Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                  <----                                                                                                =====                                                                                                -----                                                                                                -----                                                                     <---------DAG2             -----                                                                     <----------DOF2            <----                                                               <---------MYB46(3)             -------                                                        <---------ANAC46                     ------>MYB46(1)                                             --------->YAB1    <------MYB46(1)               ------>MYB83                                             <---------ICU4    ----------->GT1              --------- --->MYB52(1)                               <---------ATHB51   <------MYB83                 --------- >MYB46(1)      ----------->HVH21           --------->ICU4    --------->MYB59     ---------->DOF2 >MYB83     --------->MYB46(3)     --------->ZAT6       <---------ANAC58     ------>NtERF2  ========= --MYB59 <------ZmHOX2a(1)         <---------ALFIN1     <---------ANAC58    --------->LBD16--------->AtMYB61   tggctgaagcaggaacaaatgacagattaagtcatcaacactggaaataatgaacaagtcgtgtttggttactttaccccgactaaatgcagaccaacag  9458800         <-------MYC2         ------->MYC3         <-------MYC3         <-------MYC4         ------->MYC2      <---------ALFIN1     <---------At4g35610     --------->At4g35610     <------NtERF2    ----------->RAV1(1) -----At4g35610 ===============RAV ------>RAV1(2)                              <-----------HVH21 ---->ZAT2                               --------->GLK1(2) ---->At4g35610                         <---------GLK1(2) -----ZAT2                             <------ZmHOX2a(1)                   <---------------------WRI1 -->MYB46(3)                         --------->LBD16                     --------->WOX13(1) -->RAV1(1)                         <---------LBD16                     <-------TEIL >MYB52(1)               -------->P<---------LBD16                     <------ZmHOX2a(2)          --- =======RAV          --------->AtLEC2<---------TOE1(2)                --------->AGP1           ------   ctgaggcagcacatgttcttgcaatgcaacctgtattcccaggaatctgtcaaggagagtataagttgtttagatccatcaacatgtactaagaagacca  9458900                                                                                               <-----                                                                                              <------                                                                                        <---------ALFIN1                                                                                       <------NtERF2                                                                                      ------>NtERF2                                                                                     --------->PCF2                                                                                     <---------TCP20                                                                                   ------>NtERF2                                                                                   <---------ATERF1(1)                                                                       <---------WRKY18(1) <---------LBD16                                                             <---------CCA1(2)     --------->LBD16                                                             <------------------------ANAC81 <-------                                                           --------->ANAC46      <---------LBD16 <---                                                 <---------At4g35610<---------ANAC58 --------->PCF5                         <------ZmHOX2a(1)       --------->At4g35610--------------------->WRI1<------NtERF2                   ----------->RAV1(2)        <---------At4g35610   <---------ANAC58------>NtERF2<--- ------>DAG2  <---------ZAT18              ---------->DOF2------>ZmHOX2a(1)  ------>ZmHOX2a(1)------- --->AtMYB61  --------->ZAT18   --------->AtMYB61--------->ZAT2--------->HSFB2a(1)--------->ANAC46   aaggtagcagtgagagtgcaaacctgaggagagaccaaaactacatgaagcagcttactcctcgcatcttccttgactccttctccggcccctcgcggca  