Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                        <---------TOE2(3)                                                               <---------TOE2(3)                                                         <---------AHL20(2)                                <-------TEIL            <---------AHL20(1)                               --------->CCA1(2)        --------->AHL20(2)         --------->YAB1                            <---------TOE2(3)           <---------AHL20(2)        --------->AHL20(2)                          <-----------GT1               --------->AHL20(1) ----------->GT1    <------    <---------ATHB12---------->ID1                 --------->AHL20(2) <---------TOE1(3)       -------   aaacaaatcaacgcatagttttgtttttttaagatacaaatagttagagaacataaaataaaatttagatttaaggttagaaaaataaaaatcgaataaa  9656600                                                            --------->AHL20(2)                                                            <---------AHL20(2)                                                          <----------DOF2                                             --------->AHL20(2)         <---------GLK1(2)                  <---------AHL20(2)     <----------DOF2     ---------->DOF2                        --------->AHL20(2)  <-----------GT1  <---------At4g35610                 --------->YAB1--------------->AtSPL8                        ---  --------->At4g35610                 --------->AHL20(2)  --------->TOE2(3)                 <-------- ----------->RAV1(1)             ----------->GT1    --------------->AtSPL3                --------->TOE2(3) ---AHL20(2)                --------->AHL20(2)     --------->At4g35610      <----------DOF2 --------- -->AHL20(2)             ----------->GT1--------->ICU4  ------->TEIL    <----------DOF2   <----------DOF2   atgcagcaaaagattatctataacatgtgataaaatggaataatatttaaaatagctgtactttaatttcttttctttcttttggtgcaaaactttaatt  9656700                                                                          --------->ARR11(3)                                                                         --------->CCA1(1)                                                                    --------->AHL20(2)   ------------         <---------AHL20(2)                   ------>ZmHOX2a(1)     --------->YAB1       <-----------         <---------AHL20(1)                  --------->TOE2(3)  --------->AHL20(2)       --------->MYB59         --------->YAB1      ----------->RAV1(2)                <---------AHL20(2)     <---------MYB52(1)         --------->AHL20(2)  --------->At4g35610   <---------AHL20(2)    --------->RVE1(1)        <---------ATHB12--------->YAB1 <---------ICU4       --------->ICU4<---------ARR11(3) ------>TOE2(3)     ----------->GT1    --------->ATHB51    --------->AHL20(2)        <---------ZAT6 -AHL20(2)      <-----------GT1----------->HVH21   --------->AHL20(2)  --------->AHL20(2)------------ >AHL20(2)<---------AHL20(2)--------->GLK1(2)--------->TOE1(3) --------->AHL20(2)  <-------TEIL   tcttaaaccaataaaatttaactggataataatctgacccataatttccttaataaaacataaaaattaataaaaaaatctcacatacagttaagtacaa  9656800                             <---------ALFIN1                             <---------------AGL15                             --------------->AGL15                           --------->ANAC46                          --------->ANAC46                         <---------ALFIN1                        <---------ATERF1(1)                       <---------ATERF1(1)                       <---------ALFIN1                      <---------ALFIN1                      <---------ATERF1(1)                                             <---------AHL20(2)                     <---------ALFIN1                                                <---------AHL20(1)                     <---------ATERF1(1)                                             --------->AHL20(2)                    --------->ANAC46                                                 --------->ARR11(3)                    <---------ALFIN1                                                 <---------ARR11(3)               <-----------GT1                                                       --------->AHL20(1)            --------->ARR11(3)                                                       <---------AHL20(2)          --------->ARR11(3)--------->LBD16    <---------ANAC55(2)                --------->AHL20(2)      <---------MYB52(1)<---------ALFIN1       --------->ANAC55(2)                --------->YAB1 --->AtSPL3 <---------ARR11(3)           --------->ICU4                  <---------ICU4 ----AtSPL8 --------->AHL20(1)      ----------->GT1              <---------ATHB12<---------ATHB51 --->AtSPL8--------->CCA1(2)----------------->AGL3             --------->WOX13(1)<---------ATHB12   tccaatcccttagatatattcccccccccccccaattgaagtaaaaatcaagtattaagagttaacaatcactaagcattccaataatatatttttcaat  9656900                   <---------MYB59                    --------->TOE2(3)                  --------->bZIP60(1)           --------->bZIP60(1)                  <---------bZIP60(1)           <---------bZIP60(1)           <-----------HVH21                  --------->TGA2(1)             <---------TGA2(1)           <-------MYC3    ---------                  <---------TGA2(1)             --------->TGA2(1)           ------->MYC3 --------->YAB1         <---------YAB1 <----------DOF2      ----------->HVH21    <---------TOE2(3)   <----------DOF2        >>>>>>>>>>>>>>>>>LFY                <-----------HVH21    ---------->DOF2      ---------------       <-----------GT1  <---------DAG2     ----------->GT1      --------->AHL20(2)    <--------------   ggaatggaattaccattgtgacataactttttgttttttgtcaaactgtgacataacataaaaccattaaagaaaacatgtgtccctcctttaataagaa  9657000                                                                          --------->ANAC58     <----------ID1                             --------->ANAC58          --------->ANAC58          < <------------CBF                               --------->ANAC58       <---------ZAT18     <---------HSFB2a(2) >YAB1                                   ------>ZmHOX2a(1)         <---------HSFB2a(2)     --------->HSFB2a(2) >AGL15                              <xxxxxxxxxxxxxxxsmallRNA(fl3) --------->HSFB2a(2)  <-----------GT1 -AGL15   --------->MYB52(1) *TSS<---------ALFIN1              <----------DOF2     <---------AHL20(2)   gcacattgtgacaaacagagcattctctctctctcacactctcctctgtctcgctacctctgtctctttctcgagcactcactgttttatttaccagaaa  9657100                                     --------->ALFIN1                                  --------->ALFIN1                                  <---------AtMYB61                <-------TEIL --------->YAB1               --------->AtLEC2<---------AtMYB61        <--------HAHB4       -------->HAHB4                               --------->At4g35610        --------->YAB1      --------->ICU4    ---------->DOF2             <---------ZAT2        <---------ICU4  --------->AHL20(2)---------->DOF2                 <---------At4g35610       <       <---------YAB1--------->YAB1  <---------ANAC46                     --------->ZAT2         ---- -----------RAV1(1)--------->AtLEC2<---------MYB46(3)              <----------DOF2 XXXXXXXXXXXXXXXXXX   ttgtgttgtatcattacatgcatgcataaaatgatggtggtggagaaagaaagaagcatagaagaaaggcttttgcagctcaagaaccaaaacgacgatt  9657200               <---------ANAC58                                                                <-----          <-----------GT1  ------>ZmHOX2a(1)                                                 <-------     <---------ANAC58     --------->TOE2(3)                      <---------ANAC58           <--------     <---------ANAC58     --------->TOE1(3)            <----------DOF2                      <--------     <---------ANAC46   <---------YAB1         --------->ALFIN1  <---------ANAC58        ------>ZmHOX2a(1) ---------GLK1(2)  <---------ZAT6            <---------ANAC46   <---------AtMYB61       --------->TOE2(3) ----->YAB1    <---------ANAC58              --------->ALFIN1 <----------DOF2     <---------ANAC58 XX>MIR3933    <---------ANAC46   <----------DOF2 <---------MYB46(3)              <---------ANAC58   cagaatgtcgtattactgcttgtgttatccttagtactttcatcgctgtgtgtggttctttctcctttggtgtctctgtgagtttcttatcctcatcatt  9657300                                                                                ----------->GT1                                                                                --------->ANAC58     <---------ANAC58                                                           --------->ANAC58     <---------ANAC58   ----------->GT1             <-------GAMYB          <---------------AtSPL8 <----------DOF2 <---------------AGL15             <-----------RAV1(1) <---------AHL20(2)           < ----YAB1        --------------->AGL15         <----------DOF2         --------->ATHB12            <- --ICU4         <---------ANAC58           <----------DOF2            <---------AHL20(2)         ---- -YAB1          <---------ANAC58        <-----------GT1               --------->AHL20(2)        ----- -ATHB12      <-----------GT1        <---------AHL20(2)               --------->ICU4     <----------DOF2   cttctttgcttagttttttcttgatatagtaaaaagaatttttttctttctttctgttgtcaacttattgtattaattgggaacgaaaaaactttacaag  9657400                        <----------DOF2                       --------------->AGL15                       --------->TOE2(3)         ----------->RAV1(1)         ------->GAMYB <---------------AGL15        --------->MYB46(3)  ---------->DOF2   --------->YAB1<----------DOF2          <-----------GT1                                   ---------   <-----------GT1  <-----------GT1    <---------ICU4                          <----------DOF2 ---------ICU4<---------ARR11(1)      --------->ICU4                           --------->TOE2(3) --------YAB1 <---------ARR11(3)      <---------AHL20(2)           --------->TOE2(3)      --------->ANAC58 ----->YAB1   --------->ARR11(3)      --------->AHL20(2)          --------->YAB1          --------->ANAC58 ------>GT1  <---------CCA1(2)   ----------->GT1------->GAMYB    >>>>>>>>>MYB98--------->TOE1(3)   gataattacaaccacatatcttttacctttaaaagaagaaaaaattacaaccccatgctatgggtttaacataaaaaaaaactttaaaaaccaagaaagg  9657500  Previous    Next  AGI:  At5g27360.1    Description:  SFP2; carbohydrate transmembrane transporter/ sugar:hydrogen ion symporter. Identical to Sugar transporter ERD6-like 18 (SFP2) [Arabidopsis Thaliana] (GB:Q94CI6); similar to SFP1, carbohydrate transmembrane transporter/ sugar:hydrogen ion symporter [Arabidopsis thaliana] (TAIR:AT5G27350.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO68583.1); contains InterPro domain General substrate transporter; (InterPro:IPR005828); contains InterPro domain Major facilitator superfamily; (InterPro:IPR007114); contains InterPro domain Sugar transporter, conserved site; (InterPro:IPR005829); contains InterPro domain MFS general substrate tra Range:  from: 9657029    to: 9662562    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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