Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                            ----------->GT1                                                        =====================HOX2a_HOX2a                                                     --------->HSFB2a(2)                                               ------>ZmHOX2a(2)                                              ====================================HOX2a_HOX2a                                              =================HOX2a_HOX2a                                              <------ZmHOX2a(2)                                             --------->GLK1(2)                                             --------->ARR11(3)                                             <-----------ARR10                                             <---------AGP1           ------>ZmHOX2a(2)         -----                                             <---------ARR11(3)       ==============================HOX2a_HOX2a                                             <---------ARR14(2)     <---------ARR11(3)          <----                                   --------->HSFB2a(2)  <------ZmHOX2a(1)                       XXXXX                                  <---------LBD16    <---------HSFB2a(2)           <---------ANAC46<-                               <---------ANAC58===================================HOX2a_HOX2a <------                           <----------DOF2   --------->ARR14(2)     --------->ARR11(3) <-----------GT1             <----------DOF2   <---------ANAC58================HOX2a_HOX2a ------>ZmHOX2a(1) ------>ZmHOX2a(1)   taactctgtttctagctttgagcaatcgactttacttggggaacaaggatctggtctaggaagtaactctgatcttcctcccatggtgtttactcctcag  9532600                    <---------ZAT18                   ---------->ID1               --------->O2                                               --------->YAB1               ====================bZIP_DOF                              <---------ATHB12          --------->ANAC58                                          <------ZmHOX2a(2)        --------          --------->ANAC58                                         <---------ARR11(3)       <------MYB46(1)          --------->ANAC46                                         <---------ARR14(2)       <------MYB83 ---->At4g35610<---------O2                                        --------->ARR14(2)      --------->MYB59 -----At4g35610--------->TGA1a                    --------->ANAC58 --------->AGP1   --------->YAB1 XXXXXXXXXXXXXXX>MIR403 <----------DOF2           --------->ANAC58--------->At4g35610  --------->YAB1 ------TEIL    <---------TGA1a        ------>NtERF2--------->MYB46(3)    --------->ICU4<---------ICU4 -----RAV1(2)<---------ALFIN1        --------->ANAC46             <---------At4g35610 <---------YAB1   atgcagacacaaaccccacttgtcccctttgatcagtttgcgccatggaatcaagcaccatcgtttgcagatccaatgatgttctcttataattaggtct  9532700                      <---------ANAC58                      <---------ANAC58                 <----------DOF2          <------ZmHOX2a(2)         --------->AGP1         <---------AGP1         <-----------ARR10         --------->ARR14(3)                                      <---------TOE1(3)         <---------ARR14(2)                           <---------GLK1(2)         --------->ARR14(2)  <---------DOF5.7(2)    <---------AHL20(1)         <---------ARR11(3) <---------WRKY45        --------->ARR11(3)       <---------AHL20(2)         <---------ARR14(3) <---------WRKY12      <---------AHL20(2)         --------->AHL20(2)         --------->ARR11(3)--------->WRKY18(1)   --------->AHL20(2)    <---------YAB1      <XXXXXXXXXXXXXXXXXXXXMIR866-5P  <---------MYB52(1)         <---------TOE2(3) ->ARR11(3)------>ZmHOX2a(2)<---------WRKY38(1)  --------->YAB1  --------->MYB59   tgttgttccaagatctgttctttgacttggtcaacgttctgttattttctattatatattctcagtttaggttatgagtttaatttgtatgttttctaag  9532800                                                                                                   <-                                                                                                  ---                                                                                                 <---                                                                                                 <---                                                                                                <----                                                                                                -----                                                                                                <----                                                                                                -----                                                                                                -----                                                                                                <----                <-----------GT1                                                                 -----              <---------AHL20(2)        <---------ANAC58                               <----------DOF2      ------->TEIL                      <---------ANAC58                               <-------------   <---------YAB1             ---------->DOF2                                          <---------DAG2   tatgtatgaatgctattttttcaagttttaaaaaaagtcttggcttcttctatatttgtatgagtctacaatttgagtttgaaaacctgctttattaaga  9532900       ------------>CBF ---------DOF2 --->ZmHOX2a(2) ------RVE1(1) ---ZmHOX2a(2) -----ARR14(3) ---->ARR11(3) -----ARR14(2)                                         --------->ANAC58 ---->ARR14(2)                                       ---------->DOF2                        --------- ---->ARR14(3)                       <-------TEIL   --------->ARR14(2)        <---------ANAC58 -----ARR11(3)                       ------->TEIL   <---------ARR14(2)        <---------ANAC58------>ZmHOX2a(2) ---->AGP1                ------->TEIL      <---------AHL20(2)  <------------CBF     *TSS   <-------- --AGL15        <------------CBF --------------->AtSPL8--------->ANAC58 <------------CBF  -----------   tctttaatatacaatagacattgaaatgaatgctagatgtacataatttatgcagataagccaactaattgagtaattgagcttgtctcggtgtgatctt  9533000                                                           <---------At4g35610                                                           --------->ZAT2                                             --------->ANAC58                   --------->AHL20(2)        --------->ANAC58   <---------ETT(1)  <---------AHL20(2)               <---------YAB1          <---------ZAT2  --------->AHL20(2)<---------AHL20(2)   <------ZmHOX2a(1) --------->At4g35610    ---------->DOF2 >ARR11(3)        <----------DOF2 --------->ARR11(3)    <---------ZAT14      <---------bZIP60(1) -ARR11(3)   ------->TEIL         <---------ARR11(3) <---------At5g28300     --------->bZIP60(1) >ARR10 <-----------GT1         ----------->GT1     <-----------GT1  ---------->DOF2     <---------ZAT6   cagtttaattttacgaatcgatttaatggaagagaagataataggataagcaaattactgcagcttccgacaaaagatgatgtcaaaagtagtgttttgt  9533100                                                                                      <----------DOF2                                                                                   <---------ARR11(3)                                                                                   --------->ARR11(3)                                                  --------->LBD16                 <------MYB83                   <---------ANAC58              <---------HSFB2a(2)         <---------YAB1         <                   <---------ANAC58              --------->HSFB2a(2)       <---------At4g35610  -----      ----------->GT1                       ------->TEIL       --------------------->WRI1  <---------GLK1(2)     --------->ALFIN1 <---------ANAC46   <---------ATHB12     --------->TOE2(3)   <------MYB46(1)   <   ccaagaggtggagaaactctggcttcgttgaatttagattccaatgaatttccagattacaatgccttagtgagttttgctgataggtctttagattcct  9533200                                                                                <---------MYB46(3)                                                                            --------->ALFIN1                                                                           <-------MYC2                                                                           <-------PIF5                                                                           ------->PIF5                                                                           ------->MYC2                                                                           ------->MYC3                                                                           <-------MYC3                                                                          <---------O2                                                                          --------->O2<---------GLK1(2)          <---------ANAC58            --------->LBD16                     <---------ANAC55(2)          <---------ANAC46           <---------HSFB2a(2)                  <---------ANAC46          <---------ANAC58          <---------LBD16                       <---------bZIP60(2)        <---------YAB1         --------->ALFIN1                           --------->ANAC55(2)     <-------TEIL           <XXXXXXXXXXXXXXXXXXXXMIR2111B*                --------->TGA1a  <------ZmHOX2a(1)         --------->DAG2        <---------KAN4(2)       <---------TGA1a ---------TOE1(3)          ---------->DOF2     <---------TOE2(3)      <-----------HVH21--------->GLK1(2) ->ZmHOX2a(1)         <-----------RAV1(2) <------ZmHOX2a(1)     <-----------HVH21   ----------->ARR10 ---------TOE2(3)  --------->ZAT2 <---------ARR14(2)         <---------ANAC46  <---------ANAC46   ctaaggattcatgcttgtacaagctcaggtaaagtgtgtccggaggattgagaatgaacagttttgtgtcagtgtcacgtggtggatagattctgtagtt  9533300                                  ----------->HVH21                                                --                            ------->TEIL                                                       ------             --------->ARR11(3) <---------ANAC55(2)                                          --------    <---------DOF5.7(2)  --------->ANAC55(2)                                                 <-------  --------->DOF5.7(2)    <---------ANAC46                                --------->AHL20(2)  <------- --------->TOE2(3)       <---------ANAC55(2)        ---------->DOF2    <----------DOF2     <---------   aagcgttaacttaagcatcttgatgctacgtatcatgtgaagcgttagagttttaaaagtgattccactaagtctttatatatgttagacattggtgtac  9533400                              <---------ANAC58                      --------->ANAC55(2) -------->DOF2        <---------ANAC58                                                        <------ ->TEIL               <---------ANAC55(1)                                                   --------- ->ZAT18              <---------ANAC58         <---------DAG2                              <---------ATHB12 --ZAT14              <---------ANAC46      <-----------GT1                          --------->ANAC58 --ZAT18  <-----------RAV1(2) <---------ANAC58 --------->TOE2(3)                     --------->ANAC58 ------AtSPL8         <---------ANAC55(2) <----------DOF2   <-------TEIL             --------->ANAC46   ttaaagactccatcaggttttgatgcgtgatttcgagtcagtttctttaccttatgtctaagttcatgtgtttagaacagaatgtataagccaatggtga  9533500  Previous    Next  AGI:  At5g27095.1    Description:  pseudogene, hypothetical protein Range:  from: 9532985    to: 9533652    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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