9459000     <-----------GT1              <---------LBD16 <---------ARR14(2)               ------>ZmHOX2a(1) ------RAV1(2)               -------->P ---ZAT2                     ------>MYB83 ----HVH21   ----------->HVH21    <---------HSFB2a(2)                                              <- ------At4g35610             ------>MYB46(1)                  <------ZmHOX2a(1)                    -- ---NtERF2 <---------At4g35610    --------->HSFB2a(2)------->TEIL                       <---------ANAC58 -->ZAT2   --------->At4g35610<---------ALFIN1      <---------GLK1(2)                   <---------ANAC58   ggggatttttcttatctgactcgcctataccaactcctcggagagcatgagactgaatcttggaggaaaacgagttgatggagagagatagcttgccctt  9459100                                            <---------At4g35610                                            --------->At4g35610                                          <-----------RAV1(2)                                         <---------At4g35610                                     <---------WRKY18(1)                                    --------->WRKY12                                    ----------->HVH21                                    --------->WRKY38(1)                                  <---------O2                                  --------->TGA1a                         ------>NtERF2                                  <---------TGA1a                         ----------->RAV1(1)         <---------At4g35610      --------->O2                   ----------->HVH21                 --        <---------TOE1(3)       <---------ALFIN1          ---------->DOF2<---------ETT(1)       <---- --------At4g35610         --------->RAP2.6(3)          ------>ZmHOX2a(1)----------->HVH21     ------ ------->At4g35610----------->GT1 ===================================bZIP_DOF <---------At4g35610 ---   gagatgagttaagctaagagagggaaatagacggccacttgaccgcagatgaaacgtccttgaagctatgacgctccgacagcaactctccattccctcg  9459200                    <---------GLK1(2)                    --------->ARR14(2)                    <---------ARR14(2)                   --------->HSFB2a(1)                <---------At4g35610                <------NtERF2               --------->ANAC58               ----------->RAV1(1)              --------->ATERF1(2)              --------->RAP2.3(3)              <---------ATERF1(2)             --------->ATERF1(1)             <------NtERF2            ------>NtERF2            --------->ABI4(1)            <---------SPL7           --------->RRTF1(2)           --------->ATERF1(2)           --------->DREB2C(2)           --------->RAP2.3(3)           --------->RAP2.3(2)           <---------ATERF1(2)           --------->DEAR3(1)          --------->ORA47(2)          --------->ATERF1(1)          --------->DEAR4(2)          --------->RRTF1(1)          --------->RAP2.3(1)          --------->ERF1         --------->At4g35610         <---------At4g35610         --------->LBD16                <---------AHL20(1)         --------->ABI4(1)    <-----------HVH21<---------ATHB12         ------>NtERF2       --------->bZIP60(1)         <---------ANAC46         <---------ATERF1(1) <---------O2<---------CCA1(1)  <---------GLK1(2)        --------->DEAR3(1)   <---------bZIP60(1)        <---------LBD16        --------->ANAC46     --------->bZIP60(2)  <------------CBF       <---------LBD16    --------->ANAC46   --------->WOX13(1) <----------DOF2 ---->NtERF2<---------ATERF1(1)         --------->AHL20(1)  --------->ARR14(2)        <---------ARR11(3) -----ATERF1(1)--------->ANAC58         <---------ARR11(3)  <---------ARR14(2)       <---------CCA1(2) --->ANAC46<---------ALFIN1  --------->O2<---------RVE1(1)<------NtERF2     ------------>CBF ------>DEAR3(1)--------->LBD16  *TSS   --------->ARR11(3)--------->LBD16   <---------ATHB12     ----   cctcccttctccgccgcccgcagattccacgacgtcaaataagatattaatcaattgggccggatacttttaggcccattcaatactatatctaatcgct  9459300                 --------->ZAT18               --------------->AtSPL8               <---------------AtSPL8                                       <---------------AGL15              <---------TOE1(3)                               --------->GLK1(1)              <---------TOE2(3)                   ----------->GT1           --------------->AGL15     <------------CBF                   ---------->DOF2       <---------GLK1(1) ------>DOF2  <---------ANAC46        <---------ZAT6  <---------AHL20(2) <-----------GT1           --   aaagatgaattgggttaagggtactacttcaacttaagtagtgaaagttgacatgttaaattcgatttccatattttacattttgaagaaaacatacaat  