Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                  --------->AHL20(1)                                                <---------AHL20(1)                   --------->YAB1             <---------AHL20(1)                        <-----------HVH21                   -------->ATHB1             --------->AHL20(1)                    <---------At4g35610                   <--------HAHB4      <---------AHL20(2)                         <---------WRKY38(1)                   -------->HAHB4   --------->AHL20(1)                            <---------WRKY12                   --------->ATHB51--------->AHL20(2)                            <<<<<<<<<<WRKY11                   <---------AHL20(2)<---------YAB1                              <<<<<<<<<<WRKY6                   --------->ATHB12--------->YAB1                                --------->WRKY18(1)                   <---------ICU4  <---------AHL20(2)                           <-----------HVH21                  <---------YAB1   <---------ICU4                              <------MYB83                  <---------ATHB51 --------->ATHB51                           --------->MYB59            ----------->GT1        -------->ATHB1          --------------->AGL15<--------ZAP1       <---------YAB1<---------YAB1<--------HAHB4        ------->TEIL        --------->SPL7     --------->CCA1(2)            --------->ICU4--------->AHL20(2)          <---------MYB52(1)    --------->ARR11(3)       --------->YAB1   --------->ARR11(3)           <---------SPL7--------->WRKY18(1)    <---------ARR11(3)    --------->YAB1      <---------ARR11(3)---------->DOF2<------MYB46(1) ------>ANAC46    --------->ICU4  <---------ATHB51 <---------AHL20(2)     <---------MYB46(3)   acataagatatgtttggataattattagtaataacaattattttaaaaaatattttatgaaccagataaagaatagtcgttcggtcaactggtcatggat  9350400                           --------->ZAT6                  <---------ZAT14                  --------->At4g35610                                    --------->AtLEC2                  --------->ZAT14                          <-----------HVH21                     <---       <---------AHL20(2)--------->YAB1       <----------DOF2   --------->ARR11(3)            -------   aaaaactattttaaaaactcagcactataagactataagtctataagtctttttgaacaagtgtcagttcttgttatgcaaaattttggtattaagaagt  9350500                                   ---------->DOF2                          -------->ATHB1                          --------->ATHB51                          --------->AHL20(2)                         <---------YAB1        ---------->DOF2  --------->ICU4                                                         -----    --------->ANAC46     <---------ATHB51         <----------DOF2                        --------->ZAT14 --------GT1         ------------>CBF     <-----------GT1                    <-----------GT1   ------ ---->GT1           <------ZmHOX2a(1)  ----------->GT1                    ----------->GT1<---------ZAT18   aactatacccaaaagttaacaaggacaattattcagttaaagtgtaactatacttttcacaaacaaactaaaaaacttgtaactagattagtagactcct  9350600                                                                                            <--------                                                                                            ---------                                                                                           ----------                                                                                           <---------                                                            <----------DOF2                <---------                               --------->AHL20(2)          <---------ANAC58                ----------                               <---------AHL20(2)          <---------ANAC58                ----------                   <---------AHL20(2)                    <-----------GT1               <---------GLK1(1)                   --------->AHL20(2)                 <---------AHL20(2)               --------->GLK1(1)      ----------->GT1         --------->AHL20(2)     --------->AHL20(1)           --------->YAB1    ------>ZmHOX2a(1)  ----------->GT1               <---------AHL20(1)      ------------>CBF   -----   --------->TOE2(3) <------------CBF             ----------->TBP            ----------------->AGL1 ->ZmHOX2a(1)   --------->AHL20(2)                --------->AHL20(2)       <-----------GT1 ---------- --->TOE2(3)   --------->AHL20(2)   <-----------GT1 <---------AHL20(2)--------->YAB1<---------YAB1---   taattcctaagtaaaaaataaaaaattgaaaaaaaaatttacttctaaacatatatatatttctttccattatcgtattaccaattttgatatccctaaa  9350700                                                                 ----------->TBP                                                                 <---------AHL20(2)                                                         ------>ZmHOX2a(2)                                                        <------ZmHOX2a(2)                                                       <---------ARR14(2)          <---------AHL20(2)                           --------->AGP1        ----------->TBP                                <---------ARR14(3)   <---------YAB1                                      <---------GLK1(2) -------AGL15                                          --------->ARR11(3) ------>AGL15                                          --------->ARR14(2) ------->AG                                            <---------ARR11(3) --------AGL1                                          --------->ARR14(3) --------AG                                         --------->YAB1                               ---- ------->AGL1                                    --------->WOX13(1)  --------->DAG2              ---- ------->AGL2                                   --------->MYB46(3)  ---------->DOF2              ---- ----->DOF2                          <---------ANAC58 <---------CCA1(2)               ---------->DOF2 ----->AGL15                 --------->AHL20(2)------------>CBF----------->TBP      --------->YAB1 ------>DAG2   ----------->GT1       <---------ANAC58----------->ARR10            --------->AtLEC2   aaggtatgatatatatatggttgaactgagataaattttgcttaattccaacaatcagatcttctatataaaaagcacttctccattcaaaagtataaca  9350800                  <---------bZIP60(2)                  <---------bZIP60(1)                  --------->bZIP60(1)         --------->DAG2     ----------->GT1        ---------->DOF2    --------->DAG2                                                    <-------   --------->AHL20(2)     ---------->DOF2                                                    -------- ----->ANAC46  --------->ICU4                                                            ---------->DOF2 ----->ANAC58  ----------->HVH21           --------->YAB1     --------->ANAC58       ---------->DOF2 ----->ANAC58  ----------->TGA1         <----------DOF2       --------->ANAC58   ---------->DOF2<----   cacaaaaaaataaagtcatgacgagacagaaagtgaaaatgactttcatagaaaatgaaacagcaagaaaatcaacattcaagaaaagaaagaaaggtct  9350900                                              <---------At4g35610                                              --------->At4g35610                                           <----------DOF2           <---------At4g35610                                          ------>ZmHOX2a(2)          --------->ZAT2                                        <---------ARR11(3)       --------->SPL7                                        <-----------ARR10       <---------SPL1(1)                                   <------NtERF2               <---------SPL1(2)                                  <---------SPL7               <---------SPL7                                 <---------ANAC58             <---------ANAC58                                 <---------ANAC58  <---------ANAC46  --------->At4g35610                                 <---------bZIP60(1)          <---------ANAC58  <---------AtMYB61                                 --------->bZIP60(1)     --------->MYB46(3)   --------->LBD16       --------->At4g35610       <---------ANAC46  <---------bZIP60(1)      <---------LBD16    ---------->DOF2         <-----------RAV1(1)    <---------ETT(2)  <---------ZAT2  --------->ALFIN1 --ARR11(3)               <----------DOF2<------ZmHOX2a(2)   --------------->AtSPL3<---------REM1(1) ->ARR11(3)           --------->GLK1(1) <---------ARR14(2) ------------------>SPL14--------->ALFIN1 ------DOF2           <---------GLK1(1) --------->ARR14(2)------->GAMYB   ------->TEIL   tttgaagaaagctcaagagttgggaattctttgtggcgtcccgatctttgctgtcgtcaacagtccgtacgagctgaacccggaggtgtggccatcgaga  9351000                                                                                                   --             <---------AtMYB61             <---------WOX13(1)                                     ---             --------->ALFIN1        <---------DREB2C(2)                                    <------ZmHOX2a(1)         <-----------RAV1(2)         <---------DEAR4(1)                                 ------->GAMYB   <------NtERF2                     <---------DEAR3(1)                              ----------->RAV1(1)   <---------At4g35610               <---------At1g77200                      <----------DOF2 <------ZmHOX2a(2)   --------->At4g35610              --------->DDF1                         --------->ARR11(3)<------- <---------DEAR3(1)                <-----------HVH21                       <---------ARR11(3)--------   gaggctgcgaaccaggtggtgtcccaatggaagacgatgtcggtgatggacaagaccaagaagatggtgaaccaagagacctttctccaacagaggatca  9351100                                      ---------->DOF2       ------->GAMYB              <----------ID1     -------->P              ---------->DOF2    --------->MYB52(1)     --------->LBD16 --------->ANAC58         <---------ANAC46 --------->ANAC58         <---------ANAC55(2) --------->ANAC46         <---------ANAC58 -------->DOF2            <---------HSFB2a(2)                         <---------WOX13(1) ------>AtMYB61           <---------ANAC58       --------->At4g35610 >>>>>>>>>ARR2 --ARR11(3)              <---------LBD16         <---------At4g35610--------->ATHB12 ->ARR11(3)              <-----------------------TaNAC69(2)    <---------YAB1                    ----   ccaaagcaaccgagtcttggaagaagttgcggaaagagaacaaagagttggagatgaagaacattatgtttgattgtcttagtggcaaaactttggtttc  9351200                                 <---------TGA2(1)                           <---------TOE2(3)                                 --------->GLK1(2)                        --------->GLK1(2)                                   <---------ARR14(2)                       <---------ARR11(3)                             <---------ARR14(2)                       --------->ARR11(3)                            <------ZmHOX2a(1)                       <---------GLK1(2)                           <---------TOE2(2)               <---------ZAT2    <---------bZIP60(1)             --------->TOE1(2)               <---------At4g35610                       ----------->GT1------>ZmHOX2a(2)               --------->At4g35610                      <---------ARR11(3)  <---------GLK1(2)    ----               --------->ZAT2    --------->bZIP60(1)    --------->ARR11(3)  --------->ARR14(2)  -----   ----------->GT1  --------->HSFB2a(2)             ---------->DOF2<---------TOE1(2)           <----- ----->HSFB2a(2)    <---------HSFB2a(2)       --------->MYB46(3)--------->YAB1     ---------->DOF2   tagtatcgaaaaaactgagcttcgagattttggttatgtcattgaacaacaactcaaagatgttaatcgtaggatcgagattctgaaaaggaacaatgaa  9351300  Previous    Next  AGI:  At5g26630.1    Description:  MADS-box protein (AGL35). similar to AGL80/FEM111 (AGAMOUS-LIKE80), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT5G48670.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO17341.1); contains InterPro domain Transcription factor, MADS-box; (InterPro:IPR002100) Range:  from: 9350818    to: 9351474    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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