Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100       <---------ARR11(3)                                           --------->ARR14(2)   <---------YAB1                                                 <---------ARR14(2)         --------   --------->ICU4                                           <---------At4g35610              -------- ------NtERF2                                               --------->ZAT2         <------NtERF2 ---->NtERF2                    --------->TOE2(3)           <---------ZAT2       <---------RAP2.6(2) ------>ID1                   --------->GLK1(2)             --------->At4g35610 <---------LBD16 --->O2------>ZmHOX2a(2)     <---------GLK1(2)   --------->ARR14(2) ------>ZmHOX2a(2)    <---------YAB1 --->ANAC46         <---------GLK1(1)            <---------ARR14(2)<------ZmHOX2a(2)   --------->REM1(1)   tcgccatgatcgtcaaaatttgaaatccctagaatctcaatttcacatccaaattcgaaatcagctccgatctgaacacaatcgcggcttcatcatcgac  9490700                                                            <------ZmHOX2a(2)         --------->ZAT14                                          --------->ZAT18   ===========================HOX2a_HOX2a                                   --------->ANAC58        <---------ARR11(3)   <------ZmHOX2a(1)----                               ------>NtERF2          <------NtERF2<----------DOF2 ----------->GT1                              <---------ETT(1)      <---------DEAR3(1)    <---------At4g35610    ----                   --------->DAG2  --------->ANAC58--------->At4g35610 <-----------------AGL1   ----- ->ETT(2)  ------>MYB46(1)    ----------->HVH21    <---------At4g35610 <-----------------AG     <---- ->MYB46(3)------>MYB83   <---------GLK1(1)       --------->ALFIN1 <---------DAG2---------->DOF2<----   cgagaataaaaccgaacacaaaaattgggactccgacaaggaagtgctcggagagcggcgagatcaaaactttttccgatgaggaaagtaaactctcaga  9490800                                                                                                 ----                                                                                             <-------                                                                                       --------->At4g35610          *TSS                                                                         <---------At4g35610        <---------TOE1(3)                                                              <------NtERF2        <---------TOE2(3)                                           ----------->GT1  <---------DEAR3(1) ----->GLK1(1)        --------->ZAT6                               ----------->GT1  <---------LBD16 ----->CCA1(2)        <-----------GT1                             --------->DAG2    --------->LBD16 ---->ARR14(2)    <----------DOF2     --------->TOE2(3)          ---------->DOF2   <---------ANAC46 -----ARR14(2)    <---------DAG2 --------->ANAC46       --------->At5g28300        <---------ANAC58 -----GLK1(2)  <-----------GT1  --------->LBD16        ----------->GT1             <---------ANAC58 -   tttgcaaattgaggttttcacttttcactatttccccaaaacttaaaactttggaaacagtaaaaaaaaaagttaaaaaacagttgcgcggctaactttg  9490900                                           --------->TGA1a                                           <---------O2                                           --------->ANAC46                                           --------->O2                                           <---------TGA1a                                           <---------ANAC55(2)                                           --------->ANAC58                                           --------->bZIP60(2)                                      -                                           --------->ANAC58                                     -----                                           ===================================================bZIP_DOF                                           --------->ANAC55(1)      <---------ANAC58   ----------->GT1                  ------>MYB83             ==========================MYC_MYB           <----------ID1          --------->ZAT2       --------->YAB1                       <---------ANAC58  ----------->GT1          --------->At4g35610 <---------ATHB12                   ----------->TGA1<---------HSFB2a(2)<     <-----------GT1    --------->ANAC46   --------->ANAC55(2)   ----------->HVH21 ---------->DOF2<-- ------>ID1     <---------MYB59--------->AHL20(2)            ------->GAMYB      ----------------->AGL1 ---DOF2  <---------At4g35610 <---------ATHB51            --------->MYB52(1)    ----------------->AG- ----->ZmHOX2a(1) ------>MYB46(1)   <-----------GT1  <---------SPL7 <---------ANAC46 --------->DAG2<-   tcctgtttcaccagcttaccaaatacaaaccaataatatttcgacacgtaagcgtcgtactaacagcatgacgttttgatattccaaaagggaaaaacac  9491000                                    <---------MYB46(3)        ----------->GT1        <---------ANAC58 <------NtERF2             <---------ANAC58 ----------->GT1           <---------ANAC58  ------------>CBF ----->NtERF2        --------->ANAC58<-------GAMYB--------->AHL20(2) ---->ANAC46    --------->ANAC58    ----------->GT1<---------AHL20(2) ---------MYB46(3)   --------->ANAC58----------->GT1 -------LBD16 <-----------GT1  <---------ANAC58   <---------AHL20(2) -------->LBD16 --------->ANAC58 ------>NtERF2    <---------AHL20(1)       *TSS      <----------DOF2 --------ANAC46 --------->ANAC46--------->ZAT18   --------->AHL20(1)    <---------CCA1(2)   ggcgggtaaaaggtttaaacggcatgcattcgtgcgggctgttaaaaaacaatttaatacatgtaatagaactcatctcttctatgtctttcactctctc  9491100                                    ---------->DOF2                                --------->YAB1                          --------->ANAC58                                --------->AHL20(2)          --------->LBD16                             --------->YAB1                <---------HSFB2a(2)                            <---------YAB1             --------->GLK1(1)--------->ANAC58                          --------->TOE1(3)      <----------ID1         --------->ANAC46<------NtERF2                          --------->TOE2(3)    ---------->DOF2     ---------->DOF2    <---------DEAR3(1)                   --------->AHL20(2)     ----------->GT1  --------->HSFB2a(2)       <------NtERF2 <-       <---------CCA1(2)  --------->YAB1 ----------->GT1   <---------HSFC1(1)      <---------DEAR3(1)   tctctctctatatccaaagaattaaaaaccataataaaaaaagaagataaaaagacgaattccagaaaaaaaagacgcaaaatcgtcgtcgtcgtcttcg  9491200                                                                                               <-----                                                                                           <---------AHL20(2)                                                                                           --------->AHL20(2)                                                                                          --------->AHL20(2)                                                                      <------ZmHOX2a(2)   <---------AHL20(1)               --------->GLK1(2)                                     --------->ARR11(3)   --------->AHL20(1)        <---------ANAC58                                             <---------ARR11(3)   <---------AHL20(2)        <---------ANAC58               <---------ARR11(3)   --------->LBD16    <---------GLK1(2)   <---------AtLEC2  <---------YAB1    --------->ARR11(3) <---------LBD16      <---------ARR14(2) ---------DOF2<---------GLK1(2)  --------->YAB1         <-----------GT1        --------->ARR14(2)   tctttgcatttcgtcggaatcttttgattcttgaatcggaatatctctgtttttgttttatccggactcaagatcaattcggattcttggaatttatttg  9491300                          <---------ARR14(2)                                <---------YAB1                          --------->ARR14(2)                               <---------GLK1(2)                    --------->DAG2               --------->YAB1          <---------YAB1            <---------MYB46(3)<----------DOF2   --------->ICU4       <---------GLK1(2)        -------   <-----------RAV1(1)    <---------GLK1(2)   --------->YAB1         <---------ARR14(2)       ------- ----AHL20(2)      ---------->DOF2         ----------->GT1           --------->ARR14(2)  ------>ZmHOX2a(2)   attttttgttgttgttgttgaaaaagtggattctttggtttcgatttgtaataatcttcgtagaaaaaatggattctgattcttggagtgatcgtctcgc  9491400                  --------->At4g35610                  --------->ZAT2                  <---------At4g35610             <---------GLK1(1)             --------->GLK1(1)                                                                    <--             --------->CCA1(2)        ------>ZmHOX2a(2)                                           <--      --------->HSFB2a(2)  <---------ANAC58                                                   -------      <---------HSFB2a(2)  <---------ANAC58                                    --------->YAB1<-------   <----------DOF2<---------ZAT2    <---------ARR14(2)    --------->YAB1       --------->TOE2(3)<---- -->ANAC58  <---------ARR11(3)      <---------AGP1     <---------ICU4       <----------DOF2--------->CCA1(2) -->ANAC58  --------->ARR11(3)      --------->ARR14(2)--------->ICU4     ---------->ID1 <---------TOE2(3)   atcggcttcaagaagatatcagctcgatttcttgtctcgatctggtgagtttgataaaaattataacttggatttgttctttcttaatttgagatttgat  9491500                  <---------ICU4     ---------->ID1 <---------YAB1 ----MYB83        --------->YAB1             --------->ARR11(3)                                 <---- ----MYB46(1)<---------AHL20(2)              <---------ARR11(3)                               <------ -->ATHB12   --------->AHL20(2)             --------->YAB1                               ------>ZmHOX2a(2) --YAB1  <---------AHL20(2)                <---------ATHB12                         <---------TOE2(3) -----WOX13(1)<---------AHL20(2)       <---------YAB1                 <----------DOF2  <---------ARR14(2)   tggttttgtcttaaatttaatcttgattctattgcaaaaatatcaatgatatttagacctcaaatttgttttcttttgaattgatcaaggatcgagattg  9491600  Previous    Next  AGI:  At5g26980.1    Description:  SYP41 (SYNTAXIN OF PLANTS 41); SNAP receptor. Identical to Syntaxin-41 (SYP41) [Arabidopsis Thaliana] (GB:O65359;GB:O04639); similar to SYP43 (syntaxin 43), SNAP receptor [Arabidopsis thaliana] (TAIR:AT3G05710.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO17470.1); contains InterPro domain Target SNARE coiled-coil region (InterPro:IPR000727); contains InterPro domain Syntaxin, N-terminal; (InterPro:IPR006011); contains InterPro domain Syntaxin/epimorphin, conserved site; (InterPro:IPR006012); contains InterPro domain t-SNARE; (InterPro:IPR010989) Range:  from: 9488151    to: 9490810    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g26990.1    Description:  drought-responsive family protein. Identical to Protein DEHYDRATION-INDUCED 19 homolog 6 (DI19-6) [Arabidopsis Thaliana] (GB:Q6NM26;GB:O04640); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G05700.1); similar to fiber protein Fb2 [Gossypium barbadense] (GB:AAN77145.1); contains InterPro domain Drought induced 19 (InterPro:IPR008598) Range:  from: 9491075    to: 9493923    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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