Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100    ------>ZmHOX2a(1) --------->TOE2(3)                                             <---------MYB59 ----->ZmHOX2a(2)              <---------GLK1(2)        <---------ARR14(2) -------ARR14(2)               <---------ARR14(2)       --------->ARR14(2)                     ------ ------>ARR14(2)               --------->ARR14(2)  <---------ALFIN1                       <------MYB83 -------ARR11(3)     <------ZmHOX2a(1)            <---------SPL7 ------>MYB46(1)          <------MYB46(1) ------>ARR11(3)  <------ZmHOX2a(1)    <---------HSFB2a(2)    ----------------->AGL1    <--------P ------>ARR10   --------->ALFIN1       --------->HSFB2a(2) ----------->HVH21        <---------LBD16 >TGA1         <------ZmHOX2a(1) <-------TEIL --------->ARR14(2) ------>MYB83      <---------LBD16   gatcctcaattagcgaaggaggaggagacaatggattcgttgtggaagaaaccgcacgggtctgaccaaactcggtctggtttttctcgggttggagtaa  9483700                                                                                              -------                                                                                              <------                                                                                       ------>ZmHOX2a(2)                                                                                      <------ZmHOX2a(2)                                                                                     <---------ARR14(3)                                                                                     <---------ARR14(2)                                                                                     --------->GLK1(2)                                                                                     <---------ARR11(3)                                           ------>ZmHOX2a(1)                         --------->ARR14(3)                                       --------->ARR14(2)                            <-----------ARR10                                       ------->TEIL                                  --------->ARR14(2)                                       <---------ARR14(2)                 <-----------RAV1(1) <------                                   <---------TOE2(3)            ------>NtERF2<---------ANAC46 <------      --------->ARR11(3)          --------->MYB52(1)           ----------->HVH21     --------->ARR11(3)     <---------CCA1(2)       <----------DOF2 <---------ALFIN1  --------->ANAC46     <------ZmHOX2a(1) --->MYB52(1)            <---------ZAT18--------->HSFB2a(1)    <---------ETT(1)<------NtERF2  <------   cagaagcttatcttgtagtactcgtagaccactttctaacgaatcctccatctctaagactttctccgacaatttagtgtcgtcgaggatcttcttacgt  9483800                   --------------------->WRI1                   <----------DOF2              <---------DEAR3(2)              <---------MYB46(3)         --------->DAG2<---------ANAC58                                            <---------WOX13(1) -->ANAC55(2) <------MYB46(1)                                                <----------DOF2 ---ANAC58    <------MYB83 <---------AtLEC2                            <---------HSFB2a(2)   -------- ---ANAC55(2)--------->MYB59                      --------->At4g35610  --------->HSFB2a(2) <---------LBD16 ---ANAC46   <---------AtMYB61                 <---------At4g35610 --------->O2  --------->ATHB12 ---ANAC58  <--------P <---------ANAC58 <---------ANAC46      --------->ANAC46  <---------YAB1------>NtERF2   agaaacagagaaaggttggttcttttcttgcatcgctctctctcgtgtaatctgctaaacctctcagccatgtctcgaacttttgattgatcatccggcc  9483900                <-----------TGA1                <-----------HVH21               --------->ANAC55(2)   --------->ICU4   --------->ANAC58 <---------ANAC58   --------->ANAC58 <---------ANAC58<---------MYB52(1)             <-----------RAV1(1)         <----------DOF2 ->LBD16       --------->ANAC46  ----------->HVH21             ---------->DOF2 --------->TOE2(3)   atgtcttgatgagttttccgtcacgaccatagtatatgacacagacatcgatgttgcacagagtcgaaagctcgagggctttcttaaacatggtctgttc  9484000                                                                    <------MYB46(1)                                                                    <------MYB83                   <----------DOF2                                 --------->MYB59             <<<<<<            <---------ANAC58       >>>>>>>>>TBF1      <---------ANAC46                   <<<<<<<<<MYB2            <---------ANAC58 --------->ALFIN1         <---------ANAC58                 <------MYB46(1)           <-------TEIL    <---------ANAC46           <---------ANAC58                 <------MYB83   tctcatagacaaattcgtggtcttttttgcagtggaagaagaagacagggacgatttcttgaaacaagtttggtttctcacagacaatttggttttcttc  9484100                                                                     <---------YAB1                                                      <---------ARR14(2)                                                      --------->ARR14(2)   <---------DDF1                               >>>>>>>>>TBF1    <---------ANAC58  --------->ETT(2)                ----------->RAV1(1) <---------ARR11(3)  <---------ETT(2)  <-----------RAV1(1)  ---------->DOF2         <---------ANAC58 <<<TBF1      --------->GLK1(2)  --------->MYB46(3)   --------->ARR11(3)         --------->TOE1(2)  -   ttcgtcgacattgaagaatccattgttgttgtttacccacagaaaaagaagaagaagatacctagtttcttatcagagagaaacctagaaaataaactct  9484200                             ----------->GT1                     --------->ANAC46                     --------->ANAC58                     --------->ANAC58             <---------MYB111(1)             <---------MYB52(2)             <---------MYB46(2) <-----------TBP             <------------MYB.PH3(2)                               <---------AHL20(1)        ----------->GT1   <-----------RAV1(2)                      <---------AHL20(2)        <---------ZAT6   <-------TEIL             --------->YAB1  --------->YAB1   --------->YAB1  --------->MYB52(1)     ----------->GT1       --------->AHL20(2)  <-----------GT1 -------->YAB1 --------->MYB52(1)       <------------CBF  <-----------GT1   <------------CBF      <--   tagaataatagtgtaactaacacacggttcagggttatatagaattgtgaaattatagtatttccatataatatttgatattgattttactaaaccaaga  9484300                                                                      <---------AHL20(2)                                                                      --------->AHL20(2)             --------->ALFIN1            --------->GLK1(2)        --------->ARR11(3)           --------->ALFIN1              <---------ARR14(2)       <---------ARR11(3)           <-----------RAV1(1)           <---------ARR11(3)      --------->YAB1         --------->ZAT2    <----------DOF2  <----------DOF2     <---------YAB1         <---------At4g35610             <-----------ARR10    --------->YAB1         <---------MYB52(1)         --------->At4g35610             --------->ARR14(2)  <---------YAB1       --------->MYB46(3)         <---------ZAT2    <---------DAG2--------->ARR11(3)  --------->ICU4     --------->MYB52(1)    <------------CBF   <-----------GT1  <---------ARR14(1) --------->YAB1 --------->AHL20(2) --------ID1 <---------ANAC46    <----------DOF2      --------->AHL20(2)  <---------AHL20(2)   gagacaaattgagctgtgggttttatttcctttttctttagagtatcttttcttcattatatgatgatgatattaattaatctaaccgttggcatttttc  9484400                                             --------->AHL20(2)                                       ----------->GT1                                      ------->MYC2                                      <-------MYC2                                      ------->MYC3                                      <-------MYC3                                         ------>ZmHOX2a(2)                                     <---------ANAC58                                     --------->CCA1(2)                                     <---------TGA1a                                      <------ZmHOX2a(2)                                     --------->TGA1a                                     --------->ARR11(3)             <---------ARR11(3)      <---------ANAC58                                    <---------ARR14(2)             --------->ARR11(3)      <---------O2                                        <---------ARR11(3)             --------->GLK1(2)       --------->ANAC55(2)                                 <---------AGP1            --------->RVE1(1)        <---------ANAC46                        <---------GLK1(1)         --------->AHL20(2)          --------->O2                            --------->GLK1(1)         --------->YAB1          <-----------HVH21           <---------WOX13(1)          --------->AGP1     <---------YAB1            ------>ZmHOX2a(1)           --------->ATHB12======================HOX2a_HOX2a   --------->YAB1          <-----------GT1   <---------AHL20(2)  <---------GLK1(1)       --------->ARR14(2)   ----------->GT1 ============================bZIP_DOF<---------AHL20(2)  =======================HOX2a_HOX2a <------------CBF  <----------DOF2   <---------ANAC55(2)  <---------YAB1   <------ZmHOX2a(1)      <--   agtaattgtaataaaaatcttcttttttttttcctgatcacgtgtaataaaatccattttatgattgatatcagagaggaaatctaatttagatctgatt  9484500                                                                                             <-------                                                                                             <-------                                                                        --------->At4g35610  --------                                                                        <---------At4g35610  --------                                                                  <---------TOE1(3)        ----------                                                            --------->AHL20(2)        <---------ANAC58                                                            <---------AHL20(2)        <---------ANAC58                                                            <---------YAB1            <-------GAMYB                                                           --------->AHL20(2)   --------->GLK1(2)                                                           <---------AHL20(2)   --------->ARR11(3)                        ----------->GT1                 --------->AHL20(1)      <---------ARR11(3)                    --------->MYB46(3)                  <---------AHL20(1)     --------->CCA1(1)                  --------->MYB52(1)                    --------->AHL20(2)     --------->RVE1(1)          <---------ARR11(3)                     <-----------GT1  <---------TOE2(3)  <---------MYB46(3) -------YAB1 --------->WOX13(1)  --------->AHL20(2)     <---------AHL20(2)   --------->AHL20(2)   ttcatttaccaatatcaatctaaccgttgtaaaaaaaaaattctacatattttactaatattttaattaaggtcagcaaaaaaatcttggttgtctgcac  9484600  Previous    Next  AGI:  At5g26950.1    Description:  AGL93; transcription factor. Identical to Agamous-like MADS-box protein AGL93 (AGL93) [Arabidopsis Thaliana] (GB:Q7X9H9;GB:O04638); similar to AGL53, transcription factor [Arabidopsis thaliana] (TAIR:AT5G27070.1); similar to putative MADS-box protein AGL35 [Oryza sativa (japonica cultivar-group)] (GB:BAD81343.1); similar to hypothetical protein OsI_001431 [Oryza sativa (indica cultivar-group)] (GB:EAY73584.1); contains InterPro domain Transcription factor, MADS-box; (InterPro:IPR002100) Range:  from: 9483254    to: 9484123    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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