Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                --------->AtMYB61                                                             <---------MYB52(2)        <---------At4g35610                    --------->WRKY38(1)      --------->ZAT6      <-----------RAV1(2)                      --------->WRKY12      <---------ATHB12    <---------AHL20(2)   ------->TEIL                    --------->ZAT6         --------->ZAT14     --------->TOE2(3) ---->AHL20(2)        <---------YAB1         --------->At4g35610 --------->MYB46(3)     --------->AHL20(2) -----AHL20(2)     --------->GLK1(2)         <---------At4g35610-------->P <---------ALFIN1         -   aaatgaactcagatgttttaaaatctgataaacttcaactctaatggagttgacttcaacttcactaaccaataacaccacctaaacttataaaattcag  9605300                                                            <-----------GT1                                                        --------->TOE2(3)                                                       --------->ANAC58                               <---------YAB1          ----------->GT1           --------->ANAC58                               <---------TOE2(3)       --------->ANAC58          --------->ANAC58                            <---------ATHB51           --------->ANAC46----------->GT1     --------->ANAC58              ----------->GT1<---------ICU4      ---------->DOF2      <---------TOE2(3)    --------->ANAC46            <---------LBD16 --------->ICU4     --------->TOE2(3)      <---------YAB1       --------->ANAC58      --------->YAB1    <-----------------AGL3--------->ANAC58        <---------TOE1(3)  --------->MYB52(1)     <---------YAB1     <-----------------AGL2<---------ANAC55(2)  <---------ATHB51--------->AHL20(2)   --------->YAB1   ---------->DOF2           --------->ANAC58   ------>MYB83 <---------ATHB12 -------->YAB1--------->LBD16-------->HAHB4   ----------->GT1    ------>MYB46(1) ----------->GT1   aaaaataatcataaaccggaaacaaagctaattatggatggaagagaaacgtaaaccacgttaaaccaaattatggtttaatcaagaaaataaacgaaac  9605400                                                                  <-----------GT1                                      --------->YAB1           <---------bZIP60(1)                                     <---------ATHB12          <---------GLK1(1)                                    ------>MYB83               --------->GLK1(1)                <---------TOE1(3)   ------>MYB46(1)            --------->bZIP60(1)      <----------DOF2                <---------TOE2(3)------------>CBF   <------------CBF         ------->GAMYB                <---------YAB1 <-----------GT1      <---------GLK1(2)     --------->MYB52(1)   aaaatcaagagaaaaattaagattacatcgaataaaccaatcgaaatttacaaagattgtttctgatatcacttcataaccgaatataaactttaagaga  9605500                 --------->DAG2                ---------->DOF2          --------->LBD16                                            <---------TOE2(3)          ----------->GT1                ------>MYB46(1)   ----------->GT1      --------->YAB1        <---------LBD16               --------->DEAR3(2)   --------->LBD16      <---------ICU4     ---------->DOF2            <-----------ARR10        <---------LBD16       --------->ICU4  ------  --------->TOE2(3)          ------->GAMYB   ---------->DOF2    --------->GLK1(2)        <-----------HVH21  --------->TOE1(3)       <-----------GT1------>MYB83  <-----------GT1       --------->YAB1    <-----   taaaccataaaccggaaataaagctatttaaccgaatcaaaccgacttaaatcgatttaaccggataatctaaggtctaaaataatgagactgtcactga  9605600                       <---------LBD16                       <---------ANAC46                  <---------MYB46(3)        <-------TEIL<---------RAP2.6(2)           --------->ICU4       --------->ARR14(1)                         <---------ATHB12       --------->CCA1(2)  <------NtERF2       ------------>CBF                ------->GAMYB      --------->ARR11(1) ----------->GT1     --------->ANAC58                <---------ALFIN1      <---------ARR14(2) <------NtERF2       --------->ANAC58              ----------->RAV1(1)      <      --------->ARR14(2) --------->LBD16<------ZmHOX2a(1)         <---------ALFIN1                  < --->ZAT14        --------->ALFIN1 --------->HSFB2a(2)           ------>ZmHOX2a(1)        ------>ZmHOX2a(1) ----ZAT14       --------->ALFIN1  <---------HSFB2a(2) ----------->GT1    --------->MYB46(3)     <---   agtttgtagatacggcgaggttgtggccggagaaattcgagaggaagaagcaatgaagagtgacttcctcacttcaacaacacacttcaatccttcaata  9605700                                ------>ZmHOX2a(2)                               <------ZmHOX2a(2)                               --------->GLK1(1)                                                    -                              <---------AGP1                                                        -                              <---------ARR14(2)                                <-----------HVH21  <-                              --------->ARR11(3)                             --------->LBD16  -------                              <---------ARR11(3)                       ----------->HVH21      -------                             <------ZmHOX2a(1)                         <---------ETT(1)   -----------                    <---------GLK1(2)                                 --------->MYB46(3) ----------->HVH21                  --------->ANAC58                                ----------->HVH21      --------->DEAR3(1) ---------ANAC58  --------->ANAC58     --------->DAG2             <---------ETT(1)    ---------->CDC5 ---------ANAC58  --------->ANAC46    ---------->DOF2       ---------->DOF2 <---------O2--------->At4g35610 --------GT1  --------->ANAC46--------->ARR14(2)      <<<<<<<<<TBF1   --------->DEAR3(2)<---------At4g35610   ttccttcccaaaataccctcaagaaactctaggatctcaataaagtcatcatcttcttcttccaaagtccgacccgacccgtggtcactcagcgacggta  9605800         --------->AtMYB61        --------->HSFB2a(1) --------->LBD16                  --------->HSFC1(2) -------->LBD16      <-------TEIL <---------HSFC1(2) -------->ANAC46    --------->CCA1(2)               <---------DEAR3(1) --------LBD16     --------->ARR14(2)               --------->DEAR3(1)       ---------->DOF2 -->At5g28300      <---------ARR14(2)          --------->At4g35610    ---------->DOF2           ----- -->DOF5.7(2)      --------->ARR11(1)       <---------YAB1         --------->YAB1               ----- ->AtMYB77       ----------->ARR10<---------HSFB2a(1)------>NtERF2<---------ATHB12      <---------ANAC55(2)   acccggaaaaaccaaaaccgagatacgagagaccgaagcatccattatcagacgacgacgctcgacgaatcataaagaagaaagcacaatacttaagcac  9605900                                                                                                -----                                                      --------->LBD16                ------>ZmHOX2a(2)                          <---------ATHB12       --------->GLK1(1)                --------->ATHB12                     --------->ANAC58          <---------ZAT18                   <---------YAB1 <----         --------->MYB46(3)                    --------->ZAT18                 <---------At4g35610 ---->ANAC58         --------->ANAC46      --------->DAG2              <---------ARR14(2)     <------ ---->ANAC58         --------->ANAC58     ---------->DOF2              --------->ARR14(2)   <--------   gttaagaaggaaccaaggctcacaagcaatgactcccaaatggataaagcgaactccagagcaaatggttcagtatttggaagatgatcggaatggtcag  9606000                     <------NtERF2                   <---------DEAR3(1)                   <---------ANAC46                  --------->ATERF1(1)                  <---------At4g35610                  --------->At4g35610                                  --------->CCA1(2)                  <------NtERF2                                     <---------YAB1             <---------AtMYB61                                    --------->YAB1            ------->MYC3         --------->At5g28300             --------->ICU4 ---->At4g35610  <---------MYB46(3)                              <---------ZAT6 -----At4g35610 <---------RAP2.6(2)         <-----------HVH21 XXXXXXXXXXXXXXXXXXXX>MIR823    <------- -----RAV1(2)--------->ALFIN1    <-----------HVH21         --------->ANAC58          --------->ICU4 ---HVH21   <-------MYC3       <---------DEAR3(1)          --------->ANAC58          <---------YAB1   atgtatgggaaacatgtggtggctgcgattaagacggtgagaggtttgtcacagagaagacaaggtagtgatgatatgagatttgtgatgagtagctttg  9606100                                                          --------->ANAC58                                                          --------->ANAC58                                                     <----------ARF1                                   ---------->DOF2   <----------ID1                          <-------GAMYB            <------MYB83                   --------->CCA1(2)               <------MYB46(1)                               <---                  --------->ARR11(3)             <--------P         <----------DOF2            ------ ---DOF2          <---------ARR11(3)           <---------MYB46(3)   <---------DAG2        <---------TOE1(2)   tagcgaagttgagttttagagatatgtgtgttgttttgaaagaacagagaggttggagacaagttagagactttttctcttggatgaaattgcaggtttg  9606200  Previous    Next  AGI:  At5g27270.1    Description:  EMB976 (EMBRYO DEFECTIVE 976). similar to PGR3 (PROTON GRADIENT REGULATION 3) [Arabidopsis thaliana] (TAIR:AT4G31850.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO62191.1); similar to pentatricopeptide (PPR) repeat-containing protein-like [Oryza sativa (japonica cultivar-group)] (GB:BAD67773.1); similar to hypothetical protein OsI_020606 [Oryza sativa (indica cultivar-group)] (GB:EAY99373.1); contains InterPro domain Pentatricopeptide repeat (InterPro:IPR002885) Range:  from: 9605653    to: 9609790    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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