Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                               <-----------RAV1(1)                                  <-----------GT1                      --------->TOE2(3)     <---------TOE2(3)                      --------->TOE1(3)  <---------YAB1         <---------ANAC58                     ----------->GT1  <---------YAB1       <---------DAG2                          --         <---------ZAT14      <---------TOE2(3)            <----------DOF2                        <-- <---------DAG2      --------->ANAC46 --------->ICU4 ------>ZmHOX2a(1)                            <-- <----------DOF2    <---------TOE1(3)--------->TOE2(3)  <-----------GT1                           --- ---------GT1   <----------DOF2----------->GT1       <----------DOF2    --------->ATHB12      <------ >GT1    --------->ZAT14    <---------AHL20(2)    ---------->ID1<---------ANAC58              <------   taactttattctatactgctttcacgttaaataatgtaacattattaatgttgtccttttacttttccttgaattgatttgggaagaagactattggctt  9479100                                           <----------DOF2 ---->ZmHOX2a(1)                          <---------ANAC58 -------ANAC58                        <---------ANAC58 -------ANAC58                        <---------ANAC58 ------>TOE2(3)          ----------->GT1  <---------ANAC58 ---ANAC58  --------->DAG2          <---------MYB46(3)       ---------->ID1 ---ANAC58 ---------->DOF2      --------->ATHB12         <----------DOF2                         <---   ccttatcacatcaaaaagtctatgagtaagtgaaacattggctggcttttgcttcattcctttgtctctgtcttcatgtgaacaagtttgcagaaatttg  9479200                                                                                 --------->SPL7                                                                               <---------SPL7                                                                               <---------ZAT14                                                                               --------->ZAT18                                                                              <---------ANAC58                                                                              <---------ANAC58                                                                             <---------TOE1(2)                                                                          <---------MYB46(3)                                                                          <---------ANAC58                                                                          <---------ANAC58                                                                        <-----------HVH21                                                                      --------->LBD16                                                                     <---------LBD16                                                                   <------ZmHOX2a(2)                -                                                          --------->GLK1(2) <---------ANAC46      <--                                                     ----------->GT1------>ZmHOX2a(2)         <------             <----------DOF2                    --------->YAB1    --------->ARR14(2)         <-------          <-----------GT1                --------->MYB46(3)       --------->ARR11(3)         <-------    <----------DOF2            --------->ANAC46<---------YAB1     <---------ARR14(2)     <----------DOF2 ------TOE2(3)   <----------DOF2 <---------ALFIN1  ---------->DOF2<---------ARR11(3)  <---------ALFIN1   tggtttctttttttactttcttttgtctaatacacacactctcaccactattataaagaaaatccatagatcccggtcgtgcgtactgccactttgcttt  9479300        --------->ICU4        <---------YAB1        <---------ATHB12  ----------->HVH21  <---------ETT(1)  --------->ANAC46  ------->GAMYB                                              <---------ICU4 --------->MYB46(3)                                          --------->YAB1 <---------MYB55(2)                                          --------->ATHB12                    ---- -------->ANAC46                                             -------->ATHB1         --------->MYB52(1) -------ALFIN1     <---------ARR11(3)                       <---------YAB1      <---------ZAT18<----- ----DOF2          --------->ARR11(3)       -------->P      <---------ATHB12    --------->ZAT18<----- --ANAC58<--------ATHB1          <-----------HVH21          --------->ICU4 ---------->DOF2  <-------- --ANAC58--------->ATHB12     <---------ANAC46    ---------->DOF2        ---------->DOF2  <----------DOF2   ccacccgacaatgatttgggagatgttttgttttgtgtcatacatctaccaaaaaagtcttaatcattgttcatcaaaagagcgcccaagggctctttcg  9479400                       <---------HSFB2a(2)              --------->ZAT6                                                         <---------ATHB12          --------->ANAC58                                                          ------>MYB83          --------->ANAC58                                                          ------>MYB46(1)          --------->ANAC46              --------->GLK1(1)                        --------->MYB46(3)   <-----------GT1     --------->HSFB2a(2)            <---------ANAC58       --------->ANAC58 ------>ID1   --------->ANAC58          <---------GLK1(1)              --------->ANAC58 ----ANAC58   --------->ANAC58        <------ZmHOX2a(1)                --------->ANAC58   ---------->ARF1 ----ANAC58  --------->ZAT18        <---------TOE2(3) <---------ANAC58 <---------MYB52(2)<-----------HVH21 --DOF2 <---------ALFIN1    ----------->GT1        <----------DOF2   *TSS    --------->ANAC58      <-   tcttcttaccacacgcacactagttcgagagggtttttaaggagctcttaagcctttcttgatgactcataccacgaacaagaaccaatcttgtcaccca  9479500                                                                                                    -                                                                                                    -                                                                                                    -                                                                                                  ---                                                                                                 ====                                                                                                 ----                                                                                                <----                                                                                                =====                                                                                               ------         --------->ARR14(2)                                --------->ZAT6>>>>>>>>>ARR1         <-----         <---------ARR14(2)              <-----------RAV1(1)             >>>>>>>>>ARR2         ------       --------->LBD16             --------->ZAT6         --------->GLK1(1)         <---------AHL20(2)     <---------LBD16               <---------ICU4    --------->DAG2    <---------TOE2(3)    <-------- --------AHL20(2)          --------->ARR11(3)       ---------->DOF2    <---------YAB1<---------AHL20(2)   tataatctccgtattcagagaattgaagagttcttgatcactactgttgtatcaaaaaggaactctaagaactaagattgtttttttttatttgatggat  9479600     <---------At4g35610     <---------HSFC1(2)         <-----------HVH21     --------->HSFC1(2)      <---------TGA1a    --------->ANAC58         --------->TGA1a    --------->ANAC58         <---------bZIP60(2)                     --------->ALFIN1 -------->ANAC58             <---------ANAC58                        <-----------RAV1(1) -------->ANAC46             <---------ANAC55(1)                     <---------REM1(1) -------->ANAC58             <---------ANAC58                      <---------ANAC55(1) ------>TOE1(2)              <---------ANAC55(2)                   --------->ANAC55(2) ==============================HOX2a_HOX2a                         <---------ANAC55(2) -->ZmHOX2a(2)               <---------O2                          <------MYB46(1) --ZmHOX2a(2)                <---------ANAC46                      <---------ANAC46 ==============================HOX2a_HOX2a                         <------MYB83               ------- ->TEIL                      --------->ANAC55(2)          <----------ID1                      ------- ----ARR14(2)                ===========================bZIP_DOF  --------->MYB111(1)         ------- --->ARR14(2)           ------>ZmHOX2a(1)                 --------->ZAT18                --------->AtMYB61 -WOX13(1) --------->ARR11(3)--------->O2    ---------->DOF2      --------->MYB59<---------ZAT6   >>>   ccaaggaagctactatcttgttcatcctcttacgtgtcagtgagaatgaaagaagagaaggggacaattaggtgttgcagtgagtgtaagaccaccaaga  9479700                    -------->P                    ----------->RAV1(2)                    ------>MYB83                                                    --------->ARR11(3)                    ------>MYB46(1)                                                 <---------ARR11(3)                   --------->MYB52(1)            --------->AHL20(2)               <---------TOE2(3)     --------->ALFIN1                            <---------AHL20(2)               <---------YAB1 -->ANAC46   --------->ALFIN1   --------->ARR11(3)           <-------TEIL     ------>ZmHOX2a(2) -->ANAC58--------->ALFIN1      <---------ARR11(3)   <-----------GT1        <---------ARR11(3) -->ANAC58<---------AtMYB61 ------>ZmHOX2a(1)  <----------DOF2--------->YAB1--------->ARR11(3) >>>>>>>>>>>>>>LFY--------->MYB46(3)          --------->TOE2(3)     <----------DOF2--------->YAB1   caccaatgtggagaggtggaccaactggtcctaaggtctcttcttctacctttaattactatattcataactttgtttgatcttaagataattcatcaag  9479800                                --------->GLK1(1)                             ----------->ARR10                           <---------ANAC46            <-------MYC3                             <----                         <---------MYB46(3)            <-------MYC2                             <----                  --------->ATHB12                     ------->MYC3                             <----                 <---------YAB1--------->ARR14(2)      ------->MYC2                        --------->ATHB12            <---------AHL20(2) <---------ARR14(2)    ------->TEIL                    --------->YAB1        ----------->GT1 <---------AtMYB61  <----------DOF2                          <------ZmHOX2a(2)   tgttcttaagttgtttattttgatttgtggtgggatttgcagtcactttgcaatgcatgtggaattagacacagaaaacagagacgatcagagttattgg  9479900                                                                             <------NtERF2                                                                             --------->At5g28300                                                                            <---------MYB46(3)                                                                           <---------ANAC46                                                                           <---------DEAR3(1)                                                                           <---------DREB2C(2)                                                                          <---------ABI4(1)                                                                          <------NtERF2                                                                        ----------->HVH21                                                                        <---------DEAR3(1)                                                                        --------->ATERF1(1)                                                                      --------->O2                                                                      <---------bZIP60(2)                                                                      <---------TGA1a                                                                      <---------ANAC58                                                                      ===============================                                                                      <---------ANAC46                 --------->RAP2.6(2)                                  <---------ANAC58           --------->ANAC46                                          <------NtERF2      <---------AHL20(2)                                 <---------ICU4 <------NtERF2      <---------YAB1 ---------->DOF2                     --------->YAB1 --------->ALFIN1  --------->YAB1 ----------->RAV1(1)                    <---------YAB1<---------O2               ---- -----ANAC46   ------>NtERF2                          --------->YAB1------>NtERF2          <------ZmHOX2a(1) -----ANAC58  --------->DEAR3(1)                     <---------YAB1--------->ALFIN1 --------->MYB52(1) -----ANAC58  --------->ANAC46                     --------->YAB1  <---------DEAR3(1)  --------->TOE1(2)   gtattcatattattcgcagccacaaaagcttagcctccaagaagataaacctattatcatcatcacacggtggcgtggcggtgaagaaacgaaggagtct  9480000  Previous    Next  AGI:  At5g26930.1    Description:  zinc finger (GATA type) family protein. Identical to GATA transcription factor 22 [Arabidopsis Thaliana] (GB:Q8LC59;GB:A0MFI4;GB:O04636;GB:Q29PW7); similar to GNC (GATA, NITRATE-INDUCIBLE, CARBON METABOLISM-INVOLVED), transcription factor [Arabidopsis thaliana] (TAIR:AT5G56860.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO17469.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN74414.1); contains InterPro domain Zinc finger, NHR/GATA-type; (InterPro:IPR013088); contains InterPro domain Zinc finger, GATA-type; (InterPro:IPR000679) Range:  from: 9479469    to: 9480203    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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