Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                  <---------DAG2                      <----------DOF2                                <----------DOF2                    <---------DAG2                        --------->YAB1   <----------DOF2        <-----------GT1                     <----------DOF2     <---------DAG2--------->AHL20(2)          <-----------HVH21 ---->GT1        <<<<<<<<<<GT-3b------>ZmHOX2a(1)  --------->AHL20(2)  <-----------GT1   aaacagttaacccaagtatttttcttttataatcctttttgaactttatgacataaaatatatgtttcaccttttacatctcatttgtcacatagattta  9291500                                                                    <---------AHL20(2)                                                                   <---------AHL20(2)                                                                   --------->AHL20(2)                                                               <---------AHL20(2)                                                               <---------AHL20(1)                                                               --------->AHL20(2)                                                               --------->AHL20(1)                                                              --------->AHL20(2)                                                            --------->TOE2(3)                             <---------DAG2               ------>MYB83                             <----------DOF2             ----------->RAV1(1)                      <---------AHL20(2) --------->TOE2(3)------>MYB46(1)                    <---------YAB1 <----------DOF2   --------->REM1(1)                 <---------ATHB12                   <---------AHL20(2)  <---------TOE2(3)--------->AtMYB61     --------->AHL20(2)                 <---------YAB1   --------->TOE2(3)  --------->ANAC46      --------->TOE2(3)   ------   tcttacaaacttgcaatctattattttaaaacttttcctttaacattatacatctacaccaacattaaattaaatattcttaaaatacaatcactaatct  9291600    ------>MYB83    --------->MYB52(1)                                                     <---------AHL20(2)    ------>MYB46(1)                                                      <----------DOF2  <---------MYB46(2)                                                 <----------DOF2  <---------MYB59                                              <---------RVE1(1)                    < --------->ANAC46     <----------DOF2   <-----------GT1       <---------ARR11(3)                    - --->TOE2(3)<-----------GT1   <----------DOF2                 --------->ARR11(3)                    -   tataccaaactgtttttcaatattcttttctcctttgatatataacaaaatactaaaattcaacgatatttctttctttatttgctattgcaaaccagaa  9291700                                                  -------->ATHB1                      --------->TOE2(3)                                                  --------->YAB1                     ----------->GT1           ------>ZmHOX2a(1)                      <---------ICU4                   --------->YAB1           <----------DOF2<-----------GT1         --------->ATHB12                 <---------ICU4       ------->TEIL     <---------AHL20(2)       <---------YAB1                   --------->ICU4    --------->ANAC55(2)--------->YAB1            --------->ICU4                 --------->YAB1 ---------DAG2  <---------ETT(1)                 <---------ATHB12              <---------AHL20(2) -------->TOE2(3)<---------RAP2.6(3)        --------->YAB1           ----------->GT1<---------TOE2(3) -------->TOE1(3)------>NtERF2        <-----------GT1      --------->MYB59 --------->AHL20(2)       <   aaccttatgtatcctttgccgacaattttaacaaactaattaacaattgtaatcattgaattgggtaagacttgtgaataaataataatgttaaacaaaa  9291800                                      --------->AHL20(1)                                      <---------AHL20(2)                                      --------->AHL20(2)                                     <---------ATHB51                                <---------YAB1                          --------->AHL20(2)                          <---------AHL20(1)                          --------->AHL20(1)                          <---------AHL20(2)                         --------->AHL20(2)                <---------AHL20(2)   --------->ICU4                --------->AHL20(1)   <---------AHL20(2)                --------->AHL20(2)   --------->AHL20(2)           --------->AHL20(2)--------->ICU4            --------->ZAT14                           ----   --------->KAN4(2)     <---------AHL20(2)            --------->ZAT18                       --------  --------->KAN4(1)  <---------AHL20(2)                <---------ZAT14                      ---------  <---------KAN4(1)  --------->AHL20(2)     <---------TOE1(3)              ------->TEIL     --------- ---------GLK1(2)    --------->AHL20(1)     <---------TOE2(3)     <------------CBF        <---------ALFIN1   tagattattccaaaaaaataaaataaaataaattatgaaataatttagggtttgaagttcacaggctgtattggatggacgttgaatcgattccacctca  9291900                                       *TSS<-----------GT1                         --------->DAG2   <---------AHL20(2)                  <----------DOF2                            ---------->DOF2 ----->At4g35610                 <---------ICU4                       <---------ANAC58             <- ->AtMYB61                <---------AHL20(2)             <----------DOF2       --------->YAB1 <------ >ANAC46                  --------->AHL20(2)<-----------GT1           <---------ANAC58--------->ARR11(3) >bZIP60(2)   --------->ANAC46  <---------ATHB12    --------->At4g35610<----------DOF2<---------ARR11(3)   tctaaataatctcttcacaaaaccaaaattaaaaatcattcctttttaacaatcttctgcattttcgaacttgctttgctgtgataaagttctctccttt  9292000                                                                <---------MYB52(1)                                                       <----------DOF2                              <    ---------->DOF2                              <---------ARR14(2)                            <----- ---------DOF2       <----------DOF2             --------->ARR14(2)  --------->YAB1       <---------- ----DOF2   >>>>>>>>>TBF1                    --------->ANAC46  --------->LBD16 <-----------GT1 <-----   cctttctaaaggaagaagaaaggctttatctctcaaaaccctcatccacaaaatcccctttaatccgctaatcagagggtttttctgtttttgtgttgct  9292100                                                                            ------->TEIL                                                         =======================HOX2a_HOX2a                                                         ------>ZmHOX2a(1)  <---------ARR14(2)        --------->At5g28300                        <---------AHL20(2)       --------->ARR14(2)        <-------GAMYB                             --------->AHL20(2)        <---------ARR11(1)       ----------->GT1                          ------->TEIL               <---------ARR14(1)      <---------TOE2(3)                      --------->ANAC58              <---------CCA1(2) ---------MYB52(1)                      <---------------AtSPL8  <---------ANAC58                  --- ----ANAC58                    <---------YAB1--------->ANAC58   <---------ANAC46               ------ -RAV1(1)                   <----------DOF2 <-------TEIL--------->TOE2(3)------>ZmHOX2a(2)    <------ ----ANAC58                <---------DAG2 --------->TOE1(2)     <---------ANAC58   <---------GLK1(2)   tcgttactacggttacattcttctcttccccttttgatttcaaaggtacgaattttatcctcaattgcgtttcgatcgtatctcaaattctcttcgatct  9292200                                        <---------ANAC58                                        <---------ANAC46    ---------->DOF2                     <---------ANAC58 -------->HVH21                        <-------TEIL              xxxxxxxxxxxxxxxxxx>smallRNA(si3) >ZmHOX2a(2)    --------->TOE2(3)   <---------ANAC58             <-----------GT1               ------ ---GLK1(1)     <----------DOF2     <---------ANAC58        <---------ANAC46                   ------   ctgacagaaagtttccaactttagtgaatcgcgaaattgggttcgtgttcttgctctgatttcggtgtaacccttcaatttcagaaccctcttgatacct  9292300                                                                        ------>ZmHOX2a(2)                                                                       <------ZmHOX2a(2)                               <-------TEIL              ---------->ID1<---------GLK1(1)                               ------>ZmHOX2a(2)        <-------GAMYB  --------->GLK1(1)                              <------ZmHOX2a(2)        <---------MYB46(3)                             --------->AGP1            --------->MYB52(2)  <----------DOF2                             <---------GLK1(2) <---------HSFC1(1)     <---------ARR11(3)                             <---------ARR14(2)<---------HSFB2a(2)    --------->ARR11(3)      <------ --->TOE1(3)                 --------->ARR14(2)--------->HSFB2a(2)    <---------AGP1         <------- --->TOE2(3)           <---------REM1(2)   <----------DOF2        ---------->DOF2            <-------   taagaagaggcaatttgaagttttcttcacagatccgtcttagctctttctagaggtttgttgtataccaaagatctctttttttttttgcatttgcttt  9292400  Previous    Next  AGI:  At5g26740.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G05940.1); similar to unknown [Populus trichocarpa] (GB:ABK95399.1); contains InterPro domain Protein of unknown function DUF300 (InterPro:IPR005178) Range:  from: 9291939    to: 9294611    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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