Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                          <---------HSFB2a(2)                                                                                        --------->HSFB2a(2)                                                                                    <---------ANAC58                                                                                    <---------ANAC58                                                                                   <---------HSFC1(2)                                                                                   --------->HSFC1(2)                                                                                   --------->HSFB2a(1)                                                                          --------->WOX13(1)                                                           --------->MYB52(1)--------->YAB1     --------->WOX13(1)                                  <---------MYB52(2) <---------ATHB12 ------->YAB1                         <---------YAB1    xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)   atcatatcaatctctgtagaaagtgtgtaatcttgttgttcttattggatttgtagagaactaacttatctagggccaatcacgatgcttctcgtagtaa  9450700                           <---------ANAC58                           <---------ANAC46                           <---------ANAC58                    <---------ANAC58                --------->ZAT14                  <---------YAB1        --------->GLK1(2)                  --------->ICU4       <---------GLK1(2)       --------->YAB1             <---------ANAC55(2)     --------->ANAC58         <---------YAB1             --------->ANAC58    <------ZmHOX2a(1) <-----------RAV1(1)                    <---------GLK1(2)             --------->ANAC58<---------MYB52(1)    <---------ZAT6           --------->MYB46(3)             --------->ANAC55(2)<----------ID1 <---------MYB52(1) <---------ICU4     <---------STY1(2)   --------->GLK1(2)<---------ANAC58 --------->ANAC58   ---------->ID1      ------------>CBF   tctagaatcagtagtaagtaatgcttgtttcgttaggacaagaatctctgttagtgttgtcgttataatcagtagagaaccaatgctatctagatttgta  9450800                                                                                             --------                                                                                             --------                                                                                         --------->At5g28300                                                                                         <------NtERF2                                                                        <---------ARR11(3) ----------                                                            --------->TOE1(3)          <---------DREB2C(2)                      --------->ANAC58                      <----------DOF2<----------DOF2--------->ALFIN1                      --------->ANAC58                      --------->TOE2(3)          <---------ANAC46                <----------DOF2                      --------->ZAT18   <---------ALFIN1<---------DEAR3(1)               --------->TOE2(3)                 --------->DAG2      ----------->RAV1(1)<---------MYB46(3)         <---------ICU4                         ---------->DOF2---------->DOF2    --------->MYB52(1) <---------GLK1(2)    --------->ANAC46        --------->ARR11(3)  --------->ANAC46<---------ICU4 ----   tcaaattctcttcattacctttaaacgcatcatcaaaacaaaatcgaagataaagttcacaactttaaaggccacatcttttactaatggcggtgaagca  9450900                          <<<<<<<<<MYB2                        <------MYB83                       <---------AtMYB61              ----------->HVH21                          ------>MYB83<---------O2              <------NtERF2          <---------LBD16     ------>MYB46(1)              <---------SPL7        --------->MYB52(1) --------->DEAR3(1)     <------------CBF   <----------DOF2     --------->MYB59               ------->TEIL    <---------bZIP60(1) ->ANAC58    --------->RAP2.6(2)--------->YAB1    <---------ATHB12   --------->bZIP60(1) ->ANAC58   <---------LBD16    <---------YAB1 ------------>CBF       --------->O2 >DOF2--------->MYB52(2)<------MYB46(1)--------->LBD16--------->MYB46(3)  <---------ZAT6 ----->MYB52(1)      <---------MYB52(1)----------->GT1--------->DEAR3(2)<---------ANAC46   aacggctttagttggccggaccggtttggttttctgataaccggaaaattcaatgaaccgactccaaaacgacgtcgtgttattgtgaaggcaaaatggt  9451000                     <------------CBF                                                             <<<                   <---------YAB1                                                                 >>>               <----------DOF2                                                                -------            ------>NtERF2                <------NtERF2                                        -------         --------->ZAT2                <---------DEAR3(1)                                  --------->LBD16         <---------ZAT2              <-----------HVH21                                    --------->HSFB2a(2)         --------->At4g35610     <---------ANAC58                                        <---------LBD16         <---------At4g35610     <---------ANAC58       <----------DOF2     <---------REM1(2) <------        <-----------RAV1(1) --------->ALFIN1    <---------YAB1            --------->ETT(2)<---------HSFB2a(2)   gttgttctctctgctgcctttaaaattggggttttgcttcgtcggggtttatgaagggctttgatactaatcttcgtctacaggcttcttctccagaatt  9451100                                                                     <----------DOF2                                                                 ------>ZmHOX2a(2)                                                                <------ZmHOX2a(2)                                                               <---------ARR11(3)                                                               <---------AGP1                                                               <---------ARR14(2)                                                               --------->ARR14(2)         <---------ANAC58                                      --------->ARR14(3)         <---------ANAC58                                      <---------GLK1(2)        --------->MYB52(2)                                     <---------ARR14(3)   <---------ATHB12                                            <-----------ARR10           --------->ARR11(3) <<<<<<<<<<<<<<LFY          <----------DOF2                    --------->ARR11(3)          <---------ARR11(3) >>>>>>>>>>>>>>LFY  ----------->GT1                            --------->AGP1 <---------ALFIN1 -->GLK1(1)        --------->DAG2                             <---------CCA1(2)        ---------->DOF2 -->ARR14(2)     ---------->DOF2                             ----------->ARR10--------->ANAC46 ---GLK1(1)  ----------------->AGL1                    <-----------GT1       --------->MYB46(3)   ctccaatggtttcttgcctaaaaggcaaaactttataaaactcaatcgcagaaattgttaccccagatcttctttctctcccaccatgttaaagctcttc  9451200                                                  <---------ARR14(2)                                                  <-----------ARR10                                                  --------->ARR14(2)                 <---------ZAT18                <---------MYB46(3)                 --------->ZAT18              <------NtERF2      ------>NtERF2                          <-----------HVH21      --------->LBD16                       <---------MYB46(3)--------->ZAT14     <---------ALFIN1             <--------P<---------DEAR3(1)<---------ZAT18     --------->DEAR3(1)          <---------MYB52(1)           <---------ZAT14                       <     --------->ANAC46           --------->LBD16 <---------DEAR3(2)  >>>>>>>>>>>>>>>>>LFY           <-   ------>ZmHOX2a(1)          <---------LBD16<---------SPL7  --------->ALFIN1 ---------->DOF2 <------   acttcctccgcctctcgagtccaccatttgactccggtaagtagggtcgtcgggtcttctccagtggagtctccattgttcaaagcgttgagtcaaatca  9451300                                                                                --------->At4g35610                                                                            ----------->HVH21                                                                          <---------At4g35610                                                                          --------->At4g35610                                                                          <-------GAMYB                                                                          ----------->RAV1(2)                                                                          <------NtERF2                                                                         <---------ATERF1(1)                                                                         <---------ERF1                                                                         ------>NtERF2                                                                         <---------RAP2.3(1)                                                                         <---------MYB46(3)                                                                         <---------DEAR3(2)                                                                        <---------ANAC46                                                                        <---------RAP2.3(2)                                                                        --------->ATERF1(2)                                                                        <---------RAP2.6(2)                                                                        <---------DEAR3(1)                                                                        <---------ATERF1(2)                                                                        <---------RAP2.3(3)                                                                       --------->DREB2C(1)                                                                       <---------DREB2C(1)                                                                       <------NtERF2                                                                       --------->RAP2.3(1)                                                                       --------->ATERF1(1)                                                                       <---------At4g35610                                                                      <---------ORA47(2)                                                                      <---------RAP2.3(1)                                                                      <---------RAP2.6(1)                                                                      ------>NtERF2                                                                      <---------ATERF1(1)                                                                      <---------RRTF1(1)                                                                      <---------ERF1                                                                      <---------DEAR4(2)                                                                     --------->ALFIN1                                                                     <---------DEAR3(1)                                                                     <---------DREB2C(2)         ----                                                                     <---------ATERF1(2)        -----                              ----------------------->TaNAC69(2)     <---------RRTF1(3)        <-----                             <---------WRKY12                        <---------RRTF1(2)        ------                             <---------WRKY38(1)                     <---------RAP2.3(2)       <-----                          <------MYB83                  ------>MYB46(1)--------->DEAR4(2)     <------              <------ZmHOX2a(2)                         -------->P   --------->ATERF1(2)      <------             <---------ARR14(2)                 <----------CDC5      <---------RAP2.6(2)     --------      --------->ARR14(2)  <------MYB46(1)    <---------ZAT14         <---------RAP2.3(3)     <-------     <---------ARR14(2)  --------->MYB55(2)  --------->ZAT14        <---------ABI4(1)        <------- ---------ANAC46         <---------MYB46(3)  <---------At4g35610  --------->ALFIN1       ---------->DOF2 --------MYB46(3)      <---------MYB52(1) <---------At4g35610<---------ATHB12   <---------At4g35610 ---ATHB12   --------->ARR14(2)      <----------DOF2    ------>MYB83--------->ATERF1(1)<---------MYB52(2)   ctgggtggaatcggcgatctacttcgttgggtcatcgtgctttcttctgctctgagcctaccaatggagaggcggcggctgaagctgaaactaaggcggt  9451400      --------->GLK1(2)     <---------GLK1(2)     <---------ARR14(2)                                  --------->STY1(1) ----->ZAT14                                             <---------STY1(1) ---->ALFIN1                                          --------->ZAT6 --GAMYB                           <---------DEAR3(1)-------->P --->ATERF1(1)             <---------ARR11(1)      --------->AtMYB61 -NtERF2                   <-----------ARR10      <---------MYB52(2) ---ORA47(2)               --------->ARR14(2)  --------->ZAT18 ---MYB46(3)               <---------ARR14(2)  <---------ZAT18             <-----------GT1      <---- ->ALFIN1 <---------ZAT14  <---------ARR11(3)--------->ZAT18               --------->MYB52(1)   <---- --DREB2C(2)               --------->ARR11(3)<---------ZAT18          ----------->GT1          <----- --DEAR3(1)               <---------CCA1(2)  --------->PCF2       <---------YAB1               <-----   ggagtccgattctgaagtgtctgactccaaatcttcgtctgcgattgtgcccactaaccctaggcctgaagattgtttaacggtttgtgtaactatggct  9451500                              --------->ZAT18          <-------GAMYB      <----------DOF2         <---------ZAT18         <---------MYB46(3)                            <  ---------->ID1    --------->ARR14(2)                =============================HOX2a_HOX2a      < ------DOF2         --------->ARR11(3)                --------->ATHB12      <------ZmHOX2a(1)       - -----DAG2          <---------ARR11(3)                ------>ZmHOX2a(2)   ----------->GT1           - ----ANAC58         <---------ARR14(2)        --------->ATHB12   <---------YAB1                     - ----ANAC58        <---------HSFB2a(1)--------->ARR14(2)     --------->WOX13(1)                    --   ttttgttcctttctctgtggaagatttgttagtgcatttgtatatgcgttattggatcgttggcaatctaattgtataggaaaatttcaattcttgttgg  9451600  Previous    Next  AGI:  At5g26850.1    Description:  binding. similar to cyclin-related [Arabidopsis thaliana] (TAIR:AT2G41830.1); similar to hypothetical protein OsJ_010154 [Oryza sativa (japonica cultivar-group)] (GB:EAZ26671.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN82509.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO17427.1); contains InterPro domain Armadillo-type fold; (InterPro:IPR016024) Range:  from: 9445443    to: 9450822    Orientation: Forward Links:  TAIR  MIPS    AGI:  At5g26860.1    Description:  LON_ARA_ARA (Lon protease homolog gene); ATP binding / ATP-dependent peptidase/ serine-type peptidase. Identical to Lon protease homolog 2, mitochondrial precursor [Arabidopsis Thaliana] (GB:P93655;GB:O04954;GB:Q8RWX1); similar to Lon protease, putative [Arabidopsis thaliana] (TAIR:AT3G05790.1); similar to Lon protease, putative [Arabidopsis thaliana] (TAIR:AT3G05780.1); similar to putative ATP-dependent proteinase LON2 [Oryza sativa (japonica cultivar-group)] (GB:BAD30304.1); similar to hypothetical protein OsI_026449 [Oryza sativa (indica cultivar-group)] (GB:EAZ05217.1); similar to putative LON3 protease [Oryza sativa (indica cultivar-gro Range:  from: 9451051    to: 9457003    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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