Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                  -----            --------->ANAC46                                                                 --------            --------->ANAC58                                                                 --------      ------>ZmHOX2a(1)                                                                      --------     --------->TOE1(3)                                                                    ------>ZmHOX2a(1)     --------->TOE2(3)                                                           --------->ANAC58 ----->ANAC58                                                                    --------->ANAC46 ----->ANAC58                                                                  ----------->RAV1(1) -->GAMYB --------->ZAT6                                                      --------->MYB46(3)----- ----ALFIN1 --------->ANAC58                      --------->YAB1  <---------YAB1 --------->ANAC58  --   cccatttccttaacacgaccctcaacaaaacccattaacaaatccatttcaatcttcaacatgaaattctcatcgctcgaaccacacaactcctcacgaa  9634600                                <---------ARR11(3)                           ------>MYB83                           -------->P                        --------->MYB46(3)           <---------HSFB2a(2)                        --------->DEAR3(2)           --------->HSFB2a(2)                       ------->TEIL         --------->HSFB2a(1)                    --------->ANAC58       <---------ARR14(2)                    --------->MYB46(3)     <---------ARR11(1)                    <---------MYB52(2)     --------->ARR14(2)                    --------->ANAC58       --------->GLK1(2) ---->ANAC58       --------->SPL7          ------->TEIL                                            -- ->ANAC58         --------->MYB52(1)    --------->MYB46(3)               <---------MYB52(1)        <- ->ANAC58       --------->LBD16 --------->ARR14(2) ----------->RAV1(2) <-----------RAV1(1)       <--- ->ANAC46  <----------DOF2 ------>MYB46(1)<---------ARR14(1)     <-------TEIL                  ------ ---->ANAC58   <---------HSFB2a(2)      <---------ATHB12        --------->GLK1(2)            -------- -------->DOF2 --------->HSFB2a(2)------>ZmHOX2a(2)================================RAV       <-------   gcaaagtcttctcctttcccgaacgaaccaactcgatctccaacgaatctttcgcctggaagagagattcaatctgttgtctcttctccatagtctgctt  9634700         <----------DOF2   <---------GLK1(2)   --------->ARR14(2)                         <------ZmHOX2a(1)   <---------ARR14(2)                      --------->LBD16 ------->At4g35610                         <---------HSFB2a(2)                                <------ --------At4g35610                      ------>ZmHOX2a(1)                                     ------- --------RAV1(2)         --------->GLK1(2) --------->HSFB2a(2)           --------->ANAC58    <------- --------------->WRI1   <---------GLK1(2) <---------TOE1(1)              --------->ANAC58 <---------GLK1(1) ->At4g35610 --------->ANAC55(2)  <---------DAG2                --------->YAB1      <---------ANAC46 --At4g35610 <---------ANAC55(2)  <----------DOF2         ------>ZmHOX2a(1)        <-------TEIL   cagaagaatcgcattaagtgacttcaaattctgaaacttttcctccgaggagtcatggtcctccattgatgactcacgacttagcttcgtcgatttctgg  9634800                                                                                                   <-                                                                                                   --                                                                                                   <-                                                                                                   --                                                                                                   --                                                                                                   <-                                                                                                   <-                                                                                                  <--                                                                                                  <--                                                                                                  <--                                                                                                  ---                                                                                                 <---                                                                                                 <---                                                                                                 <---                                                                                                 <---                                                                                                 <---                                                              --------->ANAC46                   <---                                                 --------->ATHB12                                <---                                             <---------At4g35610                                 <---                                             --------->At4g35610                                 ----    <---------ANAC46                 --------->ATHB12       <---------ANAC55(2)                  <--- ----------->HVH21             <---------At4g35610          --------->ANAC55(2)                 ----- ---HSFB2a(2)              <-----------RAV1(1) <<<<<<<<<<<<<<<<<LFY <----------DOF2     --------->ANAC58 -->HSFB2a(2)    <---------GLK1(2)  <---------YAB1        <-----------GT1<<<<<<<<<TBF1  --------->ANAC58 --LBD16      <---------WOX13(1)  <---------At4g35610     --------->CCA1(2)  --------->ANAC46 -------   gaagtgactggtactgactgattctgaatttgttgctgctcattggaagctccattggagttacgagacactttcttcttcgccatttgaacggaagtgg  9634900     <---------ARR11(3)     --------->ARR11(3)   ----------->ARR10 --------At4g35610 ------->ATERF1(1) -----NtERF2 ------->At4g35610 ------->ZAT2 --------ZAT2 ------GAMYB -------ERF1 -------RAP2.3(1) -------MYB46(3) --->NtERF2<---------TOE2(3) ------RRTF1(2) ------RAP2.3(3) ------RAP2.3(2) ------DEAR3(1) ------ATERF1(2) ------ANAC58 ------RAP2.6(2)                                          ---------->DOF2 ------ANAC46             --------->ALFIN1           <---------At5g28300 ----->ATERF1(2)       <---------TOE2(3)            --------->MYB52(1) ------ANAC58          <---------TOE1(3)        <----------DOF2                      --------->CCA1(2) ---->RAP2.6(3)   <---------MYB46(3)  ---------->ID1<-----------GT1                *TSS -->ALFIN1 <---------TOE1(3)        <-----------RAV1(1) --------->At5g28300  --------->MYB52(1) <----   cggctgagattttagggttttggttagggtttgggtttttgttgctacggcttttaacggtgaagcgagagagaagactaaacgaagagacgaagttttg  9635000                                                                                 <------MYB83                                                      <---------DAG2             <------MYB46(1)                                                      <----------DOF2       --------->ATHB12                                           <---------YAB1                  <---------YAB1                                         --------->ATHB51 <---------YAB1   --------->ICU4                                         <---------AHL20(2)          <---------TOE1(3) -----LBD16          <----------DOF2     --------->AHL20(2)          <---------TOE2(3)    <----------DOF2   ggggaaattttgaaaatttcaaactttagggtctaattttgaattatttttgagagctttttgattcagtgaaggttatgatttggtttacactttctta  9635100                                                           <---------ANAC55(2)                                                 --------->YAB1                                  <---------ICU4<---------YAB1                                  <---------AHL20(2)       --------->ANAC55(2)                              <---------YAB1  --------->YAB1                        <----------ID1---                              <---------------AGL15   <---------YAB1              ---------->DOF2 <--                              --------------->AGL15--------->ICU4              <---------ANAC55(2)<--                     ----------->GT1   <---------AtLEC2   <-------TEIL    <---------ICU4         <---              <---------ZAT14 =======================================================================   tataacagttagagaccacagtgttgttatttctaattaatgcatgaactataattttgatacgtttcattttgaaatattacataaagacaaatgacta  9635200                                    ----------->GT1                                                <-                                --------->YAB1                                 <-----------GT1     <-                                <--------HAHB4                           <---------YAB1           <--                               <---------AHL20(2)                     <---------YAB1              ---                             --------------->AGL15                    --------->ICU4             ----                             <---------------AGL15                  <--------HAHB4        <------MYB46(1)   <---------YAB1           <-----------------AGL3                  <---------ICU4        <------MYB83 <-----------GT1            ======================================================================MADS_MADS --------->YAB1             ----------------->AGL3                  --------->YAB1--------------->AGL15 ------>YAB1              --------->ARR11(3)        --------->At4g35610 <---------AHL20(1)<---------ANAC55(2) ------HAHB4              <---------ARR11(3)        <---------At4g35610<---------ICU4    <---------TOE2(3) -------ICU4             <---------CCA1(2)          <---------ZAT2 <---------ATHB12      --------->MYB59 ------YAB1     ----------->GT1<---------YAB1   >>>>>>>>>WRKY18    <---------YAB1 <---------------AGL15 =============================================MADS_MADS            --------->ICU4<-----------------AGL3   taattacaattgctcaaattgtaacatatatctataattagttaaaattttgacagctgtttaaaactaatcattattttttaactaaaattaggtatat  9635300                             <---------YAB1                           --------->ATHB12                           <---------ICU4                          --------->ICU4                       <---------YAB1                                                       <--------                       --------->ICU4                                                      <---------YAB1     <-----------GT1 --------->CCA1(2)                           --------->GLK1(2)         --------->ICU4 --------RVE1(1)    <---------ARR11(3)                           <---------ARR11(3)      --------->YAB1 --------CCA1(1)    --------->ARR11(3)                           --------->ARR11(3)    <-----------GT1 -------ARR11(3)    --------->ARR11(1)                          --------->RVE1(1) --------->AHL20(2) ------>ARR11(3)---------->DOF2   ---------->DOF2         <----------DOF2     --------->AHL20(2) ----->YAB1--------->LBD16<---------YAB1          --------->CCA1(2)          --------->AHL20(2)   gatattttgaccccccaaaaaagatatgattattagaaaagactaaaattagatatgtttctttaaaaatcttgggaaaataaaaaatataacataatta  9635400                                  <---------AHL20(2)                                  --------->AHL20(2)                                 --------->AHL20(2)                                 <---------AHL20(2)                              --------->ATHB12                             <---------AHL20(2)                            <---------WOX13(1)       <---------YAB1     --------->YAB1                                                    <--------     <---------AHL20(2)   <---------ICU4                                                   --------->AHL20(2)  <---------ICU4          -------->ATHB1                                                  <---------YAB1 --------->AHL20(2)       <--------ATHB1                                                 --------->AHL20(2) <---------AHL20(2)       --------->ATHB12                                             --------->AHL20(1) --------->ICU4           --------->ATHB51                                            --------->YAB1 <---------ATHB12        --------->ICU4                       <-----------GT1         --------->AHL20(2) <---------ATHB51        <---------ATHB12         ----------->GT1           <-----------HVH21 -ICU4 <---------TOE2(3) <---------ATHB51  <---------------AGL15 <----------DOF2    --------->AHL20(2)   caaataattaagtttggacacatatcaataattgattaaattttgacatatatagttaacaatataacttttgatatgtgtcagaaaataatattatata  9635500  Previous    Next  AGI:  At5g27330.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G05130.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO68600.1); contains InterPro domain Prefoldin (InterPro:IPR009053) Range:  from: 9632706    to: 9634983    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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