Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                  --------->ZAT14                                                                --------->REM1(2)                                                                <---------ZAT18                                                                <---------ZAT14                                                              --------------->AtSPL8          --------->ANAC46                              --------->ARR11(3)          --------->ANAC58                              <---------ARR11(3)  XXXXXXXXXXXXXXXXXXXX>MIR416                           --------->ARR14(2)            <---------AHL20(2) ----->AHL20(2)          <---------TOE2(3)              <---------ARR14(2)           --------->AHL20(2) ------AHL20(2)     --------->ATHB12                    <---------ARR11(1)  <----------DOF2 ->GT1    --------->ANAC58       ---------->DOF2       <---------CCA1(2)    <---------DAG2         --   taattcgtatgcacacaatccatgatttatgttttaaaagacatatgaacacaatccatatctctgtgtacaatctaacttttcgaaataaatctaaaca  9687000                                                                 <---------ICU4                                                                <---------AHL20(2)                                                                --------->AHL20(2)                                                                <---------ATHB51                                                        --------->WOX13(1)                                                     --------->TOE2(3)                                                     --------->YAB1                                                   --------->AHL20(1)                                                  --------->AHL20(2)--------->AHL20(2)   <------MYB83              <---------ICU4                      --------->YAB1--------->ICU4           <------MYB46(1)             <---------YAB1                     --------->AHL20(2)  <---------AHL20(2) <---------WOX13(1)       ----------->GT1                       --------->AHL20(2)--------->AHL20(2)    --------->ATHB12  --------->AHL20(2)                       --------->TOE2(3)   <---------AHL20(1)   <---------YAB1 ------->DAG2<---------AHL20(2)         ----------->RAV1(1)--------->YAB1         --------->YAB1<----   aaaattgaatagtttataatttcaaagtttgcaattcaaatccaacataaaataatattaatcaaaataattaagtagaaacaattttgattggttttat  9687100                                                              --------->ARR14(2)                                                        ----------->HVH21                                                      <------MYB46(1)                                                      <------MYB83                             ------>MYB46(1)         <---------MYB46(3)                             ------>MYB83            --------->MYB46(2)     <----------DOF2                           --------->AtMYB61  --------->MYB52(1)         <-----------GT1                          --------->MYB46(3)--------->MYB46(3)<---------ARR14(2)      <---------RAP2.6(2)      <-----------GT1  <----------ID1 --------->ZAT6 <---------AtMYB61--------->YAB1 --------->RAP2.6(3) -----YAB1   <----------DOF2----------->RAV1(1)    <---------MYB52(1)--------->AHL20(2)    ----------   gcttagttttactaactttgccattacgaccaacaatttttcactaacaatcggtttggtgacagaaccgattaataactttgccattacggccaacaat  9687200                                    --------->YAB1                                    --------->ATHB51                                    <---------ICU4                                    <--------ATHB1                                    <---------AHL20(1)                                    --------->AHL20(2)                  <------MYB46(1)      <-------                                   <---------ATHB51                 <---------HSFB2a(1)  <------ZmHOX2a(2)                               <------ZmHOX2a(2)                    <-----------RAV1(1) <---------ARR11(3)         --------->MYB52(1)    <---------ATHB12                 --------->LBD16         --------->ARR11(3)       --------->MYB46(3)<---------ARR14(2)                   <---------LBD16   <---------YAB1 --------->ZAT6          --------->ARR14(2)    --------------->AtSPL8   <------MYB83  <---------YAB1 ->RAV1(1)    <---------MYB52(1)   <---------ATHB12     --------->YAB1  <---------MYB46(3)<<<<<<<<<<<   ttttcactaacaatcggtttggagacagaaccgatcaataattttctaaaccgtactattgtaaaccggaatgttggtttatatgattaagatcacattg  9687300                                                                        --------->YAB1                                                                       <---------YAB1                                                                      --------->AHL20(2)                                                                      <---------AHL20(2)        --------->O2   --------->YAB1                            --------->AHL20(1)        --------->ANAC55(2)                      --------->ICU4  --------->AHL20(2)        <---------ANAC58       <---------At5g28300           --------->AHL20(2)  *TSS        <---------ANAC58      <-----------GT1 --------->AHL20(2) <---------AHL20(1)   --------->ZAT6     <---------ATHB12  --------->ANAC58     <---------AHL20(2) <------ZmHOX2a(1) <-----------GT1    --------->WOX13(1)  --------->ANAC58    <---------YAB1     ----------->GT1 -----CBF         ------------>CBF  <-----------HVH21       --------->ICU4     <----------ID1 ------- <<<<<<LFY <-----------HVH21<-----------HVH21 <---------AHL20(2) <---------AHL20(2)          <-------TEIL   gtataactctacgtgtctcgtccaatcacatttcacagcgtcaaggaaataaatattagataattaataaattttaataagaggaaaaaaaaacattcat  9687400                      --------->ZAT2               ------>MYB46(1)                      --------->At4g35610          ------>MYB83                      <---------ZAT2             --------->AtMYB61                      <---------At4g35610        <---------MYB59                 <---------MYB46(3)              <------NtERF2               =================================HOX2a_HOX2a     <<<<<<<<<TBF1  <------NtERF2         <------ZmHOX2a(2)            <-------TEIL  <<<<<<<<<TBF1   <---------DEAR3(1)     --------->ARR11(3)         <------ZmHOX2a(1) -->YAB1    <---------DEAR3(1)           <---------ARR14(2)   ---------->DOF2<----------DOF2   cttcttcttcttcgtcggagtcggagcagagaaaggttttggagatcgagaccaaactccgattgaaagaggatgcattcttttggttacagagcgaatg  9687500                                                                                               ------                                                                                             --------                                                                                            <--------                                                                                          --------->CCA1(2)                     --------->GLK1(2)                                                    <------ZmHOX2a(2)                  <---------YAB1                                                         --------->ARR14(2)               ----------->HVH21                                                         <---------ARR14(2)               <------NtERF2                                                             --------->AGP1              <-----------HVH21                                                        ----------->ARR10              <-----------TGA1                                                     --------->ZAT2              <---------RAP2.6(3)            <---------ANAC58                      <---------ZAT2              ------>NtERF2 <----------DOF2  <---------ANAC58                      <---------At4g35610             <---------ATERF1(2)      --------->LBD16                              <---------ZAT14             --------->DEAR3(1)      <---------ANAC58                              --------->ZAT14             --------->RAP2.6(2)     <---------ANAC46                              --------->At4g35610             --------->ANAC46        <---------ANAC58                  --------->TOE2(3) --------->ARR11(3)             --------->RAP2.3(3)    <---------LBD16     --------->YAB1--------->MYB46(3)--------->At4g35610   ctctactcacattcgccgtcacgattctagctttcatttgcgcgattgcttccttctctgataacttcagtaaccaaaatccctctgctcagatccaggt  9687600                                                                                            <--------                                                                                            ---------                                                                               ------>ZmHOX2a(1)                      ------>ZmHOX2a(2)                                       --------->TOE1(3)                     --------->GLK1(1)                                        --------->TOE2(3)                     <---------GLK1(1)                                       ------>ZmHOX2a(2)                    <---------ARR11(3)            <---------AtLEC2          <------ZmHOX2a(2)       <      ----------->GT1<------ZmHOX2a(2)   ------>ZmHOX2a(2)                 <---------ARR11(3)      <- <---------MYB59    --------->ARR11(3) <---------ARR11(3)                  <---------ARR14(2)      <- --->ARR14(2)      <---------GLK1(1)   ------->TEIL                        --------->ARR11(3)      <- ->LBD16  --------->MYB52(2)           <---------AGP1                      --------->ARR14(2)-------- ---RAV1(2)        --------->GLK1(1)   --------->ARR11(3)<-----------GT1   --------->AGP1   <--------   atgcctaattgttaattgcagagatctcttattgtatcatggatctatgtgtgcatgttttacttcaagttgttttagatccttaattttgctggattct  9687700                                                 --------->HSFC1(1)                                                 --------->HSFB2a(2)                                                 <---------HSFB2a(2) -GLK1(2)----------->GT1                         <---------HSFC1(1) >ARR14(2)                                      <---------LBD16 -------GAMYB                               <---------KAN4(1) --------ANAC46                             --------->KAN4(1) --------ANAC58                        <---------TOE1(3) --------ANAC58       <---------MYB46(3) <------ZmHOX2a(1)                                          < ->GLK1(2)           --------->ICU4    <---------TOE2(3)                          <---------ANAC46 <- -ARR14(2)      --------->YAB1      <---------AHL20(2)        <----------DOF2  <----------DOF2  <----   ggcgttgtagttggaaaattgtaatggttagagggaattttaaggattgttctggaagtttgttctttgagtttgaagaaacttttgtggagcctgattt  9687800            <---------ANAC46            <-----------RAV1(1)      <---------WOX13(1)    --------->YAB1    <---------ICU4    -------->HAHB4    <--------ATHB1    --------->ATHB12   <---------ATHB12     <---------ARR11(3)   --------->ICU4       --------->ARR11(3)   <---------YAB1<---------ANAC58                    -------->P             ----------->GT1  <---------TOE2(3)     <---------ARR14(2)       --------->ANAC58          <---------TOE2(3) --------->YAB1  <---------ANAC46                --------->ANAC58          <---------TOE1(3) ---------AHL20(2)      --------->ARR14(2)       --------->ANAC46     <---------TOE2(3)             - --------AHL20(2)<---------ANAC58            <---------HSFB2a(2)  --------->YAB1                   <- -----AHL20(2) <---------MYB46(3)            --------->HSFB2a(2) --------->ICU4         -------------   ttttaatgattgttctgtggtttgcagatattgaatatcaattggtttcagaagcaacctcatggaaatgatgaggtaaggtttcatactcttgcctctt  9687900  Previous    Next  AGI:  At5g27430.1    Description:  signal peptidase subunit family protein. Identical to Signal peptidase complex subunit 3B [Arabidopsis Thaliana] (GB:Q53YF3); similar to signal peptidase subunit family protein [Arabidopsis thaliana] (TAIR:AT3G05230.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO17648.1); contains InterPro domain Signal peptidase 22 kDa subunit; (InterPro:IPR007653) Range:  from: 9687381    to: 9689423    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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