Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                    ----------->GT1                                                  --------->AtLEC2                                             --------->ANAC46                                          --------->ARR14(2)                                          <---------ARR14(2)                                    --------->ANAC58                                            <----                                    --------->ANAC58                                            -----         <----------ID1             --------->ANAC46                                        --------- --------->ANAC58             <---------YAB1--------->MYB46(3)                              <-------- --------->ANAC58      <------ZmHOX2a(1) <---------CCA1(2)   <<<<<<<<<<<<<<<<<LFY   --------->GLK1(1)   cacaaacaattggaacaaatccaaaggatgtcatcaataagccatatccaccatgtaaaatgtatacaatggaataactaaaacacaaatccaaaaaatt  9445000        --------->AHL20(2)       --------->AHL20(2)   --------->AHL20(2) <----------DOF2 --------->TOE1(3) --------->TOE2(3)             ----------->GT1 -----AHL20(2)                <---------TOE2(3)                      ------->TEIL               <---- ---->AHL20(2)            --------->GLK1(2)                         <---------CCA1(2)     --------->YAB1 >AHL20(2)               <---------GLK1(2)               --------->CCA1(2)           <---------DAG2 -AHL20(2)         --------->ATHB12                   <---------TOE2(3)              <----------DOF2   aaactttaaataaaaaaaaactgattagaatctaggttaaaatttagtttttgatcaaggtatgaagaatgtatctcttcttcacaactttatcatcttc  9445100                                                 --------->CCA1(2)                                                <---------ARR14(2)                                                --------->ARR14(2)                    ---------->DOF2             --------->ARR11(1)           <---------AHL20(2)                   --------->ARR11(3)           --------->AHL20(2)                --------------->AGL15                       --------->TOE1(3)    <------ZmHOX2a(2)                       <-----------------AG                         <---------MYB59   <---------ARR11(3) ----------->GT1     <-----------GT1                         <---------ZAT14  <- -----ANAC46<-----------GT1      ---------->DOF2<---------ARR11(3)     <----------DOF2   --------->TOE2(3)   gtatagatcacatttaaactttcaaagtaaaaacataaagaaatttacaagatttggataacttcgaagccaacttttaatgagttcagaacctaaaaat  9445200                 ------>MYB46(1)                 ------>MYB83               ------->GAMYB             --------->ANAC58             --------->ANAC58            ------->GAMYB           --------->MYB46(3)           <---------MYB111(2)                                                                -------           <---------MYB55(2)                                       <xxxxxxxxxxxxxxxxsmallRNA(i)    <      <------ZmHOX2a(1)                                        --------->HSFB2a(2)            ------- --------ANAC46<---------MYB59     <xxxxxxxxxxxxxxxxsmallRNA(i)<---------HSFB2a(2)            -------   tgtgggaaggacaacaaccaaattgttagcctttggacattaatcgatggagcatcgattagcctctggacattaatcgatggagcattctgacacaaga  9445300                                                                        <-------MYC2                                                                        <-------PIF4                                                                        <-------MYC3                                                                        ------->PIF4                                                                        ------->MYC3                                                                        ------->MYC2                                                                        <-------MYC4                                                                        ------->PIF5                                                                        <-------PIF5                                                                        ------->MYC4                                                                       --------->O2                                                                       --------->TGA1a                                                                       <---------TGA1a                                                                       --------->ANAC55(2)                                                                       <---------ANAC58                                                                       <---------ANAC55(2)                                                                      ------------>OsbHLH66                                                                  --------->At4g35610                                                                  <---------At4g35610                                                                --------->bZIP60(1)                                                                <---------bZIP60(1)                                                             ----------->HVH21                                                            <-----------HVH21                                                        --------->ARR11(3)                                      ===========================================bZIP_DOF                   <----------DOF2    ---------->DOF2--------->AHL20(2)<---------O2 -->ANAC58         <---------DAG2---------->DOF2     <---------AHL20(2)<---------ANAC58 ------ZmHOX2a(1)  <---------------AGL15----------->GT1 --------->GLK1(2)                          <- -->ANAC58   --------->ARR14(2)  ================================================bZIP_DOF     ------- -->ANAC46 ----------->ARR10<---------ZAT6        --------->TOE2(3) ----------->HVH21      <---------CCA1(2)   caggactatagcctagttctgctttttctagtgagaaaagaaaagaaaaaaacattaaaatctgtgacatctcacgtgctctctctctctcttctatctc  9445400                                <-----------GT1                            <----------DOF2                            <---------DAG2                          <------NtERF2                         ------>NtERF2                        --------->ANAC58                        --------->ANAC46                        --------->ANAC58                       <-------MYC3                       ------->MYC3                       <-------PIF5                       ------->PIF5                       <-------MYC2                       ------->MYC2                      --------->ANAC58                      --------->ANAC58                     <---------HSFB2a(2)                      --------->ANAC46                     --------->HSFB2a(2)                 --------->ARR14(2)                    <----------DOF2                       <-------                 <-----------ARR10                <---------DAG2       <---------GLK1(2)     -------- -----------CBF  <---------ARR14(2)               <----------DOF2   --------->YAB1    <---------GLK1(2) -->ZAT6  <---------CCA1(2)<---------DAG2  *TSS<---------ALFIN1  --------->WOX13(1)   --------->ARR14(2)   taattgtagtttgtatccaaatccacgcgcctttttccactctctgtctccacttttctttctagattaatcaaattctttgaaaccagtttctcacttc  9445500                   ------>ZmHOX2a(1)               <-----------HVH21             <-------TEIL             ------>ZmHOX2a(2)             =============HOX2a_HOX2a            <------ZmHOX2a(2)                                             <---------ANAC58            ==============HOX2a_HOX2a                                     <---------ANAC58           --------->ARR14(2)                                           --------->GLK1(2)           <---------GLK1(2)                                      <---------HSFB2a(2)           --------->AGP1 <---------AGP1                          --------->HSFB2a(2) --O2      <---------ARR14(2)                                 --------->ARR14(2)      --------->ZAT14 ->O2     <---------At4g35610   ------->TEIL        ------>ZmHOX2a(1)  <---------GLK1(2)   gcctctctcttcagatccgtcctctgtagctctgtatgtctcttctaatctctcctctcttacggtttctcgagattcttgtgttctgtttactcaatta  9445600                                                     <-------TEIL                          <---------TOE1(3)      --------->DAG2                       <<<<<<<<<MYB98            --------->ANAC58                 --------->AHL20(2)              --------->ANAC58                 <---------AHL20(2)             --------->SPL7              ------>ZmHOX2a(1)                 --------->AHL20(1)     <---------GLK1(1)           ===============HOX2a_HOX2a          <---------At4g35610       --------->HSFB2a(2)             ------>ZmHOX2a(2)          --------->At4g35610       <---------HSFB2a(2)           <---------ARR11(3)             <---         <---------TOE2(3)<---------TOE2(3)    <--------P         --------->ARR11(3)  ---------->DOF2   ccttggaaattaagctaaattttttgttagggtttgttttagaaatcgggtaaggcacatttgtgtttgatcttgttcctctgtctccaaaagcattgat  9445700                       <---------YAB1                      <---------TOE2(3)               <------MYB83               <------MYB46(1)              --------->MYB59             <---------MYB55(1)            <---------MYB52(1)  --------->TOE1(3)          <---------ANAC46      --------->TOE2(3)          <---------ANAC58    ------->TEIL                 --------->DAG2                          -- ----TEIL <---------ANAC58--------------->AtSPL8          ---------->DOF2                   <--------   tcatacccagtttcgttaggttttgatgtttgaaccttaacatttgaattttgaatttcaaaaagtatagatgaggtctggtttctaagttcccccactc  9445800               --------------->AtSPL8               <---------------AtSPL8       <---------ICU4       --------->ATHB12                           <----------DOF2      <---------ATHB12     <----------DOF2        <---------DAG2      --------->ICU4 <---------DAG2            <-----------GT1 <---------TOE1(3)      <---------YAB1 <----------DOF2<---------ANAC58      <----------DOF2 -------->DOF2 --------------->AtSPL3       ----------->GT1    <---------TOE2(3)    <----------DOF2 -ALFIN1   <---------AHL20(2)       <---------ANAC58    ---------->ID1              <---------DAG2<--   agaaagtaatgatttttttggtacttttcctttgtttgtcttggtttagtaactttttgtcttttagggtttacaaaagattgaagctttatgttctctt  9445900  Previous    Next  AGI:  At5g26848.1    Description:  unknown protein Range:  from: 9445122    to: 9445370    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g26850.1    Description:  binding. similar to cyclin-related [Arabidopsis thaliana] (TAIR:AT2G41830.1); similar to hypothetical protein OsJ_010154 [Oryza sativa (japonica cultivar-group)] (GB:EAZ26671.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN82509.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO17427.1); contains InterPro domain Armadillo-type fold; (InterPro:IPR016024) Range:  from: 9445443    to: 9450822    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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