Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                 --------->ZAT6                          --------->LBD16                              --------->DAG2      <---------ICU4     <---------HSFB2a(2)               --------->TOE2(3)                      ---      --------->YAB1     --------->HSFB2a(2)               <---------DAG2                   --------- <-------TEIL         ------>MYB46(1)                  ------>ZmHOX2a(1)      --------------->AGL15 --HSFB2a(2)          <---------ARR14(2)              <---------MYB59 ---------->DOF2     <---------- ->HSFB2a(2)          ------>MYB83         <---------YAB1  --------->TOE1(3)  <---------------AGL15   acattcattcattactcaataacctatccagaaacactaaatactatgatttcattcctaaccttatgaccaaaaagtttctaatttgagtttcacagaa  9573700                                                        --------->GLK1(2)                                                        --------->ARR11(3)                         <-                                ---------->DOF2         <---------ARR11(3)                        ---                               --------->YAB1          --------->RVE1(1)                      -------                            --------->WOX13(1)         --------->CCA1(1)               --------->AHL20(2)                        --------->WOX13(1)           --------->AHL20(2)            <---------RVE1(1)                       <---------ICU4       <----------DOF2                   ----------->GT1 <------                      <---------YAB1       ------>ZmHOX2a(2)             ---------->DOF2    <-------- ------>TOE1(2)     --------->YAB1       --------->ARR11(3)             --------->YAB1 <---------AHL20(2) >ANAC46    --------->AHL20(2)<---------ATHB12 --------->TOE2(3)       <---------ATHB12--------->AHL20(1) -GT1   <---------ZAT6<---------ATHB12   <---------ARR11(3)          --------->WOX13(1)<---------AHL20(1)   cctagaaatagtcttaaaatactcatcattcaatcaaagttttgatctttcttaaaaaaatctttgtaattcaatcaaagttgtgatattttattaacaa  9573800                                                              <---------ICU4                                                              --------->YAB1                                                             --------->ICU4                                                             <---------ATHB12                                                           --------->WOX13(1)   <---------ARR14(2)                                                   <---------YAB1          ------>ZmHOX2a(2)              ------>MYB46(1)                    --------->YAB1 <---------YAB1  --------->ARR14(2)              ------>MYB83                       --------------->AGL15    --------->GLK1(1)              --------->ANAC46                   <---------------AGL15    <---------GLK1(1)        <---------At4g35610  --------->At4g35610 --------->TOE2(3)        <------ZmHOX2a(2)   --------->ETT(2)          <---------At4g35610 --------->TOE1(3)       --------->ARR11(3)   <---------ETT(2)         --------->ANAC58    ----------------->AGL2   <---------ARR14(2) --------LBD16--------->ANAC58          ---------->DOF2 --------->ANAC46 <---------ARR14(3) -------->RAV1(2)  --------->ATHB12 --------->ANAC58    --------->ANAC58 --------->ARR14(3) -->MYB46(3)  --------->AtLEC2      --------->ANAC46    --------->ANAC58 <---------ARR11(3) ---MYB52(2)  --------->ANAC58      --------->ANAC58--------->YAB1 --------->CCA1(2) ---GT1 --------->At4g35610 --------->ANAC58    ----------------->AGL3   --------->ARR14(2)       <--   acctggagacagcaccaagcaagattgagcaagctaacaagccaaagacaaccataataagcaatcatgatataagatctccgattcgagagtttagaca  9573900                                                       --------->ARR14(2)                                               --------->LBD16                                              --------->ANAC58                           <----------ID1     --------->RAP2.6(2)                 <---------At4g35610          --------->ANAC58               --------->ANAC46                 --------->At4g35610          --------->RAP2.3(2)       --------->GLK1(2)                --------->ANAC58              --------->ANAC46   <---------ANAC55(2) -------GLK1(2) --------->ANAC58             --------->RAP2.3(1) --------->ANAC55(2)              <--   gactcttcttcgcttcgtaagctaagtaagcgacgaagaagagagaagccgcaacgagaaccgtgttatgtaagaatccatggcacttatcgacccatct  9574000                                                                      --------->ANAC58   --------->ANAC55(2)                             --------->At5g28300                      --------->ANAC58   <---------ANAC55(2)    <---------MYB52(1)      ----------->GT1                    --------->HSFB2a(2)  <---------MYB46(3)  --------->ATHB12 <---------TOE2(3)       ----------->GT1     <---------HSFB2a(2) <---------ATHB12-- -------CCA1(2)    <---------TOE1(3)--------->YAB1         <---------ANAC46    <---------YAB1   -----   atatccattggctgtcgaattagggtttagcggtgaaatcagaaatggtgactctgcaatttcgtcgagaactcgcatttcatcaatggttacgaatcag  9574100                                                     <------MYB46(1)                                                     <------MYB83                                               <---------AHL20(1)                                               --------->AHL20(1)                                               --------->AHL20(2)         <------------CBF                                               <---------AHL20(2)       <---------ATHB12                                              --------->AHL20(2)  --------->ARR14(2)                         --------->ARR14(2) ------>MYB83          <---------ARR14(2)     ----------->GT1    --------->AGP1       <---------ARR14(2) ------>MYB46(1)      ------>MYB83 <---------TOE2(3) ------->MYB52(1)  <------ZmHOX2a(1)      --------->TOE2(3)      ------>MYB46(1)       --------->ICU4 ---->At4g35610  --------->ALFIN1     *TSS<---------MYB59      <---------MYB59<---------TOE1(3)   ataacagagctagagcaaggaggagcgaaactggattttggaaacctaataaatttggtttctgaccaaatccaaacattgaggttgaaattagtaaata  9574200                                                                             -------->ATHB1                                                                             <---------AHL20(2)                                                                             -------->HAHB4                                                                             --------->ATHB51                                                                             <---------ICU4                                                                             --------->ATHB12                                                                            <---------ATHB51                                                                            <---------ATHB12                         <---------AHL20(2)                                 --------->ICU4                  ----------->GT1                                   <---------MYB52(2)              -                 <---------TOE2(3)                               --------->MYB46(3)         <--------             --------->TOE2(3)    <------ZmHOX2a(1)        <---------HSFB2a(2)          <xxxxxxxxxxxx       --------------->AtSPL8 --------->TOE1(2)            --------->HSFB2a(2)          ---------->DOF2 --------->ARR11(3)      --------->AHL20(2)                --------->LBD16  <---------YAB1  ---------   taagatagttttggaccttaatgtaaattaaacgaaggacctcttcttctcaacagttttccgagaaaccactaactaattattgtcttaaaaagaccct  9574300                                                                         <---------AHL20(2)                                                                         --------->ARR11(3)                                                                    --------->AHL20(2)                                                                    <---------AHL20(2)                                                                 <---------AHL20(2)<---------MYB46(3)                                                                 --------->AHL20(2)<---------DEAR3(2)                                                              ----------->GT1     <---------DREB2C(2)                                                              --------->YAB1      <---------DEAR3(1)                                                    <---------AHL20(2)   <---------ARR11(3)                                                    --------->AHL20(2)   --------->AHL20(2)                                                   --------->AHL20(2)--------->AHL20(2)                                                --------->AHL20(2)<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                                       <---------YAB1        <---------YAB1    <-----------RAV1(1)     --------->AHL20(2)              --------->AHL20(2)   --------->ICU4 --------->AHL20(1) -------->MYB46(3)                   <---------AHL20(2) <---------ICU4--------->AHL20(2) -ARR11(3)       <---------At5g28300--------->AHL20(2)  <---------AHL20(2)  <---------AHL20(2) xxxxxxxxxxxsmallRNA(le3)           <---------AHL20(2) --------->AHL20(2)<---------AHL20(1)     >>>>> >ARR11(3)      <-----------GT1  --------->AHL20(2)<---------AHL20(2)<---------AHL20(2)--------------   caaccacttaaattgaaattacagtagaaactctataaattaatattcgataaattaataaatatgataaattaatatattatgtcggttccaattcgga  9574400                                                                                              <------                                                                                              -------                                                                                              -------                                                                                              <------                                                                                              -------                                                                                              <------                                        <---------AHL20(2)                                   <-------                                        <--------ATHB1                                       <-------                                        <---------ICU4                                   --------->AHL20(2)                                        --------->AHL20(2)                               <---------AHL20(2)                                        --------->YAB1                                --------->AHL20(2)                                        <---------AHL20(1)                         --------->YAB1<---                                       --------->ICU4                             <---------YAB1-----             ----------------->AGL1    <---------YAB1                            <---------ARR11(3)           >>>>>>>>>>WRKY38          --------->YAB1                              --------->ARR11(3)           >>>>>>>>>>WRKY26        --------->ARR11(3)                      ----------->GT1--------->AHL20(2)      --------->ICU4               <---------ARR11(3)    xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(s2)-------- ----------->GT1                 <---------TOE2(3)     xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3) -------- >>>>>>>>>>>>LFY           --------->ARR11(3)         xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(s2)<---------AHL20(2) --->AGL1  >>>>>>>>>>WRKY43<---------ARR11(3)      <---------GLK1(1) <---------------AtSPL8--------->YAB1   ccaatgtaaaaattgaccaaaatcgataagataataagataataattttcttgaaatctctatgtcaaaatatggtccagtaatatcataaattaataat  9574500    --------->TOE2(3)    --------->YAB1    --------->TOE1(3) --HAHB4 -->ATHB51 -->YAB1 --ATHB1 ->HAHB4 ---ICU4 --ATHB51 --YAB1                                                        --------->TOE2(3) --------GT1                    --------->YAB1           ---------->ID1                            -- ---->ICU4            --------->YAB1               <---------YAB1                                  <- ->AHL20(2)    <----------DOF2----------->GT1   <---------MYB52(1)              <----------DOF2    <- ->ICU4   --------->YAB1  --------->GLK1(2)<----------DOF2 <----------DOF2 ------->TEIL <-------TEIL<   tactaatcttaaacatacttttaaaaataatctagtataatatgactttcgttatatttgtcttttcttaaaatttgaatctctttgaagttcatctcta  9574600  Previous    Next  AGI:  At5g27210.1    Description:  similar to transmembrane protein, putative [Arabidopsis thaliana] (TAIR:AT3G05010.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO15118.1) Range:  from: 9572103    to: 9574138    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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