Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100              ------>NtERF2           --------->DEAR3(1)          <------NtERF2          <---------DEAR3(1)          --------->ATERF1(1)         --------->ABI4(1)                              ------->GAMYB         <---------ATERF1(1)                           --------->MYB46(3)         ------>NtERF2                            ------->GAMYB         <---------RAP2.3(1)                     --------->ANAC58        --------->ANAC46                         --------->ANAC46        --------->RAP2.3(2)                      --------->ANAC58        --------->RAP2.3(3)                    <---------DOF5.7(2)        <---------DEAR3(1)                    <---------WRKY45        --------->DEAR3(1)                    <---------WRKY38(1)   <---------ARR14(2)        <---------ATERF1(2)                   <---------WRKY12   --------->ANAC46        --------->ATERF1(2)                  --------->DOF5.7(2)--------->HSFB2a(2)       --------->DEAR4(2)                   <-----------HVH21   <---------HSFB2a(2)       --------->ERF1                    <---------At5g28300  ------>MYB83       --------->ORA47(2)                --------->MYB52(1)   -------->P       --------->RAP2.3(1)              --------->MYB55(1)    ------>MYB46(1)                       -       --------->ATERF1(1)             --------->MYB46(3)   <---------MYB59                         -      <---------ATERF1(1)              <---------MYB52(2) --------->AGP1                    ---------     ------->GAMYB                   <---------ICU4    --------->DEAR3(2)                   ---------    --------->MYB46(3)            <---------HSFB2a(2)------>NtERF2  --------->ARR14(2)      --------- ----STY1(1)--------->LBD16       --------->HSFB2a(2)--------->MYB52(1)--------->ANAC46  --------->ANAC46 --->STY1(1)<------NtERF2         --------->TOE2(3)  ----------->RAV1(1)--------->LBD16  --------->O2   ggtccaatcgccgccgcgcgagcatgagataaacttccataactaccgtcaacgccaacagacctactcgaaaccgcaagagacactttccacgacgcaa  9485800                            --------->DAG2                           ---------->DOF2                       ------>NtERF2                       --------->RAP2.3(1)           <---------HSFB2a(2)                       <------NtERF2             <---------GLK1(1)                      ------>NtERF2              --------->GLK1(1)                      --------->LBD16           <---------ARR14(2)                     <---------DEAR3(1)         --------->ARR14(2)                    <---------LBD16            <xxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                    --------->LBD16           <---------MYB46(3)              <---------MYB59 -------->TOE1(1)   --------->At4g35610     --------->At5g28300               --------->TOE1(3) -------->TOE2(1) <---------LBD16         <---------DEAR3(1)          <------NtERF2 >ANAC58        <---------ARR14(2)     ----------->HVH21            --------->ETT(1)   ------>NtERF2 >ANAC58        --------->ARR14(2)    --------->DEAR3(2)          <-----------HVH21   --------->DEAR3(1) >ANAC46       <---------GLK1(1)  ------>ZmHOX2a(1)  --------->HSFB2a(2)      --------->TOE2(3)     -   tctcggactgaaactgcaaatccgcggcgaaaagtcctgaatcgacggtggatatcgcgaagagagaatgtcggagcaaacctaaacgacgacggagatg  9485900                                            <---------DEAR3(1)                                         ----------->HVH21                                       --------->MYB52(1)                                     <---------MYB52(2)                                     --------->MYB46(3)                                    <------NtERF2                              ------>MYB46(1)                              ------>MYB83--------->MYB52(1)                      <---------O2 ------>NtERF2                                              -------                      --------->O2<----------ID1                                             <------ZmHOX2a(1)                  <------ZmHOX2a(1)----------->RAV1(1)                                    <---------HSFB2a(2)             --------->ALFIN1--------->MYB52(1)                                           --------->HSFB2a(2)        <------ZmHOX2a(1)   --------->AtMYB61 <------NtERF2                        --------->CCA1(2) --------->DOF2 <---------ANAC46------->GAMYB------>NtERF2         <------ZmHOX2a(1)<-------TEIL   gagaaagtaaggagagtggaggagacgagaccaacggcgacaaacgacggcgagagaaggaattgaagaggaagggactcttgagatacattcgaggagt  9486000                                                      <---------DEAR3(1)                                                      <---------AtMYB61                                                      --------->ALFIN1                                                      --------->MYB111(2)                                                      --------->MYB46(2)                                                      --------->MYB111(1)                                                      <---------MYB46(3)                                                     <---------MYB55(1)                                                     <--------P                                                   <---------DEAR3(2)                                                ------------>AtMYB77                                               ----------->HVH21                                              --------->SPL7                                          --------->LBD16                                         <---------ANAC46                                         --------->DEAR3(1)                                        --------->ATERF1(1)                                        <------NtERF2<---------MYB52(1)                                       --------->ABI4(1)                                       ------>NtERF2<-------GAMYB                                      --------->RRTF1(3)                                      --------->DEAR3(1)                                     --------                                      --------->RAP2.3(2)                                    <------MYB83                                      --------->RAP2.3(3)                                    <------MYB46(1)                                      <---------DEAR3(1)      ------>ZmHOX2a(2)             ---------                                      --------->ANAC46--------->MYB55(2)                 --------->ARR14(2)                                     --------->ERF1------------>AtMYB15            <---------SPL7                                     --------->DEAR4(2)     <---------AGP1        <---------DEAR3(1)                                     --------->ATERF1(1)    --------->ARR11(3)   <------NtERF2                                     --------->RAP2.3(1)  <---------MYB46(3)     --------->ATERF1(1)                                     --------->ORA47(2)<------MYB83             <-----------HVH21        <--------P                  <---------ATERF1(1)<---------MYB46(3)      <---------DEAR3(1)    <-----------RAV1(2)             <---------RAP2.3(1)<------MYB46(1)         <---------ANAC46   <---------MYB52(1)           --------->ARR14(2) <---------MYB46(3)   --------->ATHB12 <---------ARR14(2)  <-----------HVH21             <---------ARR14(2)<---------DEAR3(1) ----------->GT1<------NtERF2  <-----------TGA1      <---------At4g35610 --------->WRKY12--------->ARR14(2) <---------ANAC58 ---->GT1               --------->At4g35610--------->ALFIN1 <---------ARR14(2) <---------ANAC58   aaatcgtcaggtagagaagcgattgtagctgaagaattcgccgccgtggacgacggttggtggatctggactagtgatttggcgtcggagggatttggta  9486100                                                                                                   <-                                                                                                   --                                                                                     --------->CCA1(2)                                                                                    <---------ARR11(3)                                                                                    --------->ARR11(1)                                                                                    --------->ARR11(3)                                                        <---------ARR11(3)        <---------TOE2(3)<-                                                        --------->ARR11(3)<---------AHL20(2)       --                                              --------->TGA2(1)           --------->AHL20(2)      <--   --------->ARR11(3)                         <---------TGA2(1)          --------->AHL20(1)       ---   <---------ARR11(3)     <---------ANAC58    --------->bZIP60(1)        <---------AHL20(1)   ------- --->GT1                  <---------ANAC58    <---------bZIP60(1)        <---------AHL20(2)   <------ >MYB59                   <---------ANAC46 ----------->HVH21             --------->AHL20(2)   -------   aacaagatttcatgagccatgagaaatggcgagaattgcagttttctgacatcagaattatcttcagagaacaaatttaattctaagatatgaaaataaa  9486200        <---------CCA1(2)       <---------AHL20(2)      --------->YAB1     <---------YAB1   <---------ICU4   -------->ATHB1   --------->YAB1  --------->AHL20(2)  <---------ATHB51  <---------AHL20(2)  --------->ICU4 --------AHL20(1) ------->AHL20(2)                                                                   ----------->GT1 --------AHL20(2)      <---------ANAC46                                         <---------AHL20(2) ------->AHL20(1)      <---------ANAC55(2)                                     <---------AHL20(2) -------AHL20(2)       --------->ANAC55(2)                                     --------->AHL20(2) ------>AHL20(2)      <---------LBD16                ----------->GT1        --------->AHL20(2)      < -->AHL20(2)         --------->MYB52(1)            ---------->DOF2         --------->AHL20(2)   <---- ---AHL20(2)        <---------ARR14(2)           <---------TOE2(3)         <---------AHL20(2)   <---- -->AHL20(1)<-----------RAV1(1)         ----------->GT1            <---------ZAT18 <---------------AtSPL8   ataaattattatatctgtgggagttacggagttgagagggaagtgtgatttaagaaagtaaaaagactatgcactaaataaataaatagtacatactgct  