Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                               --------->AHL20(2)                           ------>MYB46(1)                        --------->ANAC58                                                         ----                      <---------bZIP60(1)                                           <---------ARR11(3)                   ----------->HVH21                                                --------->ARR11(3)              ------->GAMYB------>MYB83        --------->TOE1(3)                    <---------GLK1(2)        <----------DOF2 --------->ANAC58       --------->TOE2(3)                   <---------RVE1(1)- -GLK1(2)    --------->MYB46(3)   ---------->DOF2                --------->YAB1 --------->LBD16  ----   ctcttcaactctttaaccacagtgacaccaaataaacaaagccccaaaaccttcaaaaccaattcactcttaatctctatcccagagattttgcaaaaac  9689900                                                                      --------->HSFB2a(1)                                        <----------DOF2              <---------ARR11(3)                            <---------------AGL15                    <---------ARR14(2)                            --------------->AGL15                    --------->ARR14(2)                           <-----------------AGL3                    <-----------ARR10                           ----------------->AGL3                    --------->ARR11(3)                           <-----------------AGL2  ---------->ID1<xxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)           ------------------------>ANAC81  ---------->ID1     --------->WOX13(1)           --------- ----->TOE1(3)             ----------------->AG<----------DOF2--------->MYB46(3)  ------>ZmHOX2a(1) --------->DOF2            <-----------------AGL1  <-----------GT1  <---------CCA1(2)       --------- ----->TOE2(3)             ----------------->AGL2XXXXXXXXXXXXXXXXXXXXX>MIR472<---------ALFIN1     ---   cataaatccaaagaatcacacaaacaaaaaccaaaattggcactttgttctttttccttctccatccatcaaatcttccccatcctctccaaaaccctaa  9690000                               <------NtERF2                               ----------------->AGL2                              --------->ABI4(1)                              --------->ORA47(1)                             --------->RAP2.3(2)                             --------->RAP2.6(2)                             --------->DEAR3(1)                            --------->ORA47(2)                            --------->RAP2.3(1)                                            <---------ICU4                            --------->ERF1                                        <------MYB46(1)                            --------->ATERF1(1)                                   <------MYB83                            --------->DEAR4(2)      --------->CCA1(2)             <---------ANAC58                           <---------ATERF1(1)      <------ZmHOX2a(2)             <---------ANAC58---                  ------>ZmHOX2a(1)                <---------ARR11(3)            --------->MYB59 ----               ------>ZmHOX2a(1)                   --------->ARR11(3) <---------ARR14(2)   --------->YAB1              <---------ALFIN1------>NtERF2        <---------ARR14(2) --------->ARR11(3)   ----------   ------>ZmHOX2a(1)       <---------RAP2.3(1)     --------->AGP1   ----------->ARR10 <------NtERF2 >TOE1(3)   ------>ZmHOX2a(1)--------->RAP2.3(3)   --------->ARR14(2) --------->GLK1(2)   <---------ATHB12 >TOE2(3)------>ZmHOX2a(1)--------->ANAC46   --------->YAB1 <---------DEAR3(1)   --------->MYB46(2) ---->GAMYB<---------ALFIN1------>NtERF2    ----------->HVH21   ----------->GT1  --------->MYB111(1)   ccctcctcttcctcctcctcctccatctacgccgcccaaatcagcaatgacaagatccaagggctgtggtaaaatctggagattaggtgccaataaagac  9690100                                        <----------DOF2                                   ------>MYB83                                   ------>MYB46(1)                                 <---------MYB59                                               XXXXXX                                --------->ANAC46                      ------>MYB83     <---------TOE1(1) ------>At5g28300               --------->ANAC58      <----------DOF2 ------>MYB46(1)  <---------TOE2(1) ------->GT1                    --------->ANAC58 ------>ZmHOX2a(1)  <---------MYB59 <-----------HVH21 >DOF2                       <<<<<<<<<<GATA-1<-----------GT1 ---------->DOF2        <---------PCF2   agtgaattgaacagaaacctcgtgattcttcgatacccaactctttgtttcctcttctttgcacaaagaaccaaactttgaaactgggtccgatgtgaaa  9690200                                                                                 <---------At4g35610                                                                                 --------->At4g35610                                                                             <-----------HVH21                                                                            --------->bZIP60(1)                                                                     --------->At4g35610            -            <---------HSFB2a(2)                                 ------>MYB46(1)<-----------RAV1(2) <-   >>>>>>>>>TBF1      <---------YAB1              <---------TOE2(3)  <---------At4g35610      <------ XXXXXXXXXXXXXXX>MIR2933A/B         <----------DOF2             ------>MYB83<---------bZIP60(1)   <--   tcgaagaagaaactcgagaaattgatgaaagtctcagacttttttgtggattaagaaaatgaaacctactgagatgcgatgtcagatgaagaagagtcat  9690300                                                   ---------->DOF2                                              <----------ID1             <---------ANAC58 --------->LBD16                        <------MYB46(1)                  <---------ANAC46 -------->ANAC46                        <------MYB83                     <---------ANAC55(2) --------LBD16         <----------DOF2  <---------MYB46(3)               <---------ANAC58 ---ICU4             *TSS              --------->MYB59          <---------MYB52(1) -------At5g28300  <---------CCA1(2) <---------MYB52(1)       <---------MYB46(3)   taccgcaatttctgtcttctcgtttcttttctaatcccagtttggttagagacaaaagaaatagccgttgctaatgcgtatgggatttgtttcttcgaac  9690400            ----------->GT1         ------>MYB83         ------>MYB46(1)         --------->MYB52(1)       --------->AtMYB61       <---------MYB59    ------>MYB83            --------->At5g28300    ------>MYB46(1)         <---------MYB52(1)  --------->AtMYB61        ----------->GT1                                    <----------ID1  <---------MYB59       --------->MYB52(1)                                  ---------->DOF2  <---------MYB46(2)   <---------ARR14(2)              --------->TOE2(3)--------->TOE2(3)           -  <---------MYB111(1)  --------->ARR14(2) ---------->DOF2       <---------GLK1(2)               -----   cataccaaaccaaaccgaaaatcaagaaccggtaaattcaaattgaaagtgaaactttcttaacaaaattctcacattaaaagacgaattgagtttaaac  9690500                                                   --------->ARR14(2)                                                   <---------ARR14(2)                                                 --------->LBD16                                               <---------LBD16                            --------->HSFB2a(2)             <---------------AGL15           <-----------GT1                   --------->ZAT6          --------->AtLEC2              <---------AHL20(2)             <---------MYB52(1) <---------HSFB2a(2)     <-----------GT1                  <---------AHL20(2)         <---------ARR14(2)    <---------YAB1 --------->At5g28300                 <---------AHL20(1)          --------->ARR14(2)  --------->YAB1 <-------GAMYB                    --------->AHL20(2)  ----------->GT1 <---------MYB52(1)  ------>ZmHOX2a(1) ---------->GT1                   <---------AHL20(2)--------->GLK1(1)----------->GT1<---------YAB1 ---->MYB46(3)      ----------->GT1  --------->AHL20(1)--------->TOE2(3)     <-----------GT1     ----   cacggttaaaccatgctaaaccgagtaaaattacatttatatatttttaaccggaaatgttaaaccagaaccggttatttaacactattatcctcgaaga  9690600             --------->GLK1(2)                                               --------->ANAC58            --------->ARR14(2)                                               --------->ANAC58          *TSS                                                              --------->SPL7  <---------ANAC46                                                          --------->ZAT18  <---------ANAC58                                                          <-------TEIL  <---------ANAC55(2)  <---------ANAC58                                   --------->ARR14(2)  <---------ANAC58     <---------ANAC58                 <----------DOF2   <---------ARR14(2) --------->MYB52(2)<---------MYB52(1)               <----------DOF2     --------->LBD16 ------->GT1<---------GLK1(2)                <---------TOE1(2)--------->ANAC46                <------   ggttacttgaacacgattctcgttggcttcagacattttccatcttctaggtttctttctttctcagcaatttccaggtacgctgtttctgtctattcaa  9690700          <-------GAMYB           --------->ANAC58         <-----------RAV1(1)<------NtERF2    <----------DOF2        --------->LBD16               ---------->DOF2    <---------DAG2       <---------LBD16       --------->WOX13(1)           <---------AHL20(2)    --- ---AHL20(2)   --------->ARR14(2) --------->ANAC58--------->YAB1    <---------AHL20(2)           <---   tttctgcttttctgttgaattcgcattgccggaggtaagaaaatgaagtcaatgagaagaaaagaacgatttttttttttaattcccaacttgtgttcga  9690800  Previous    Next  AGI:  At5g27440.1    Description:  unknown protein Range:  from: 9689501    to: 9690321    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g27450.1    Description:  MK/MVK; mevalonate kinase. Identical to Mevalonate kinase [Arabidopsis Thaliana] (GB:P46086;GB:Q9STB1); similar to mevalonate kinase [Hevea brasiliensis] (GB:AAL18925.1); contains InterPro domain Ribosomal protein S5 domain 2-type fold (InterPro:IPR014721); contains InterPro domain Mevalonate and galactokinase; (InterPro:IPR006206); contains InterPro domain GHMP kinase, ATP-binding, conserved site; (InterPro:IPR006203); contains InterPro domain Mevalonate kinase; (InterPro:IPR006205); contains InterPro domain GHMP kinase, C-terminal (InterPro:IPR013750); contains InterPro domain GHMP kinase; (InterPro:IPR006204) Range:  from: 9690610    to: 9693231    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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