Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                <------                                                                                              -------                                                                                             --------                                                                                             <-------                                                                                             --------                                                                          <---------AHL20(2) <-------                                                                          <---------ICU4     <-------                                                                          --------->AHL20(2) --------                --------->YAB1                                        --------->AHL20(2)    ---------               <---------YAB1         --------->YAB1              --------->YAB1            <--------            <---------YAB1           <---------YAB1  --------->TOE2(3)<---------AHL20(2)  --------->ANAC58   ---------->DOF2      ---------->DOF2   <-----------GT1  --------->TOE2(3)  <-----------------AGL1 -----KAN4(2)--------->YAB1        --------->YAB1 <----------DOF2<---------ATHB12         --------->ANAC58   taaacaaaagtcttcttataataaacaaaagttttttttataataaacttctctttcttaacatcaaatcatataattttttctaacatggcaagatatc  9706000    ----------------------->TaNAC69(2)   --------->YAB1   <---------ICU4  <---------ATHB12 ---ARR11(3) -->ARR11(3)                                                                <-----------GT1 ->RVE1(1)                    <---------ZAT6                            --------->ARR11(3) --RVE1(1)                    ----------->GT1                           <---------AHL20(1)       <--- ->GLK1(1)              <---------YAB1                                  <---------ARR11(3)      <---- --CCA1(1)       <---------ANAC55(1)                                    --------->AHL20(1)     <----- --GLK1(1)       <---------ANAC55(2)                        --------->ARR11(3)              --------- ->CCA1(1)       --------->ANAC55(2)                        --------->AHL20(1)        <-------TEIL  < >ARR11(3)       --------->ANAC55(1) <-----------GT1        <---------ARR11(3)   ----------->TBP----- -ARR11(3)      <-------TEIL------>ZmHOX2a(2)              --------->AHL20(2) <---------YAB1<--------   tctaatcgttacacttgatacgtattgtgatcgtgttaattactaactcttagaaaccaaaatatatacaataagatattactataaatacatatatatt  9706100           <---------AHL20(2)           --------->AHL20(2)       --------->AHL20(2)                              <---------ARR11(3)       <---------AHL20(2)                       ----------->TBP   --------->AHL20(2)                         --------->HSFB2a(2) --------->AHL20(2)                           <---------HSFB2a(2) ------AHL20(2)                               <---------------AGL15                        --------->ZAT6 -----AHL20(2)                                --------------->AGL15                <------------CBF ----AHL20(2)    <---------YAB1              ======================================================== >AHL20(1) --------->AHL20(1)                ----------------->AGL3              --------->AHL20(2) ---------ICU4 --------->YAB1           --------->AHL20(2)                    --------->ARR11(3) ---->AHL20(2)<---------YAB1            <---------AHL20(2)     --------->YAB1 <---------ARR11(3)<---- -AHL20(1) <---------AHL20(1)     <------ZmHOX2a(1)---------->DOF2<---------ICU4 <---------AHL20(2)   aatttttatataatttattatcaaacatatatacaaggacatttatttctacaaaaagatagtattcataagtacaaatagattttattgatcacactaa  9706200                                                                                    <----------DOF2                                                                                    <---------DAG2                                                                                   <---------ANAC58         <---------AHL20(2)                         --------->GLK1(2)              <---------ANAC58      <---------ARR11(3)                        --------->YAB1            --------->ARR11(3)      --------->ARR11(3)                    <---------YAB1                <---------GLK1(2)      --------->AHL20(1)     ------>ZmHOX2a(1) <---------YAB1             <---------ARR11(3)      <---------AHL20(1)    --------------->AGL15 <---------YAB1      ---------->DOF2   ---------->ID1 ===========================================MADS_MADS       ----------->GT1    <---------ANAC58 -----TOE2(3)           --------->YAB1   <----------DOF2   <------ZmHOX2a(1)   <---------ANAC58   tgttcaaatatttttatgtaagaaaatcatcctaatatagtttcttttgattataatctgaggagataaactaaaagattttcttgctttttcgtttttg  9706300              <---------AHL20(2)             --------->AHL20(2)          <-----------TBP          <---------AHL20(2)          --------->AHL20(2)        ----------->TBP                                                         <---------YAB1        --------->AHL20(2)                                                   --------->ICU4     -----       <---------AHL20(1)                   --------->TOE2(3)        --------->YAB1            ------       --------->AHL20(1)            --------->YAB1                 <---------YAB1       --------->ANAC58      --------->AHL20(2)         ---------->DOF2                   <---------ARR11(3)    --------->ANAC58   acttcaaaatatatatataatacaaccatttgtaacaaagcataaacatcaaaaacaaaattaagtcaaaatcatagaaatgactattagcaagaaaatg  9706400                             ------->TEIL                            <---------CCA1(2)              ------>ZmHOX2a(1)                  --------->ARR11(3)                       --------------->AtSPL8                ----                  <---------ARR11(3)                       --------->LBD16                     <-----                  <---------ARR14(2)           <---------YAB1           --------->YAB1    <---------- ---->TOE2(3)     --------->ARR14(2)   --------->ATHB12  ----------->RAV1(2)              ----------- ----->GT1   ------>ZmHOX2a(1)  <----------DOF2----------->HVH21      <-----------GT1     <----------DOF2   ttaatcgtgtttgtcctgactatcttcgttgtatcttttggtcattgctctgatagttttcctggtactatttttcattatgcaaatgtttacttttatg  