Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                             <---------                                                                                           ----------                                                                                          >>>>>>>>>RAP2.2                                                                                        <---------ARR11(3)                                 <-----------GT1                               --------->ARR14(2)                     --------------->AtSPL8                       --------->TOE2(3)     --------->ARR11(3)                  --------->ARR11(3)                             <<<<<<<<<ARR1 <---------ARR11(3)                  <---------AHL20(2)                             <<<<<<<<<ARR2 <---------ARR14(2)                  <---------AHL20(1)                   <----------DOF2         --------->ARR11(3)   <---------GLK1(2) <---------------AtSPL8         <-----------GT1           <------ZmHOX2a(1) -----TOE2(3)     --------->AHL20(1)               <<<<<<<<<<GT-3b--------->YAB1--------->GLK1(1)   gtttagaatttctattctaatattttgtacatattttacaatatttagactatttttctttctaacaatcttagaaaataggatattcaatatctaaaaa  9460100                                                                                            <-------MYC3                                                                                            ------->MYC3 ------AGL15                                                <---------ICU4             <<<<<<<ZML2 ----->AGL15                                                <---------GLK1(2)    --------->ZAT6   ---   ttgtagaacatgtattctaaaattccttcatgttctaaactatgtgtgaaattgtattctaagaatttctatagtttctgaaaacactagaacacgtttt  9460200                                                                                   ------->TEIL                      <---------AHL20(2)                                      ----------->GT1               --------->HSFB2a(2)                                           --------->DAG2            <----------DOF2                                                 ---------->DOF2            <---------DAG2       --------------->AGL15                   ----------->TBP         ----         <-----------GT1      <-----------GT1                          --------->CCA1(2)       ------       <-----------GT1--------->AHL20(2)                              <---------ARR11(3)     -------- ------------------>WRI1    <---------AHL20(2)                      ----------->GT1--------->GLK1(2)   cttagaaattttcacttttagaatttatattttaacccaaattagttttttgtttctaaactatttagaatagatataaaaagtgaatctttgaaaaaag  9460300                                    --------->AtLEC2         --------->ATHB12           --------->ANAC58         <---------AHL20(2)         --------->ANAC46        --------->ICU4     <---------AHL20(2)                              <-----------GT1     --------->AHL20(2)  <---------YAB1                      --------->ANAC58     <---------AHL20(2)<---------ICU4                        --------->ANAC58 <---------AHL20(2)    --------->ATHB51              --------->At4g35610  ----------->HVH21 --------->AHL20(2)    <--------HAHB4            --------->MYB52(1)  ------------>CBF ----->AHL20(2)        -------->ATHB1    <---------MYB52(2)  --------->AtLEC2 ----->GT1            --------->ICU4--------->ANAC58 <---------At4g35610<------------CBF       <----- -->DOF2--------->AHL20(2)--------->AHL20(2)     <-----------GT1  <------------CBF           <xxxxxxx   aaaataaatatttattagatttgaattattaaatctacatgcaactaaaattaacagctcaacatgcaaattgcaattgacacttcatgagacacaaaat  9460400                                                                                                 ----                                                                                                <----                                                                                               ------                                                                                               <-----                                                                                              <------                                                                                              ------>NtERF2                                                                                             --------                                                                                             --------                                                                                            ---------                                                                                            ---------                                                                                            ---------                                                                                            <------NtERF2                                                                                           ------>NtERF2                                                                                           <---------ATERF1(1)                                                                                           <---------ERF1                                                                                           <---------ORA47(2)                                                                                           <---------RAP2.3(1)                                                                                           <---------DEAR4(2)                                                                                           <---------RRTF1(1)                                                                                           <---------RAP2.6(1)                                                                                          <---------RAP2.3(3)                                                                                          <---------RAP2.3(2)                                                                                          --------->DEAR3(1)                                                                                          <---------ATERF1(2)                                                                                          --------->ATERF1(2)                                                                                          <---------DEAR3(1)                                                                                         <---------ABI4(1)                     ------->GAMYB                                                       --------->RAP2.3(1)                    <---------ATHB12                                                     <------NtERF2                    --------->MYB46(3)                                                   --------->ATERF1(1)                   ------>MYB46(1)                                                      <---------DEAR4(2)                   -------->P                                                           <---------RAP2.3(1)                 --------->AtMYB61                                                      <---------ATERF1(1)                 <---------MYB111(1)                                                   <---------DEAR3(1)                --------->DEAR3(2)                                                    --------->At4g35610    ---------->DOF2------>MYB83                                          <-----------HVH21<---------ANAC46 -------CBF     --------->MYB46(3) <---------ARR11(3)                    xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3) xxxxxxxxxxxxxxxxsmallRNA(si3)     --------->ARR11(3)          --------->CCA1(2)      <---------At4g35610   tgagagaaaagactaagaaccaaccaagtgattctaagaacttaacaaatcgaaacagttcttagagatgagacctgtgagggaagagagcggcggcgac  9460500                                  <------NtERF2                                 --------->LBD16                                <---------ANAC58                                <---------ANAC46                                <---------ANAC58                               <------NtERF2                               --------->ATERF1(1)                  <---------DEAR3(1) <---------MYB52(1)          <---------DEAR3(1)                  --------->TGA1a -->NtERF2             <---------ARR14(2)               --------->ATHB12               --------->At4g35610 -----ALFIN1           --------->ARR14(2)            --------->At4g35610               <---------At4g35610 --->ATERF1(1)        <-------GAMYB                  <---------At4g35610             <-----------RAV1(2) -NtERF2             <---------MYB46(3)          <xxxxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)----------->HVH21 ---ATERF1(1)       <---------ANAC46            ===========================MYC_MYB  <-------TEIL --->HVH21          <---------RAP2.6(2)         <-------GAMYB    --------->O2      --------->CCA1(2) ->DEAR3(1)         <---------DEAR3(1)         <---------MYB46(3)<---------TGA1a   --------->GLK1(2) >ATERF1(1)    <----------DOF2 <---------LBD16 <------MYB83  <-----------HVH21    --------->ARR14(2) >RAP2.3(1) ------>NtERF2 <-----------RAV1(1)  <------MYB46(1)   <---------O2    xxxxxxxxxxxxxxxxxxxx >RRTF1(1)  <------NtERF2 <---------AtMYB61   <---------AtMYB61  ----------->HVH21<---------ARR14(2)   accgttctgaaggcggactttggcggttttggtggcggagaaggaagggaggttgagatgagtggtcacgacggtgatgaagaagattcaggtgactttg  9460600              --------->AtMYB61              ----------->RAV1(1)                 ----------->RAV1(1)             --------->MYB46(3)                <xxxxxxxxxxxxxxxxsmallRNA(s)           ------>NtERF2                       ------>NtERF2           --------->ORA47(1)               ------>NtERF2           <---------ATERF1(1)             --------->DEAR3(1)          --------->DEAR3(1)              <------NtERF2          <---------ETT(1)                --------->ATERF1(1)         --------->RAP2.3(1)             ------>NtERF2         --------->ATERF1(1)            ----------->HVH21         <------NtERF2                  --------->DEAR3(1)         --------->DEAR3(2)             <---------DEAR3(1)         --------->ORA47(2)            --------->ATERF1(1)        ------>NtERF2                  --------->RAP2.3(1)        <---------ATERF1(1)            <------NtERF2                                  <---------ANAC46       <---------DEAR3(1)             <---------RAP2.3(1)                          --------->ALFIN1       --------->DEAR3(1)             ------>NtERF2                               ------->MYC3      --------->ATERF1(1)             <---------ATERF1(1)                         <-------MYC3     ------>NtERF2                    --------->LBD16                       <xxxxxxxxxxxxxxxxsmallRNA(s)     <---------ATERF1(1)             <---------DEAR3(1)                     ----------->HVH21    <---------DEAR3(1)               --------->DEAR3(1)                   <---------ATERF1(1)    --------->DEAR3(1)               <---------ATERF1(2)                <---------ANAC58 --------->ANAC58                    --------->ATERF1(2)                <---------ANAC58----------->GT1 --------->ANAC58                   <---------LBD16  ------->GAMYB      =================RAV        - ----------->HVH21                  --------->ATERF1(1)                 ----------->RAV1(2)         - xxx>smallRNA(le3)        ---------->DOF2<---------ATERF1(1)  ---------->DOF2----------->RAV1(1)    -   gacacgacgacgccgaccacagagaaggcaaagaaatcgccggcgacgacgacaacagagatggcaaagaaatcgcctgcgacatgtggagagtaagttc  9460700          <---------YAB1       --------->AHL20(2)       <---------AHL20(2)       --------->AHL20(1)                                          --------->CCA1(2)      --------->AHL20(2)           <---------AHL20(2)    <----------ID1 -------->LBD16           <----------DOF2             xxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3) -------->ANAC58 <---------At4g35610               <------ZmHOX2a(1) -------->ANAC58 --------->At4g35610        ---------->DOF2   ---------->DOF2 ---------->DOF2       <   gcccgaaaaaaaattatagagctgaatgcttttttttttaatcgagtaaaggaggaagagagacaaaagatagggtttgtgaaagagtctaatacattta  9460800                                                                             --------->AHL20(2)                                                                             <---------AHL20(2)                                                                     --------->AHL20(2)                                                                    <---------YAB1                                                                 --------->AHL20(2)                                                                 <---------AHL20(2)       <---------GLK1(2)                                         <---------YAB1     --------->MYB59                                            <---------AHL20(2)    --------->At5g28300     <---------TOE2(3)                                    <------ZmHOX2a(1)  --------->AHL20(1) --------->ARR14(2)    <----------DOF2           <-----------------AG--------->YAB1  ----------->GT1 <---------ARR14(2)    --------->TOE2(3)      --------->AHL20(2)--------->AHL20(2)  ----------->GT1 ------ZmHOX2a(1)   <-----------GT1    <----------DOF2  --------->MYB59 --------->AHL20(2)   gaggatttaggttctcaaaattttactttaaactagtatttcttttgtataaatagattaggaaattttaattataaaataaaatgagggtaaataagac  9460900                                                                         ------>ZmHOX2a(1)                                                                     --------->ARR11(3)                                                                     <---------ARR11(3)                                                                     --------->ARR14(2)                                                                     <---------ARR14(2)                                                                    <---------GLK1(1)                                                                    --------->GLK1(1)                                                                   --------->ARR11(3)                                                                   <---------ARR11(3)                                      ---------->DOF2             <<<<<<<<<RAP2.2                             <---------AHL20(2)             <---------YAB1                             --------->AHL20(2)           <---------AHL20(2)                   <-----                          <---------AHL20(2)              --------->AHL20(2)                   ------                         <---------AHL20(2)              <---------AHL20(2)           <-----------GT1                         --------->AHL20(2)              --------->AHL20(2)      --------->AHL20(2)                        <---------WOX13(1)               --------->AHL20(1)      <---------AHL20(2)  <---------AHL20(2) <---------AHL20(2)                  <---------AHL20(1)     --------->AHL20(2)   ttatttttttttgaaaaacctatttgattaatttataagaaaaagaaatagatggacaatttatttttagatatcctctagatttaatttccctcataaa  9461000  Previous    Next  AGI:  At5g26890.1    Description:  unknown protein Range:  from: 9460468    to: 9460719    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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