Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                       <---------ICU4      --------->YAB1                 <--------HAHB4     <---------ATHB12<---------YAB1  --------->YAB1--------->TOE2(3) <---------YAB1 --------->YAB1       --------->ATHB12 --->ZAT14     <---------YAB1       --------->ICU4 --------->TOE1(3) ----ZAT14    <-----------GT1       <---------ATHB12    <---------WOX13(1)         --------->YAB1 <-- --->ZAT18   --------->YAB1    <---------At4g35610--------->ZAT6      <-----------GT1 ---------->DOF2   actatcaatgatgtattatcattctcattgctaagctaatcatttccagttaaccctaattgatcaaattgttcaccattttcactgataaagagagaga  9490400                                                                                                    <                                                                                                    -                                                                                                    -                                                                                                   --                                                                                                   --                                                                                                  <--                                                                                                  <--                                                                                                  ---                                                                                                  ---                                                                                                  ---                                                                                                 ----                    ------>ZmHOX2a(2)                                                            ----                   =======================HOX2a_HOX2a                                            ----                   <---------HSFB2a(1)                                                           ----                   <---------GLK1(1)                                                             ----                   <------ZmHOX2a(2)                                                             ----                  <---------ARR14(3)                                                            -----                  --------->ARR14(3)                                                            <----                  --------->ARR11(3)                                                           ------                  --------->ARR14(2)                                                           ------                  <---------ARR14(2)                                                          ------>MYB46(1)                  <---------ARR11(3)                                                          ------>MYB83                  <-----------ARR10                                                          --------                 <------ZmHOX2a(1)                                                          ---------                 <---------GLK1(2)                                                         --------->DEAR3(2)               --------->LBD16                                                             --------->MYB46(3)              <---------HSFB2a(2)                                                     --------->At4g35610              <-----------RAV1(2)                                                     <---------LBD16              <---------LBD16                    --------->GLK1(2)                   --------->MYB52(1)              --------->HSFB2a(2)         ---------->DOF2                          <------ZmHOX2a(2)<           <---------ARR14(2)         <---------ANAC58                  --------->ANAC58  --------->SPL7     <---------HSFB2a(2)              <---------ANAC58       --------->MYB52(1)   <-----------HVH21<-     --------->HSFB2a(2)           <------ZmHOX2a(1)  <---------ARR14(2)--------->ANAC46<---------SPL7 -------------AtSPL8======================HOX2a_HOX2a --------->ARR14(2)--------->ANAC58--------->LBD16   agagtacctagaagttccaggatcttcggtactaataggagcgtaagagcgattcggattcaataacgaagtactcgccatctcgatcaccggaccaacg  9490500      ------>ZmHOX2a(2)     <------ZmHOX2a(2)    <---------ARR14(2)    --------->ARR14(2)  --------->LBD16 ---------LBD16 -------->RAP2.3(1) -------->ATERF1(1) ------->ABI4(1) ---->NtERF2 -------ATERF1(2) -------DEAR3(1) ------>RAP2.3(2) ------>RAP2.3(3)                                                                                ---- ------>DEAR3(1)                                                                               ------ ----->ATERF1(1)                                                                               ------ ----->ORA47(2)              <---------bZIP60(1)                                              ======= ----->DEAR4(2)              <---------ETT(2)                                         --------->SPL7< ----->RRTF1(1)              <----------ID1                                         --------->TOE1(2) ----->ERF1                  --------->bZIP60(1)                                    --------->TOE2(2) ----->RAP2.3(1)          ----------->TGA1                                          <---------SPL7 -- -->GAMYB               <---------At4g35610                                        <---------MYB52(2) -----ATERF1(1)      --------->YAB1                                               --------------->AtSPL3 --->DEAR3(1)       <---------ATHB12                                     ------>ZmHOX2a(1)    ------>ZmHOX2a(1) --->ANAC46      <---------WRKY12                                       --------->TOE2(3) --------->ARR14(2) ->MYB52(1)    <-----------HVH21           ----------->HVH21       ------->TEIL   --------------->AtSPL8 >AtMYB61      --------->LBD16             ----------->TGA1    --------------->AtSPL3 <---------TOE1(2) ------NtERF2 --------->ANAC46         <---------At4g35610     --------------->AtSPL8 <---------TOE2(2) --------ATERF1(1)--------->WOX13(1)   <---------GLK1(1)     --------->GLK1(2)    <---------------AtSPL3   ccgccggatcgtgttcccgtcaatgaagatgacgacaatggagctctgacgcttctcagagagtttctgtacttcctaaacagcaacgtacgattcctcg  9490600     <---------ARR11(3)   <---------YAB1                                                 --------->ARR14(2)   --------->ICU4                                                 <---------ARR14(2)         -------- ------>ID1                                                 --------->ZAT2                   -------- --->O2------>ZmHOX2a(2)                                    <---------ZAT2         <------NtERF2 --->ANAC46                     --------->TOE2(3)           --------->At4g35610  <---------RAP2.6(2) =============HOX2a_HOX2a     --------->GLK1(2)             <---------At4g35610 <---------LBD16 ------NtERF2                <---------GLK1(2)   --------->ARR14(2) ------>ZmHOX2a(2)    <---------YAB1 ---->NtERF2        <---------GLK1(1)            <---------ARR14(2)<------ZmHOX2a(2)   --------->REM1(1)   tcgccatgatcgtcaaaatttgaaatccctagaatctcaatttcacatccaaattcgaaatcagctccgatctgaacacaatcgcggcttcatcatcgac  9490700                                                            ===========================HOX2a_HOX2a                                          --------->ZAT18   <------ZmHOX2a(2)         --------->ZAT14                                   --------->ANAC58        <---------ARR11(3)   <------ZmHOX2a(1)----                               ------>NtERF2          <------NtERF2<---------DAG2---------->DOF2 ----                              <---------ETT(1)      <---------DEAR3(1)    <---------At4g35610   -----                   --------->DAG2  --------->ANAC58--------->At4g35610 <-----------------AGL1   <---- ->ETT(2)  ------>MYB46(1)    ----------->HVH21    <---------At4g35610 <-----------------AG     <---- ->MYB46(3)------>MYB83   <---------GLK1(1)       --------->ALFIN1 <----------DOF2 ----------->GT1   cgagaataaaaccgaacacaaaaattgggactccgacaaggaagtgctcggagagcggcgagatcaaaactttttccgatgaggaaagtaaactctcaga  9490800                                                                                                 ----                                                                                             <-------                                                                                       <---------At4g35610          *TSS                                                                         <------NtERF2        <---------TOE1(3)                                                              --------->At4g35610        <---------TOE2(3)                                           ----------->GT1  <---------DEAR3(1) ----->GLK1(1)        --------->ZAT6                               ----------->GT1  <---------LBD16 ----->CCA1(2)        <-----------GT1                             --------->DAG2    --------->LBD16 ---->ARR14(2)    <----------DOF2     --------->TOE2(3)          ---------->DOF2   <---------ANAC46 -----GLK1(2)     <---------DAG2 --------->ANAC46       --------->At5g28300        <---------ANAC58 -----ARR14(2) <-----------GT1  --------->LBD16        ----------->GT1             <---------ANAC58 -   tttgcaaattgaggttttcacttttcactatttccccaaaacttaaaactttggaaacagtaaaaaaaaaagttaaaaaacagttgcgcggctaactttg  9490900                                           <---------TGA1a                                           --------->bZIP60(2)                                           --------->TGA1a                                           --------->ANAC46                                           --------->ANAC58                                           <---------O2                                           --------->O2                                           --------->ANAC58                                         -                                           --------->ANAC55(1)                                  -----                                           ==========================MYC_MYB           ----------->GT1                                           ===================================================bZIP_DOF                  ------>MYB46(1)          <---------ANAC55(2)      <---------ANAC58   <----------ID1          <---------At4g35610       <-----------GT1                 <---------ANAC58  ----------->GT1          --------->ZAT2       --------->YAB1                    ----------->HVH21 ---------->DOF2<--     <-----------GT1    --------->ANAC46   --------->ANAC55(2)   ----------->TGA1<---------HSFB2a(2)- ------>ID1     <---------MYB59--------->AHL20(2)            ------->GAMYB      ----------------->AG< ---DOF2  --------->At4g35610 <---------ATHB12            --------->MYB52(1)    ----------------->AGL1 ----->ZmHOX2a(1) ------>MYB83<---------ATHB51       <---------SPL7 <---------ANAC46 --------->DAG2<-   tcctgtttcaccagcttaccaaatacaaaccaataatatttcgacacgtaagcgtcgtactaacagcatgacgttttgatattccaaaagggaaaaacac  9491000                                    ----------->GT1        ----------->GT1        <---------ANAC58 <------NtERF2             <---------ANAC58        <---------AHL20(2) ----------->GT1           <---------ANAC58  ------------>CBF ----->NtERF2        --------->ANAC58<-------GAMYB--------->AHL20(2) ---->ANAC46    --------->ANAC58    <---------MYB46(3) -------LBD16 <-----------GT1  <---------ANAC58   <---------AHL20(1) -------->LBD16 --------->ANAC58 ------>NtERF2    <---------AHL20(2) ---------MYB46(3)   --------->ANAC58----------->GT1                       *TSS      <----------DOF2 --------ANAC46 --------->ANAC46--------->ZAT18   --------->AHL20(1)    <---------CCA1(2)   ggcgggtaaaaggtttaaacggcatgcattcgtgcgggctgttaaaaaacaatttaatacatgtaatagaactcatctcttctatgtctttcactctctc  9491100                                    ---------->DOF2                                --------->AHL20(2)                      --------->ANAC46                                --------->YAB1              --------->LBD16                             --------->YAB1                <---------HSFB2a(2)                            <---------YAB1             --------->GLK1(1)--------->ANAC58                          --------->YAB1  ----------->GT1  <---------HSFC1(1)         <---------DEAR3(1)                          --------->TOE2(3)      <----------ID1         --------->ANAC58<------NtERF2                   --------->AHL20(2)    ----------->GT1   --------->HSFB2a(2)       <------NtERF2 <-       <---------CCA1(2)  --------->TOE1(3)    ---------->DOF2     ---------->DOF2 <---------DEAR3(1)   tctctctctatatccaaagaattaaaaaccataataaaaaaagaagataaaaagacgaattccagaaaaaaaagacgcaaaatcgtcgtcgtcgtcttcg  9491200                                                                                               <-----                                                                                           <---------AHL20(2)                                                                                           --------->AHL20(2)                                                                                          --------->AHL20(1)                                                                      <------ZmHOX2a(2)   --------->AHL20(2)               --------->GLK1(2)                                     --------->ARR11(3)   <---------AHL20(1)        <---------ANAC58                                             <---------ARR11(3)   <---------AHL20(2)        <---------ANAC58               <---------ARR11(3)   --------->LBD16    <---------GLK1(2)   <---------AtLEC2  <---------YAB1    --------->ARR11(3) <---------LBD16      --------->ARR14(2) ---------DOF2<---------GLK1(2)  --------->YAB1         <-----------GT1        <---------ARR14(2)   tctttgcatttcgtcggaatcttttgattcttgaatcggaatatctctgtttttgttttatccggactcaagatcaattcggattcttggaatttatttg  9491300  Previous    Next  AGI:  At5g26980.1    Description:  SYP41 (SYNTAXIN OF PLANTS 41); SNAP receptor. Identical to Syntaxin-41 (SYP41) [Arabidopsis Thaliana] (GB:O65359;GB:O04639); similar to SYP43 (syntaxin 43), SNAP receptor [Arabidopsis thaliana] (TAIR:AT3G05710.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO17470.1); contains InterPro domain Target SNARE coiled-coil region (InterPro:IPR000727); contains InterPro domain Syntaxin, N-terminal; (InterPro:IPR006011); contains InterPro domain Syntaxin/epimorphin, conserved site; (InterPro:IPR006012); contains InterPro domain t-SNARE; (InterPro:IPR010989) Range:  from: 9488151    to: 9490810    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g26990.1    Description:  drought-responsive family protein. Identical to Protein DEHYDRATION-INDUCED 19 homolog 6 (DI19-6) [Arabidopsis Thaliana] (GB:Q6NM26;GB:O04640); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G05700.1); similar to fiber protein Fb2 [Gossypium barbadense] (GB:AAN77145.1); contains InterPro domain Drought induced 19 (InterPro:IPR008598) Range:  from: 9491075    to: 9493923    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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