9459400                                                                        <---------ATHB12                                                                     <---------AHL20(2)        ------                                                          <----------DOF2                    ------>ZmHOX2a(2)                                                       <---------ARR11(3)        ----------------->AGL3                                                       --------->ARR11(3)        <-----------------AGL3                             --------->GLK1(1)         --------->ARR14(2)--------->YAB1     <------ZmHOX2a(2)                 <---------AHL20(2)                    <-----------ARR10--------->ICU4     <---------ARR11(3)                <---------AHL20(2)                     <---------ARR14(2)-------->HAHB4    --------->ARR14(2)            --------->AHL20(2)                         <---------ARR11(1)<---------ICU4    <---------ARR14(2)            <---------AHL20(2)                        <---------CCA1(2)<---------TOE2(3)   --------->ARR11(3)         <---------GLK1(2)   <---------GLK1(1)  --------->GLK1(1)    --------->AHL20(2)  --------->MYB59 --------->GT1  --------->AHL20(2)              <---------GLK1(1)   --------->AHL20(2)   ----------->ARR10   cgggttatatagaattttttaaattcgatcgatttccatatttcatactgatttccatatcttttcttcatttaatgatgaaatctaaaattagatccta  9459500                              <---------AHL20(1)                              --------->AHL20(1)                     <---------YAB1                   -------->ATHB1                   --------->YAB1                   <---------ICU4                   --------->ATHB51                   <---------AHL20(2)                   -------->HAHB4                        <---------ICU4                   <--------HAHB4                        -------->ATHB1                  --------->ICU4                         --------->ATHB12                  <---------ATHB51  <---------TOE1(3)    --------->ATHB51             ----------->GT1  --------->AHL20(2)        <---------ATHB51           --------->SPL7 <---------AHL20(1)            <---------YAB1          <---------MYB52(1)  <---------AHL20(2)        --------->ICU4         <---------SPL7   --------->AHL20(2)        <---------MYB52(1)     ------->GAMYB<---------YAB1    <---------TOE2(3)------------>ATHB5                         -----    --------->MYB46(3)<---------AHL20(2) --------->ANAC58-------->HAHB4                         -----    <------------AtMYB77  --------->AHL20(1)       --------->TOE2(3)                            -----    --------->DEAR3(2)--------->AHL20(2) --------->ANAC58<---------AHL20(2)          <-----------RAV1(1) >ZmHOX2a(1)--------->DAG2<---------AHL20(2)       --------->TOE1(3)          >>>>>>>>>>>>>>>>>LFY   tttctaaccgtcgtaaggtaattattaattaattaattaaggtaagcaaaaacccttaattattgtcttcacattgaagaacccattgtgttgtttacac  9459600          --------->AHL20(2)                            ----------->HVH21                          --          --------->YAB1                              <---------ANAC55(2)                          --       --------->YAB1                                 --------->ANAC55(2)                          <-     --------->AHL20(2)                            --------->ICU4                                  <-     --------->AHL20(1)                          <---------ICU4                                   <--    --------->YAB1          ---------->DOF2      --------->YAB1                  --------->MYB46(3)--  --------->AHL20(2) <---------At4g35610        --------->ICU4                 --------->MYB52(1) --- ---->ANAC58   --------->AHL20(2)             --------->YAB1       <---------YAB1<------------AtMYB77 ---->ANAC46 <---------AHL20(2)              <---------YAB1     <---------ARR14(2)                <-- ---->ANAC58 --------->AHL20(2) ----------->GT1 <---------YAB1  --------->ARR14(2)  <---------MYB52(1)   acaaaaaaataataaaaaaatatagctcatcaaagagaaaataaactctgataattatgtaacacggttctgatattaatctaaccgttggggtttttca  9459700  Previous    Next  AGI:  At5g26880.1    Description:  tRNA/rRNA methyltransferase (SpoU) family protein. similar to unnamed protein product [Vitis vinifera] (GB:CAO15076.1); contains InterPro domain tRNA/rRNA methyltransferase, SpoU; (InterPro:IPR001537) Range:  from: 9457700    to: 9459233    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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