Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                 --------->ZAT18                               --------->ZAT14                               <---------ZAT14                               <---------ZAT18                             <---------ZAT18                            <---------ANAC58                            <---------ANAC58                            <---------ANAC46                          <---------ANAC58                          <---------ANAC46                             <---------ANAC55(2)                          <---------ANAC58                             <---------ANAC46 ------ICU4              <---------AtMYB61                             <---------ANAC58         ----- ----->YAB1              --------->ALFIN1         --------->ATHB12     <---------ANAC58         ----- ---->ICU4             --------->ALFIN1 <-------GAMYB                  ----------->GT1--------->DAG2 -->YAB1           <------ZmHOX2a(1)   <------MYB83 <---------WOX13(1)<-----------------------TaNAC69(2) --YAB1          <---------TOE2(3)     <------MYB46(1)       <----------DOF2         ---------->DOF2   gatgtctcggtagattgtttaggatgtgtggtgtgcacatttggttgagagttgattgatagtctttctggtttcgtgaatcgaacaaaaagcaggttaa  9305100                                                                        <---------ANAC58                                                                        <---------ANAC58                                                                   ----------->GT1   --------->ARR11(3)                                          --------->ARR14(2) ----------->HVH21                                             --------->ARR11(3)  ------>ZmHOX2a(1) ---->ANAC58                           --------->GLK1(1)       --------->GLK1(2)   <---------MYB52(1) ---->ANAC58          <---------PCF5   <---------GLK1(1)       <---------ARR14(2) --------->TOE2(3)   gcaatgaccttgtccaaagaagagggaccatttagcattggatttcagtggtattgctaaatgagtatctggttacttcccattccttagttctattggc  9305200                                           <---------ARR11(3)                         ------>ZmHOX2a(1) --------->ARR11(3)        <----------DOF2         --------                        --------------->AGL15            --------->ARR11(3)             <---------ANAC58                       ----------------->AGL1            <---------ARR11(3) <----------DOF2  <-------      <-----------GT1 <-----------GT1     <---------RVE1(1)         <---------DAG2      <---------ANAC58   acagtgtttatctgtttcgattttttcctatatgagtctatgagagattttagttcaaagatttgtattgccttttagcttttctgaattgcctctgcat  9305300 --------->GLK1(1) <---------ZAT2 <---------GLK1(1)                                                                             ------ --------->ZAT2                                                                  <---------TOE2(3) --------->At4g35610                                            --------->ANAC55(2)            <----- <---------At4g35610                <---------ZAT14             <---------ANAC55(2)--------->YAB1 ->ZAT14                  ---------->DOF2                   <-----------HVH21  --------->TOE2(2) --ZAT14      --------->ARR14(2)    --------->ZAT14        --------->ANAC46    --------->TOE1(2)   tggagctcccatgaagtattctctcttgaaaagagaactgcagagacactgatacagaaaccagtcacataactcatataaccaaggatagttttagtat  9305400                                                                                        <---------WOX13(1)                                                                                       <------------CBF                                 <-----------GT1                                      --------->ATHB12                 <---------------AtSPL8 <---------ICU4                               --------->ICU4   <---------GLK1(2)      ------------>CBF <-----------GT1                           <---------YAB1 <---------YAB1  --------------->AtSPL8--------->ICU4                              ---------->DOF2 --->ZAT14      <---------ANAC46--------->AHL20(2)          ----------->GT1--------->ZAT6      <----- ----ZAT14   <---------ATHB12  --------->AHL20(2)          <-----------------------TaNAC69(2)  <-----   agtatgattctccaaatgatgtgtacataccaatttaactacttattactctaatccaagttgagttaaaaaaaaaaacactatgtaaagattgatactt  9305500                                         ----------->GT1                                      <---------ALFIN1                                      ----------->RAV1(1)                                     --------->DEAR3(1)                                     --------->RAP2.3(3)                                    <------NtERF2                                   <---------ATERF1(1)                                   ------>NtERF2  ----------->GT1                                  --------->RAP2.3(3)                                  --------->RAP2.3(2)                                  --------->DEAR3(1)                                  --------->RAP2.6(2)                                 --------->ERF1  --------->DAG2                  --------->ANAC58                                 --------->DEAR4(2)                      --------->ANAC58                                 --------->MYB46(3)                      --------->ANAC58                                 --------->ATERF1(1)              ------>ZmHOX2a(1)                                 --------->RAP2.3(1)             --------->TOE2(3)     ------->GAMYB                                 <------NtERF2  ---------->DOF2  --------->TOE2(2)    --------->MYB46(3)                                 --------->DEAR3(2)              --------->TOE1(2)<---------ATHB12                                 --------->ORA47(2)             --------->YAB1   --------->ANAC58                --------->DAG2  <---------RAP2.3(1)          ------>MYB83--------->ANAC46                *TSS            <---------ATERF1(1)          ------>MYB46(1)     --------->ANAC46 ----DAG2<------------CBF       <---------At4g35610        --------->TOE2(3)  --------->MYB46(3) -----DOF2     ---------->DOF2  --------->At4g35610        <---------MYB59  --------->ARR14(2)   ----   tatggactaaaaattgaaaaagttgacaacttggagccgcccacagttaaaaaagtaaaaacctaatcctaagacccgaaaccactcaaccaaaaaacta  9305600                                                                                                   <-                                                                                                  ---                                                                                                -----                                                                                           <---------ANAC58                           ----------->RAV1(1)                   <------ZmHOX2a(2)         <---------ANAC58            <---------CCA1(2)    <---------ZAT18                --------->AGP1          <----------DOF2 ------------------->TaNAC69(2)  --------->ZAT14  <---------CCA1(2) ---------->DOF2  ------->TEIL<---   gggttctgtttctcgtctctctctcaaacccacattgcacaatccatttctcgtttctctgatttagatccaaagatggatgggatgaagctttcgttcc  9305700                                                                                     ------->GAMYB                                                                                     --------->DEAR3(1)                                                                                    --------->MYB46(3)                                                                                  ------->GAMYB                                                                                 <---------MYB111(2)                                                                                 <---------MYB55(2)                                                                                 --------->MYB46(3)                                                                          ------>NtERF2                                                            <---------WOX13(1) ----------->RAV1(1)                                                         <---------YAB1   --------->At4g35610                                                      ----------->HVH21  <---------DEAR3(1)            <---------ALFIN1                          ----------->TGA1   --------->RAP2.3(2)        <---------ZAT18                             --------->At4g35610  --------->DEAR3(1)        --------->ZAT18                             <---------At4g35610 --------->RAP2.3(1)   ---------->DOF2                                  --------->LBD16    <---------At4g35610 --------->LBD16                             <---------GLK1(2)         ------>NtERF2<------------AtMYB77 --------LBD16           <---------ICU4     --------->At4g35610        --------->LBD16 ------>MYB52(1)        <---------YAB1      <---------ZAT2--------->ATHB12<---------At4g35610 <------ ---->MYB46(3)        --------->YAB1        <---------At4g35610<---------GLK1(2) <---------MYB52(2)-- ------ALFIN1  <----------DOF2   <----------DOF2  <---------LBD16     --------->ANAC46<-----------HVH21   caccggaaagtccaccactttcagtcatcgttgctctttctctctcagcttctccggtgacgattgattcttccgccgctgcaacaaccgtcccttcttt  9305800                      <---------MYB52(1)                                                      <------ZmHOX2a(1)                    <---------ANAC58                                              --------------->AGL15          <---------MYB46(3)                                                     <---------ANAC58       ------>NtERF2<---------ANAC58                                             <---------ANAC58      --------->DEAR3(1)                                                       <---------AHL20(2)      ----------->HVH21                                            --------->TOE2(3)       <------ZmHOX2a(1) ----DOF2<---------ANAC46                             <---------YAB1<----------DOF2   <---------REM1(1) -------->ID1   <----------DOF2            <----------DOF2      <-----------GT1--------->ARR11(3)   tgtcttctccgacgggtactttccgttttcttagtctggttccttctttgatttctatgaaagtttaaacctttttgttaatttcttgatgtaggaggaa  9305900                  <<<<<<<<<TBF1              <---------MYB52(1)           <------NtERF2                --------->At4g35610          ------>NtERF2              ========================HOX2a_HOX2a         --------->DEAR3(1)          <------ZmHOX2a(2)   --------->GLK1(1)         <---------ALFIN1      <------MYB46(1)  <---------HSFC1(2)        --------->MYB46(3)     <------MYB83  ---------->DOF2        --------->ATERF1(1)    <---------MYB46(3)     ------>ZmHOX2a(1)       <---------YAB1        <---------ABI4(2)     <---------AtMYB61 --------->HSFC1(2)         <----------DOF2       <---       <---------ATERF1(1) <-----------RAV1(1)--------->DAG2       ----------->RAV1(1)   <---------TOE1(2)   attgaatggagccaccgttcttcttcgctatgttggtcgatcagcgaaaaagcttcctgatttctatggcaacaatgcttttgattcttctcaggtctcg  9306000  Previous    Next  AGI:  At5g26710.1    Description:  glutamate-tRNA ligase, putative / glutamyl-tRNA synthetase, putatuve / GluRS, putative. similar to OVA9 (OVULE ABORTION 9), glutamine-tRNA ligase [Arabidopsis thaliana] (TAIR:AT1G25350.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN76587.1); similar to predicted protein [Physcomitrella patens subsp. patens] (GB:EDQ74088.1); similar to hypothetical protein OsI_032170 [Oryza sativa (indica cultivar-group)] (GB:EAY78211.1); contains InterPro domain Aminoacyl-tRNA synthetase, class I, conserved site; (InterPro:IPR001412); contains InterPro domain Glutamyl/glutaminyl-tRNA synthetase, class Ic; (InterPro:IPR000924); contains InterPro d Range:  from: 9305516    to: 9308443    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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