Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                  --------->AHL20(2)                                                <---------AHL20(2)                                         ------>MYB83                                         ------>MYB46(1)                                        --------->MYB52(1)                                       --------->AtMYB61                                       --------->TOE2(2)                                      <---------MYB55(2)                                  <---------ANAC55(2)                                      <---------MYB52(2)                                  <---------ANAC46                                      --------->MYB46(3)                               --------->ICU4                                     --------->ANAC58                               <---------YAB1                                     --------->ANAC58                             ----------->GT1                                    --------->WOX13(1)          --------->YAB1--------->AHL20(1) -------AHL20(2)                   <---------WRKY38(1)   --------->ICU4       --------->ARR11(3)  <-- ------AHL20(1)                    <---------WRKY12 --------->YAB1            <---------AHL20(1)  --- ----->AHL20(1)                   --------->WRKY18(1) <---------YAB1        --------->AHL20(1)    --- --->AHL20(1)                    <-----------HVH21 <---------YAB1           <---------AHL20(1)   <--- ----AHL20(1)         <---------TOE2(3)------->GAMYB--------->AHL20(2)      <---------ARR11(3)   ----   atattttcatacaattactgaatttatgtagtttgggtcaaccaacgtttttaattataaatattagcataaatacaatatatattgtgattatgtgaat  9628700        <---------YAB1      <--------HAHB4      --------->YAB1      <---------ICU4                                                    <---------ICU4     <---------------AGL15                                              <--------HAHB4     <---------ATHB12                                              ----------->GT1   <-----------GT1                                               --------->ARR11(3)   --------->WOX13(1)                                     <---------O2 <---------YAB1  <---------AHL20(2)                                      --------->ANAC55(2)  --------->AHL20(2)                                      <---------ANAC46 --------->AHL20(2)                   --------->AHL20(2)  <---------ANAC55(1) -------AHL20(2)                      --------->AHL20(1)  ----------->GT1 ------>AHL20(2)                      <---------AHL20(2)  <---------ANAC58 ------>AHL20(1)                     --------->AHL20(2)   <---------ANAC55(2) ------AHL20(2)          <---------AHL20(2)               <---------ANAC58 <-----------GT1 ----->AHL20(2)         --------->AHL20(2)       <----------DOF2 <---------ARR11(3)              <---   taaattaatcattttagaaaacaaaattttatataagaaaaaaattgttttctttttgttacgtgaatatcgtattattacatttttcacaaacaaaaaa  9628800                                                                         <---------------AtSPL8     -                                                                         --------------->AtSPL8     -                  <---------ANAC58                                    --------->AHL20(1)            -                  <---------ANAC46                                   --------->YAB1               ---                  <---------ANAC58                              --------->AHL20(2)                <--               <--------P                                      --------->AHL20(2)                ----              <---------MYB52(1)                         --------->AHL20(2)    --------->ICU4    ----              <-------GAMYB   <---------TOE2(3)         --------->AHL20(2)   ------->TEIL        ----             --------->LBD16  <---------TOE1(3)  --------->ANAC58  --------->AHL20(2)          <----- -------ID1<---------LBD16  ---------->DOF2      --------->ANAC58  <---------AHL20(2)         <------   aaacaaattgttttccggttgcgaacagattaaaggttttatatttttcaaacgaaaaataaaaaataaaaaaataatgtacttattttcatgaggtcca  9628900          <-----------HVH21     --------->MYB46(3)                                                                           ---   ----------->RAV1(1)                                                           <---------MYB52(1)  --------->MYB46(3)                                                         ------>NtERF2        --- ---------->RAV1(1)                                                         --------->ANAC46      <-- ----->MYB83                                                               --------->SPL7        ---- ----->MYB46(1)                                                            ------>MYB46(1)     ------ ------>MYB46(3)                                                           ------>MYB83        <----- -------MYB55(2)                                                         --------->TOE1(2)     ------ ----->ANAC58                     <---------ANAC58                       --------->TOE2(2)    ------- ----->ANAC58          <---------ANAC58                                -------->P--------->ARR14(2) ----->ANAC46          <---------ANAC58        <-----------GT1  <---------ALFIN1 <---------ARR14(2) ----ALFIN1   --------->ZAT6      <---------ANAC58   --------->ZAT14<---------MYB52(2)      --------- -TEIL------->GAMYB    <---------ANAC46--------->LBD16          ----------->RAV1(1)        --------->MYB46(3)   cccaacaacagtcgtcacactagtcgcgttggacttgcatgcgcatattatactctatagtcaaacccacactaacctacgccgatattcttatccacca  9629000                                              <---------ANAC46                                              <---------ANAC58 ------>AtMYB61                           <------------CBF                                   -------- ------>DEAR3(1)                         --------->ATHB12                           ----------->TGA1 -------ALFIN1                           --------->ATHB51                           ----------->HVH21 ----->MYB46(3)           <---------MYB52(2)  <---------ANAC58      --------->TOE2(3) <---------TOE2(3) --->DEAR3(1)           <-----------GT1  <---------ICU4            ----------->GT1 ------>ZmHOX2a(2) ----ALFIN1       --------->AHL20(2)    --------->ICU4       --------->AHL20(2)   --------->At4g35610 --->AtMYB61      <---------AHL20(2)  <---------ICU4         <---------AHL20(2)   <---------At4g35610 -->MYB46(3)     --------->AHL20(2)   --------->YAB1    --------->LBD16    <---------DAG2 *TSS >ANAC46  --------->At4g35610-------->P <---------YAB1 <---------ANAC46 <-----------GT1<---------ANAC46   ccacctcttattagctcaaaaaaatttcactaacccatagtcattattgcttatactccgtattaaaaaatgttaaaccttttgatctgacgtttaaaag  