9706500                                                    <---------ZAT6                                                 <---------ICU4                                                <---------YAB1                                              <---------ICU4                                              -------->HAHB4                                              --------->ATHB12                                              --------->YAB1                                             --------->ICU4                                             <---------YAB1                                      <---------MYB46(3)                         --------->ANAC58                                     <---------MYB52(1)                          --------->ANAC58   --------->AHL20(2)            <---------At5g28300----------->GT1          --------->ANAC58   <---------AHL20(2)           --------->MYB52(1) <---------YAB1            --------->ANAC58 ------->GT1                    <-----------GT1 --------->ICU4           <---------TOE2(3) ----ANAC46                <---------YAB1   <---------TOE2(3)           ---------->DOF2 -----AGL15                <---------AHL20(2)<---------ATHB12       <------ZmHOX2a(1) ---->AGL15            <---------AHL20(2) <---------AHL20(2)      <---------TOE2(3)               ---   tgtaaataaatatgggtctattgattttttttattaacggttgtttaatgattattgttaaataggtttaggattaaagaagcaagcacataaacaatgc  9706600               <---------LBD16             <---------SPL7                                 ----------->GT1             --------->ZAT14                               --------->ALFIN1             <---------ZAT14                           <---------YAB1    --------->At5g28300   <-----       --------->ARR14(2)   <---------At4g35610     <---------YAB1      ----------->GT1--------->ANAC58   --------->ZAT14    <------ZmHOX2a(1)      <---------ANAC46    <---------ZAT14       --------->ANAC58 ------>ZAT14--------->REM1(2)            <-----------RAV1(1) <---------ANAC46       ---------->DOF2   tacagtccagacctgtgtacgggaggagacagcaaatgtgatatatgttgtgttcttataagtggtgtatactacggtaaatgtattcaaagcaaatgtc  9706700                                                                                                  ---                                                                                                  <--                                                                                                  ---                                                      <---------YAB1                              <--                                                     <---------AHL20(2)                           <--                                                     --------->AHL20(2)                           ---                                                    --------->YAB1                               ----                                                   <---------YAB1                                <---                                                --------->AHL20(1)                               <---                                               --------->YAB1                                    ----                                               --------->AHL20(2)                              ------                                            --------->YAB1                                  ---------                                        --------->ANAC46                                    <--------                                     --------->ARR14(2)                                    <---------ICU4                   --------->GLK1(2) <---------ARR14(2)            <----------DOF2       <---------ARR11(3)                 <---------AHL20(2)  ------->TEIL --------->AHL20(2)                     --------->GLK1(2) ----YAB1 --------->ZAT6 <---------ATHB12--------->LBD16        <-----------GT1      --------->YAB1 -   attgtttgaataagactaaataatctaatcaactatatgtatccgctaataatattataatctaattttctttgctaaaaacaaatttcataatctttaa  9706800     ---------->DOF2   <---------YAB1 --------->YAB1 -------->HAHB4                                                                                   --- <---------ICU4                                                                                  <--- ------>YAB1                                                                                     ---- -------ICU4                                                                                    <---- ------>ATHB51                                                                                  <---- ------ATHB1                                                                                    ----- ------HAHB4                                                   --------->AHL20(2)               ----- ----->HAHB4                                                   <---------AHL20(2)        --------->LBD16 ----->AHL20(2)                                            ----------->GT1              --------->RAP2.6(2) ------YAB1        --------->ARR11(3)               --------->AHL20(1)                 <---------LBD16 ------ATHB51      <---------ARR11(3)               --------->AHL20(2)              <xxxxxxxxxxxxxxxx ----->ICU4       --------->YAB1                    <---------AHL20(2) --------->HSFB2a(2)      <---- --->YAB1        ----------->GT1               --------->AHL20(1)      <---------HSFB2a(2)      ----- >TOE2(3)  <------ZmHOX2a(1)                   <---------AHL20(2)  <---------AHL20(2) --------->At4g35610 --DOF2   ----------->GT1                      --------->AHL20(2)  --------->AHL20(2) <---------At4g35610 -------->ICU4 ---------->DOF2          ----------->GT1  ---------->DOF2       <---------YAB1 -------   taattatgaaagaggaataaagataatttagaagtcaatgtaagataaataaaataaaataaagtttaattttttagaaagatgattcagccggactaga  9706900  Previous    Next  AGI:  At5g27495.1    Description:  ion channel inhibitor. similar to LCR50 (Low-molecular-weight cysteine-rich 50) [Arabidopsis thaliana] (TAIR:AT2G12465.1); contains InterPro domain Scorpion short chain toxin; (InterPro:IPR001947) Range:  from: 9706380    to: 9706723    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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