9486300                                                                                          <---------TOE2(3)                                                                                        --------->AHL20(2)                                                                                        <---------AHL20(2)                                                                                       <---------YAB1                   --------->AtLEC2                                                 <---------YAB1                   --------->ANAC58                                                 <---------AHL20(2)                   --------->ANAC58                                                 --------->AHL20(2)                  <-------MYC3                                                     --------->AHL20(1)                  ------->MYC3                                                     <---------AHL20(2)        --------->ARR14(2)                                                         <---------AHL20(1)        <---------ARR14(2)                                                         --------->AHL20(2)  --------->ANAC46<-------MYC2            <---------ANAC58                        --------->YAB1 -----------GT1   ------->MYC2            <---------ANAC58                    --------->AHL20(2)    - -----DAG2<-------TEIL                    <---------ANAC46                ------>ZmHOX2a(1)         - ------DOF2   <-------TEIL             <----------DOF2       ---------->DOF2<----------DOF2         -   ttatactccatatacgtacacatgcaaattcaactacttagctttcgtttatgggttatctactaaagtactaatcctcttttaatataattaatgaagt  9486400                                                    ------>NtERF2                                                 <---------LBD16                                                --------->ARR14(1)                                                --------->CCA1(2)                                               <---------ARR11(3)                                               --------->AGP1                                               <---------ARR14(2)                                               <---------AGP1                                               --------->ARR11(1)                                               --------->ARR14(2)                                             ----------->ARR10                           --------->CCA1(2)                                   <------MYB46(1) --------->LBD16                      --------->ARR14(2)                                   <------MYB83--------->ARR11(3)                       <---------ARR14(2)            <----------DOF2       --------------->AtSPL8                           ---------->DOF2      --------->YAB1              --------->MYB111(1)      ----------->GT1   --------->ZAT6 -------->TOE1(3)                 <---------------AtSPL8--------->AtLEC2<---------At4g35610       <-- -------->TOE2(3)          --------------->AGL15<------ZmHOX2a(2)       --------->At4g35610   ------- -------->YAB1     ----------->GT1--------->MYB59------>ZmHOX2a(2)--------->AHL20(2)   <------ZmHOX2a(1)   aatcttaactataactttgtatagtttaacttatattaggtactaactagatccggccatgcagaaaattatacagctaagactaaaaaggatatgaatt  9486500                                                                     <---------TOE2(3)                                                                --------->ATHB12                                            --------->AHL20(2)  -------->HAHB4            <---------DAG2                  --------->YAB1     <---------YAB1 ---------GT1   <---------YAB1  <<<<<<<<<<<<<<<<<LFY           --------->ICU4 >TEIL <-----------GT1         --------->ANAC46                <---------ATHB12   tcacttgtttttcaatttttgatagtaactcatactccattggcaataaaactacaaggccttaaatgattgtggtttttcaaaaacatttctccaaaaa  9486600                    <---------ANAC58                    <---------ANAC58       --------->GLK1(2)       --------->ARR11(3)      --------->GLK1(1)                               --------->ANAC46      <---------GLK1(1)----------->GT1            <-----------GT1    <------ZmHOX2a(1)  <---------MYB46(3) --------->ANAC46           <---------AHL20(2)      --------   aaaacaggaaatctagttttttgagtggttttaagtatgtttccaagacaaattacaatccatttccatatttttttggttttaagtatgtttccaagac  9486700  Previous    Next  AGI:  At5g26960.1    Description:  kelch repeat-containing F-box family protein. Identical to F-box/kelch-repeat protein At5g26960 [Arabidopsis Thaliana] (GB:Q6NPN5;GB:O04638;GB:Q67ZX2); similar to unnamed protein product [Vitis vinifera] (GB:CAO67316.1); contains InterPro domain Kelch repeat type 1 (InterPro:IPR006652); contains InterPro domain Kelch-type beta propeller (InterPro:IPR015915); contains InterPro domain Cyclin-like F-box (InterPro:IPR001810); contains InterPro domain Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043) Range:  from: 9484737    to: 9486152    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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