Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                          <----------DOF2                                   ------>MYB83                                   ------>MYB46(1)                                 <---------MYB59                                               XXXXXX                                --------->ANAC58                      ------>MYB83     <---------TOE1(1) ------>At5g28300               --------->ANAC46      <----------DOF2 ------>MYB46(1)  <---------TOE2(1) ------->GT1                    --------->ANAC58 ------>ZmHOX2a(1)  <---------MYB59 <-----------HVH21 >DOF2                       <<<<<<<<<<GATA-1<-----------GT1 ---------->DOF2        <---------PCF2   agtgaattgaacagaaacctcgtgattcttcgatacccaactctttgtttcctcttctttgcacaaagaaccaaactttgaaactgggtccgatgtgaaa  9690200                                                                                 <---------At4g35610                                                                                 --------->At4g35610                                                                             <-----------HVH21                                                                            --------->bZIP60(1)                                                                     <---------At4g35610            -            <---------HSFB2a(2)                                 ------>MYB46(1)<-----------RAV1(2) <-   >>>>>>>>>TBF1      <---------YAB1              <---------TOE2(3)  --------->At4g35610      <------ XXXXXXXXXXXXXXX>MIR2933A/B         <----------DOF2             ------>MYB83<---------bZIP60(1)   <--   tcgaagaagaaactcgagaaattgatgaaagtctcagacttttttgtggattaagaaaatgaaacctactgagatgcgatgtcagatgaagaagagtcat  9690300                                                   ---------->DOF2                                              <----------ID1             <---------ANAC46 --------->LBD16                        <------MYB83                     <---------ANAC58 -------->ANAC46                        <------MYB46(1)                  <---------ANAC58 --------LBD16         <----------DOF2  <---------MYB46(3)               <---------ANAC55(2) ---ICU4             *TSS              --------->MYB59          <---------MYB52(1) -------At5g28300  <---------CCA1(2) <---------MYB52(1)       <---------MYB46(3)   taccgcaatttctgtcttctcgtttcttttctaatcccagtttggttagagacaaaagaaatagccgttgctaatgcgtatgggatttgtttcttcgaac  9690400            ----------->GT1         ------>MYB46(1)         ------>MYB83         --------->MYB52(1)       <---------MYB59       --------->AtMYB61    ------>MYB46(1)         <---------MYB52(1)    ------>MYB83            --------->At5g28300  <---------MYB59          ----------->GT1                                    <----------ID1  <---------MYB46(2)    --------->MYB52(1)                                  ---------->DOF2  <---------MYB111(1)  --------->ARR14(2)              --------->TOE2(3)--------->TOE2(3)           -  --------->AtMYB61    <---------ARR14(2) ---------->DOF2       <---------GLK1(2)               -----   cataccaaaccaaaccgaaaatcaagaaccggtaaattcaaattgaaagtgaaactttcttaacaaaattctcacattaaaagacgaattgagtttaaac  9690500                                                   --------->ARR14(2)                                                   <---------ARR14(2)                                                 --------->LBD16                                               <---------LBD16                            ------>ZmHOX2a(1)             <---------------AGL15           <-----------GT1                   --------->ZAT6          --------->AtLEC2              <---------AHL20(2)             <---------MYB52(1) <---------HSFB2a(2)     <-----------GT1                  <---------AHL20(2)         <---------ARR14(2)    <---------YAB1 <-------GAMYB                       --------->AHL20(1)          --------->ARR14(2)  --------->YAB1 --------->At5g28300              <---------AHL20(2)  ----------->GT1 <---------MYB52(1)  --------->HSFB2a(2) ---------->GT1                   --------->AHL20(2)--------->GLK1(1)----------->GT1<---------YAB1 ---->MYB46(3)      ----------->GT1  <---------AHL20(1)--------->TOE2(3)     <-----------GT1     ----   cacggttaaaccatgctaaaccgagtaaaattacatttatatatttttaaccggaaatgttaaaccagaaccggttatttaacactattatcctcgaaga  9690600             --------->GLK1(2)                                               --------->ANAC58            --------->ARR14(2)                                               --------->ANAC58          *TSS                                                              --------->SPL7  <---------ANAC58                                                          <-------TEIL  <---------ANAC46                                                          --------->ZAT18  <---------ANAC58     <---------ANAC58                                   --------->ARR14(2)  <---------ANAC55(2)  <---------ANAC58                 <----------DOF2   <---------ARR14(2) --------->MYB52(2)<---------MYB52(1)               <----------DOF2     --------->LBD16 ------->GT1<---------GLK1(2)                <---------TOE1(2)--------->ANAC46                <------   ggttacttgaacacgattctcgttggcttcagacattttccatcttctaggtttctttctttctcagcaatttccaggtacgctgtttctgtctattcaa  9690700          <-------GAMYB           --------->ANAC58         <-----------RAV1(1)<------NtERF2    <----------DOF2        --------->LBD16               ---------->DOF2    <---------DAG2       <---------LBD16       --------->WOX13(1)           <---------AHL20(2)    --- ---AHL20(2)   --------->ARR14(2) --------->ANAC58--------->YAB1    <---------AHL20(2)           <---   tttctgcttttctgttgaattcgcattgccggaggtaagaaaatgaagtcaatgagaagaaaagaacgatttttttttttaattcccaacttgtgttcga  9690800                                                                                           <---------ZAT18                                                                                        -------->HAHB4                                                                                        --------->YAB1                                                                                        <---------ICU4                                                                                       --------->ICU4                                                                                      <---------AHL20(2)                                                                                     --------->YAB1                                                                                   <---------AHL20(2)                                                                                   --------->AHL20(2)                                                                                   --------->AHL20(1)                                                                                  --------->YAB1                                                                                 <---------ATHB51            <---------CCA1(2)                                                    <---------ATHB12        <-----------ARR10                                                   ------>ZmHOX2a(2)       <---------At4g35610                   >>>>>>>>>RAP2.2               <------ZmHOX2a(2)       --------->At4g35610                 --------->ARR11(3)             <---------ARR14(2)    <---------At4g35610                    <---------ARR11(3)            <---------At4g35610    --------->At4g35610                   --------->CCA1(1)              --------->At4g35610 --->ZmHOX2a(2)                       --------->AHL20(2)          <---------AHL20(2)<---------YAB1 ------GLK1(1)               <---------AHL20(2)            <----------DOF2--------->ARR14(2)   <-----   tctctgagcagctcttatctgatacaaccatttttttggatataatatctaaatttgtagtctttagtttaattcagatcccaattataataatgccctt  9690900                                                                <------MYB83                                                                <------MYB46(1)                              --------->YAB1                    ----------->GT1               --------->ANAC55(2)                     -------->ATHB1               <---------ANAC55(1)                     --------->ATHB51               <---------ANAC46                        <--------HAHB4               <---------ANAC58      --------->AHL20(2)--------->AHL20(2)               <---------ANAC55(2)<---------AHL20(2)  --------->ICU4 <---------GLK1(2)    --------->GLK1(2)        <---------ALFIN1      <--------HAHB4          <---------ATHB12                    ------->TEIL       ------>ZmHOX2a(2)     --------->ICU4  --------->LBD16   --------->MYB111(1)        --------->ARR14(2)  ------>ZmHOX2a(2)          <---------YAB1<---------LBD16 <---------AHL20(2)     <---------MYB46(3) <---------At4g35610 ---------->DOF2 <---------AHL20(2)<---------AHL20(2)      <-----------RAV1(1) -----DOF2     <---------ANAC58 <---------YAB1        <---------ATHB51--------->GLK1(2)   <---------ARR14(2)   ttgatctgatccacattgcgtatcaaaggctattattattttattcccagagttcaattatttagttggtagaatctctctgtgttgttgtgaatctgtc  9691000                                                                                    <---------YAB1                                                                                 <------ZmHOX2a(2)                                                                                <---------ARR11(3)                                                                                --------->ARR11(3)                                                                         ------>ZmHOX2a(1)                                                                         --------->HSFB2a(2)                                                                         --------->LBD16                                                                         <---------HSFB2a(2)                                                                         ===============HOX2a_HOX2a                                                                        --------->TOE1(2)                                                                        <---------LBD16             -                                                                       ----------->RAV1(2)          -                   --------->DAG2                          ---------->DOF2    ----------->ARR10   <--         <---------ATHB12                     <------ZmHOX2a(1)     <---------At4g35610   <----------       --------->WOX13(1)    <----------DOF2<---------TOE2(3)       <---------GLK1(1)<---------ICU4 -   tgtttatgtaaatcaattcaaaaggttgtgacttttgtgtttgacttaggaaaatggaagtgaaagctagagctcctgggaagatcatacttgcagggga  9691100  Previous    Next  AGI:  At5g27440.1    Description:  unknown protein Range:  from: 9689501    to: 9690321    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g27450.1    Description:  MK/MVK; mevalonate kinase. Identical to Mevalonate kinase [Arabidopsis Thaliana] (GB:P46086;GB:Q9STB1); similar to mevalonate kinase [Hevea brasiliensis] (GB:AAL18925.1); contains InterPro domain Ribosomal protein S5 domain 2-type fold (InterPro:IPR014721); contains InterPro domain Mevalonate and galactokinase; (InterPro:IPR006206); contains InterPro domain GHMP kinase, ATP-binding, conserved site; (InterPro:IPR006203); contains InterPro domain Mevalonate kinase; (InterPro:IPR006205); contains InterPro domain GHMP kinase, C-terminal (InterPro:IPR013750); contains InterPro domain GHMP kinase; (InterPro:IPR006204) Range:  from: 9690610    to: 9693231    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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