9629100                                                                                        ------>ZmHOX2a(2)                                                                                      <---------ARR14(2)                                                                                      --------->ARR14(2)                                                                         --------->At4g35610                                                               <-----------GT1        <---------AGP1                                                              <-----------GT1  --------->ARR14(2)                --------->LBD16                             --------->HSFB2a(1)<---------ARR11(3)               <---------HSFB2a(2)                          <---------HSFB2a(1)<---------ARR14(2)<---               --------->HSFB2a(2)                          <---------HSFC1(2) --------->ARR11(3)<---     <----------DOF2        <----------DOF2                 --------->HSFC1(2)<---------CCA1(2)  <--- -->DOF2 <---------------AGL15                      --------->ATHB12     <---------At4g35610  <------   caggtttctttctatttccagataaaaaaactttactcatcgagactcgtttagtgattcgaaatttcccttctcggctcaaatcttcgatctgggcttt  9629200                   <------MYB83                   ----------->GT1         <---------ANAC58         <---------ANAC58  ---------->DOF2        ---------->ID1   <---------AHL20(2)       <-----------GT1   --------->YAB1   <----------DOF2 <------MYB46(1) ------ANAC46    <---------WOX13(1)                      <---------ANAC46     <---------YAB1 ------ANAC58  --------->ATHB12               <---------DAG2                 --------->YAB1         < ------ANAC58 <---------YAB1       <----------DOF2  <---------AtLEC2         --------->TOE2(3)   ---- ----DOF2<---------ANAC46--------->AHL20(2)   <----------DOF2         ----------->GT1            <---   cgtgtctttttgcgttttgattggtaataaaaagaagctttttaaaaactttttccatggctggaagtgaagaagttaatcttattgagagcaaggtaag  9629300                --------------->AGL15                                         <---------YAB1                <---------------AGL15                                   ----------->ARR10              <---------At4g35610                                   <---------MYB46(3)           <----------DOF2                                          <------MYB83   <---------AHL20(2)                                               <------MYB46(1)   <---------YAB1                                     xxxxxxxxxxxxxxxx>smallRNA(i) ----------DOF2<-----------------AGL2         --------->KAN4(1)    --------->MYB59 ----->ARR11(3)<-----------------AG           <---------KAN4(1) <---------MYB46(3)<-------TEIL ------ARR11(3)<-----------------AGL3  <---------AtLEC2     <-----------RAV1(1)<------ZmHOX2a(1)   acctttttattgactttgctgattttgggtattatctgtgttcatggattgttcttagttttctggtgtttggttagattaggattcatatgtgttttgt  9629400                                                         <---------ANAC58                                                         <---------ANAC46                                                         <---------ANAC58                                                   <---------DREB2C(2)                                                   --------->ETT(1)                                                   <---------At1g77200                                                   <---------DEAR3(1)                                                --------->ALFIN1                                               <-------MYC3                                               ------->MYC3                                              =================================bZIP_DOF                                              <---------ANAC58                                              --------->ANAC55(2)                                              <---------ANAC58                                              <---------ANAC55(2)                                              --------->O2                                   --------                                              <---------O2  --------->ATHB12       <---------GLK1(1)                                    <---------ANAC58  --------->ARR14(2)           --------->GLK1(1)                                    <---------ANAC58<---------MYB46(3)           <------ZmHOX2a(1)                                    <---------ANAC46<---------DEAR3(2)   <---------------AGL15                       <----------DOF2--------->ALFIN1<---------ARR14(2) --------------->AGL15                       =================================bZIP_DOF        =============================           ---------->DOF2     <---------MYB52(1)<-----------HVH21      <-----------------AGL3 <-----           =============================================bZIP_DOF        <-----------------AGL2<------          --------->YAB1  --------->YAB1      <---------TGA1a       <----------DOF2--------->At4g35610   tttgttttgtaatcaaagcttagaactttcatcgtttggggtgatgaaacgtgtcggttccttgatgggtctttactaatttaggagctctccttggctt  9629500     <----------DOF2                                                                       <---------ARR11(3)    <---------ANAC58                                                                       --------->ARR11(3)    <---------ANAC58                                                                    <---------ICU4   ---------->ID1                                                              --------->ALFIN1 -->ID1                                                                      --------->ANAC55(2) ===========MADS_MADS              <---------WOX13(1)                        <---------ANAC55(2) ---- -----DOF2                      ----------->HVH21                        <-----------HVH21<---------CCA1(2) -----------AGL3       ----------->HVH21  <---------YAB1                <---------ZAT6  --------->YAB1   tatttggcttttagtttttttttctctgacccttgtgactgattttgattttgttattccatgaactgtttctactgtcaagtgttgtaatcatatctct  9629600  Previous    Next  AGI:  At5g27320.1    Description:  ATGID1C/GID1C (GA INSENSITIVE DWARF1C); hydrolase. Identical to Probable gibberellin receptor GID1L3 (GID1L3) [Arabidopsis Thaliana] (GB:Q940G6); similar to ATGID1A/GID1A (GA INSENSITIVE DWARF1A), hydrolase [Arabidopsis thaliana] (TAIR:AT3G05120.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN65915.1); contains InterPro domain Alpha/beta hydrolase fold-3; (InterPro:IPR013094); contains InterPro domain Lipase, GDXG, active site; (InterPro:IPR002168) Range:  from: 9629090    to: 9631213    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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