Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                --------->ARR11(3)                                                              <---------ARR14(2)                    ===================================HOX2a_HOX2a         --------->ARR14(2)                    <------ZmHOX2a(2)                         <-----------ARR10                    <---------ATHB12                          <---------ARR11(3)           --------->TOE2(3)            <---------ICU4                                    --------->ARR14(3)           --------->TOE1(3)            --------->YAB1                       <---------ICU4            --------->GLK1(2)           <---------YAB1                       ------>ZmHOX2a(1) <---------YAB1         ------->TEIL         --------->YAB1                        <---------MYB59--------->GLK1(2)          -------->P        <---------YAB1                    --------->At4g35610 <---------ARR14(3)    --------->YAB1   --------->At4g35610                    <---------At4g35610 --------->ARR14(2)   <---------YAB1   <---------At4g35610            <---------ARR11(3)   ---------->DOF2     <---------ARR14(2)   aagacagcttataatcataccgatcaagagcctcgagatacttctgcttcctaatttcaaagaaaatcttcatagagtatctgttatcatcaaccttagt  9515000            --------->ANAC55(2)              <----------DOF2            <---------ANAC55(2)             <---------HSFC1(2)            --------->ANAC46                --------->HSFB2a(1)                               -------           <-------TEIL                     --------->HSFC1(2)                   ------>ZmHOX2a(1)         <---------ARR14(2)                 <---------HSFB2a(1)                ----------->RAV1(2)         --------->ARR14(2)               <---------ARR11(3)                 <---------ARR14(2)     <<<<<<<GRF7                          <<<<<<<ZML2                        --------->ARR14(2)   ----------->HVH21                 <---------ZAT2                          --------->GLK1(2)------- ----------->RAV1(2)                 --------->ZAT2  --------->YAB1      >>>>>>>>>TBF1 <----------DOF2   aaaacctgacaaatacgtctcaacatcatcccattctccagctagaactttctcatcaaaatacttggtattgaagaagaatcctgactctttctcaagc  9515100                                                                                                  ---                                                                                                 ----                                                                                       --------->ZAT14                                                                                       <---------ZAT18                                                                                       <---------ZAT14                        --------->WOX13(1)                                             --------->ZAT18                      --------->WRKY18(1)               --------->ANAC46          ----------->RAV1(2)     <-----------GT1--------->WOX13(1)              ----------->RAV1(1)          -------->P      ---- -->ANAC58        <---------ATHB12                 --------->ANAC46   --------->AHL20(2)      ------- -->ANAC58  <-----------GT1                   --------->ANAC46        <---------AHL20(2)     <-------   ctatatttaacaaattacaaatcagtcaatcccaaaattcagcctctcacaacacaacacaaaacaaaccatataaatagactaacctgtgcacagattc  9515200                                                                                  ----------->HVH21                                                                                  ----------->TGA1                                                       ------->GAMYB           <---------ARR14(2)                                         -------->P --------->MYB52(1)         --------->ARR14(2) --->ZmHOX2a(1)                          ------>MYB83 --------->MYB46(3)      <---------CCA1(2) ----->TOE2(3)  --------->LBD16          ------>MYB46(1)                --------->GLK1(2) ----->TOE1(3) --------->HSFB2a(2)     --------->MYB46(3)               ------->TEIL -->GLK1(2)    <---------HSFB2a(2)     --------->AtMYB61  ------>NtERF2<---------ARR14(1) --GLK1(2)   ------>ZmHOX2a(1)--------->YAB1     --------->ANAC46      <---------GLK1(2)   cttaaatttctcttcctccagaaattgaagtatcagaaacaccaactctcgactcaacgacgacattctcaacgaatctcaaatctgacgagaaacgaag  9515300                      --------->GLK1(2)                      <---------ARR14(2)                      ------->TEIL                   --------->ANAC58                                    --------->GLK1(1)                   --------->ANAC46                                    <---------GLK1(1)               --------->CCA1(2)                                      <---------ARR14(2)            --------->ANAC58                                         <------ZmHOX2a(1)            <--------------OsCBT                                  <---------HSFB2a(2)            --------->ANAC58<---------ZAT2                 <---------YAB1                          *TSS          ---------->DOF2   --------->ZAT2         ---------->DOF2--------->HSFB2a(2)            <---     <----------ID1--------->ANAC58   --------->CCA1(2) --------->GLK1(2)               <---------ARR11(3)   --------->CCA1(2)  --------->ARR14(2)      <-----------RAV1(2)<---------ANAC46       --------->ARR11(3)   aagagagacgacgaaagaaacacgaatccgagctctgaagacacgagcccaggtaaagactctgatttcgaggatttctagggttttgaagagctctagc  9515400                                            <------ZmHOX2a(1)                                         <------ZmHOX2a(1)<------------CBF                                  ---------->DOF2 --------->ARR14(2)                                 <---------AHL20(2) --------->ALFIN1                               ----------->TBP    <---------ARR14(2)               <---------ANAC46                              <---------ARR11(3)  <------------CBF                 <---------ANAC58                              --------->AHL20(1) --------->ATHB12                  <---------ANAC58 -------DOF2                --------->GLK1(2)   ----------->ARR10               <----------DOF2    <-   ttttagagaaaaatggagagagagagagagaatatataaagaaggaggagaagattgggggattgagaaactttagacctcgctttcttggacgcgttct  9515500                                                                                     <------MYB83                                                                                     <------MYB46(1)                                                                                     ----------->GT1                                                                                    --------->MYB46(2)                                                                                    --------->MYB59                                                     <---------DEAR3(2)            <--------P                                  --------->CCA1(2) <---------DEAR3(1)             <---------MYB55(1)                        ------>MYB83                <---------At1g77200<---------------AGL15    -----                        ------>MYB46(1)      <---------HSFB2a(1)       ------>ZmHOX2a(1)       ------                      ------->GAMYB    --------->At4g35610            --------->TOE2(3)        <----- ---------DOF2       --------->DEAR3(2)<---------LBD16    --------->ICU4  <---------YAB1  -----------   tctttgcacagagacatcgttctaccgacttatcagatataagcggagtcttcgtcggtgataagtaggcttccttataagagaggtaggttaagttatt  9515600                                                                                --------->ANAC58                                                                                --------->TGA1a                                                                                =====================                                                                                <---------TGA1a                                                                                --------->ANAC46                                                                           <---------ZAT18                                                                           --------->ZAT18                                                                           <---------ZAT14                                                                        <---------ANAC46                                                                     --------->GLK1(2)                                      <---------ARR14(2)            <---------ARR14(2)        <---------ZAT6                --------->ARR14(2)            --------->KAN4(2)       <---------WOX13(1)            <------NtERF2                 --------->KAN4(1)      <---------ANAC58             <---------ANAC46                <---------KAN4(1) ---->YAB1                         <---------ANAC58               <---------KAN4(2)          -------- --->ICU4                          <---------ANAC58          ----------->GT1    --------->ANAC58 ----YAB1        --------->ATHB12 <---------LBD16            <---------ANAC46 <---------ALFIN1  <---- >GT1 <---------ANAC58          --------->ALFIN1             <---------ZAT6--------->ZAT14  ---------   atcaaattgagtgataagttgatttggagatagagtggcggattcgaaaacaaaattcaaatagtgtgaatattctgtgcacacgtccagtctggtcccc  9515700                                        --------->ZAT14                         <----------DOF2     <-----------GT1           <---------ZAT2                                 ---------->ID1   <-----------GT1             --------->At4g35610                   <---------YAB1 =======================bZIP_DOF <----------DOF2        <----------DOF2      <-----------GT1 ->PCF2                        <---------At4g35610     <---------ANAC58 ------>ZmHOX2a(1) -----ALFIN1        <-----------RAV1(1) <---------ZAT18<---------ANAC58 <----------DOF2     <-------- >PCF5       <----------DOF2   --------->ZAT2     <---------MYB52(1)<-----------GT1         <--------   acatttttctctctcctttattatgtcgctctcagctttcgatgcactcttcgtttggcttttctcatattatcctttttttctttttctcgcgatattt  9515800                                                                                        <---------AHL20(2)                                                                                     --------->YAB1                                                                                    <---------AHL20(2)                                                                             --------->TGA2(2)                                                                            <-----------TGA1                                                                            <-----------HVH21                                                                           --------->TGA2(1)                                                                           <---------bZIP60(1)                                                                           <---------TGA2(1)                                                                           --------->ANAC55(2)                                                                           <---------ANAC55(2)                                   ----------->HVH21                       <---------ANAC58                                 <---------ANAC58                          --------->bZIP60(1)                                 <---------ANAC58                          <---------ANAC58       <----------DOF2           --------->MYB52(2)                        --------->ANAC58    ------>ZmHOX2a(2)      <---------ANAC55(1)                             --------->ANAC58   --------->GLK1(1)       <---------ANAC55(2)                            <-----------STF1   <---------GLK1(1)       --------->ANAC55(2)                          --------->ARR14(2)   <------ZmHOX2a(2)     <---------AHL20(2)                          <---------TOE2(2)  --------->AHL20(2)  <---------ARR11(3) <---------AHL20(2)                       --------->ARR11(3)    --------->AHL20(2)  --------->ARR11(3) --------->AHL20(2)           <---------ETT(2)   <---------TOE1(2)  --------->YAB1 -RVE1(1)           --------->AHL20(2)            --------->ZAT18   <-----------RAV1(2)<---------YAB1 -CCA1(1)         <---------ARR11(3)      --------->YAB1      <---------ARR11(3)    <---------YAB1---   ttgagatctctttttcgcaagatttaattaagtgttcgtgacaattacaatgtggacaattcaacatctcgcaggttacgtcatatataattatatatac  9515900  Previous    Next  AGI:  At5g27030.1    Description:  TPR3 (TOPLESS-RELATED 3). similar to TPR1 (TOPLESS-RELATED 1) [Arabidopsis thaliana] (TAIR:AT1G80490.2); similar to TPR1 (TOPLESS-RELATED 1) [Arabidopsis thaliana] (TAIR:AT1G80490.1); similar to TPR2 (TOPLESS-RELATED 2) [Arabidopsis thaliana] (TAIR:AT3G16830.1); similar to Lissencephaly type-1-like homology motif; CTLH, C-terminal to LisH motif; Nitrous oxide reductase, N-terminal; WD40-like; Quinonprotein alcohol dehydrogenase-like [Medicago truncatula] (GB:ABD28351.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO17486.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN79774.1); contains InterPro domain WD40 repeat-li Range:  from: 9508721    to: 9515399    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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