:  mitochondrial substrate carrier family protein. similar to mitochondrial substrate carrier family protein [Arabidopsis thaliana] (TAIR:AT3G05290.1); similar to mitochondrial FAD carrier [Cucumis melo] (GB:ABR67418.1); contains InterPro domain Mitochondrial substrate carrier; (InterPro:IPR001993); contains InterPro domain Mitochondrial carrier protein; (InterPro:IPR002067) Range:  from: 9714385    to: 9716357    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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