Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                      <       xxxxxxxxxxxxxxxx>smallRNA(i)                                                                 -       xxxxxxxxxxxxxxxx>smallRNA(s)   ----------->GT1                                               -    --------->ARR11(3)      <---------TOE2(3)           <---------RVE1(1)                         <--   <---------GLK1(1)     <----------DOF2     <-----------GT1                                      --- ----RVE1(1)          <---------ARR14(2)    --------->CCA1(1)   <----------DOF2                   <-- ----CCA1(1)          --------->ARR14(2)    --------->RVE1(1)  <---------ANAC58                   --- --->GLK1(1)         <---------MYB52(1) --------->AHL20(2)     <---------ANAC58                <----- -->ARR14(2)        --------->LBD16  --------->DAG2    <---------MYB52(1)              <---------MYB52(1) ---ARR14(2)      <---------LBD16   ---------->DOF2  <---------TOE2(3)                <-------GAMYB<-   ttttgaaatctcgcttctgttccggttctttaggtttaaaaagtaaatatccattcaggtattttgctttagacgtttttgatatttcggttattttgag  9374800                                         --------->AHL20(2)       <---------CCA1(1)                 <---------AHL20(2)       <---------RVE1(1)               <---------YAB1       --------->GLK1(1)              <---------AHL20(2)      --------->ARR14(2)              <---------AHL20(1)      <---------ARR14(2)         <---------AHL20(2)  <---------LBD16                <---------YAB1 ---------ARR14(2)              <---------AHL20(2) -------->KAN4(2)            --------->AHL20(1) -------->ARR14(2)           <---------AHL20(1) -------KAN4(2)              <---------ARR11(3)  <---------AHL20(2) ------->TaMYB80            <---------AHL20(2)  <---------AHL20(1) -------ARR14(2)        --------->AHL20(2)      --------->AHL20(1) ------>ARR14(2)        <---------AHL20(2) --------->AHL20(2) <----------DOF2 ----ANAC46<---------AHL20(2)--------->ARR11(3)<---------AHL20(2)  <---------YAB1            <------- ---------TaMYB80   <---------YAB1  <---------YAB1      <---------CCA1(2)      --------->AHL20(2)   tatattcggatattttttggttatttttaaatatttttattatttttatatatatttcaaatctctttgattattttgtctataaataactaatactttt  9374900                                 <---------AHL20(1)                                 --------->ARR11(3)                               --------->AHL20(1)                               <---------ARR11(3)                       <---------GLK1(1)                       --------->GLK1(1)                      --------->ARR14(2)                      <---------ARR11(3)                                                     --------                    ----------->ARR10                                                <---------ARR11(3)    <---------AHL20(2)<---------ARR14(2)                                             --------->ARR11(3)    <---------YAB1 <--------P  <---------AHL20(1)                                <---------AHL20(2)    --------->AHL20(2)--------->ARR11(3)                  <---------At5g28300   <---------AHL20(2) ---DOF2         <---------ANAC46--------->AHL20(1)      --------->YAB1         --------->AHL20(2)   ggatatataattgtagtttgggtagatatccaaaatattttggttcgatattgattcaattacagtttttttggttttagaatttaatatctattcggtg  9375000                                                                    <---------MYB52(1)                                                                  ----------->GT1                <------MYB46(1)                                <---------MYB52(1)                <------MYB83                                  <---------SPL7               --------->MYB59                               <---------ANAC58           <------MYB83                                   --------->GLK1(2)           <------MYB46(1)                               <---------ARR14(2)     --------->AHL20(2)                                  <---------GLK1(2)     <---------AHL20(2)                             <------MYB46(1)<-------GAMYB     <---------AHL20(1)                             <------MYB83  <------MYB46(1)  <---------AHL20(2)                    <---------YAB1<--------P--------->SPL7  --------->ZAT6      <  --------->AHL20(2)           <----------DOF2     --------->MYB59<------MYB83  --------->ANAC46   <- --->GT1  --------->MYB59  <---------GLK1(2)  <---------YAB1 <---------ANAC58<---------ZAT18 --------   atattaaaaaatttggttcggtttagttcgattctttttgttttgattctaatttggtagattccgttcggttaatttgtccacactaacatttccccaa  9375100                                          --------->At4g35610                                          <---------At4g35610    <---------MYB52(1)                 <---------ANAC58  <---------ZAT6               <---------HSFC1(2) ---------At5g28300            --------->HSFC1(2)                                     *TSS ----------GT1              ---------->DOF2                                   <---------MYB46(3) ---- ->LBD16           ------------>CBF    <---------ANAC58                     <------------CBF    <----   attactgttatttgttttgggcccaatcccaaaagcttcgggcctgctaacaaaatatagacccaaaaattcaacgtcgattgttgttcttctcgctctg  9375200                                  <---------HSFC1(2)                                  <---------At4g35610     <------ZmHOX2a(2)                                  --------->HSFC1(2)--------->TOE2(3)                               <--------P          <---------ICU4    --------->GLK1(2)        <---------ANAC55(2)   --------->ATHB12   <---------ARR14(2)       >>>>>>>GRF7            <--------HAHB4                            <-------   --------->ARR14(2)       --------->MYB59       <---------YAB1                             --------   <---------GLK1(2)       <-----------RAV1(2)    --------->ICU4                           ---------- ------->HVH21            <---------MYB52(1)    --------->YAB1                   <---------TOE2(3) -------HVH21            <-----------HVH21    <-----------GT1                  ---------->DOF2 ------   tgacagattctcgctctctctacaaactgtcaggtaagcttcttcaattttcatcattagatcaaatagtttccttcgcctcaaaggtttgtgtcgatct  9375300                        ------>ZmHOX2a(2)                                                    <------- --ARR14(2)--------->TOE2(3)                                                                --------- ->ARR14(2)--------->TOE1(3)           --------->At4g35610                         --------->TOE1(3) ->ARR10--------->GLK1(1) <---------ANAC46              ------>ZmHOX2a(2)          --------->TOE2(3) >ZmHOX2a(2)      <-----------GT1      <---------At4g35610           <----------DOF2       ----------   gcgattagagaaaccctaattttcgatctcgtagaaacttcagctagactagtagggatcgatttgaatcgctatatcgctgaaaccctaatttcgttaa  9375400                                                                          ---------->DOF2                                                                      <---------ANAC46                                                                      <---------ANAC58                                                                     <------NtERF2                                                                    <---------RAP2.6(3)                                                                    --------->LBD16                                              <---------REM1(1)     ------>NtERF2  --------->ANAC58               ------>NtERF2                 <---------TOE2(3)     --------->ATERF1(2)              ----------->HVH21           <---------WOX13(1)       <---------ATERF1(2)            --------->At4g35610         --------->ATHB12           <---------DEAR3(1)        <-----------RAV1(1)            <-------TEIL                --------->DEAR3(1)  --------->ANAC58 --MYB52(1) <---------At4g35610    --------->MYB59                <---------LBD16  --------->ANAC58 >TOE2(3)<-----------HVH21         <---------TOE2(3)     ----------->GT1----------->HVH21 ->GT1 <------------AtMYB77        <---------TOE1(3) <------ZmHOX2a(1)<---------ANAC58 --------->ANAC58   tttctcagaactgtcgctgacacagtacatagggttttaggttgattgatgtagaggaatggatattagccggcgtgaaagtaagacggaagcaagtagt  9375500                          --------->At4g35610                          ----------->GT1                       <------ZmHOX2a(2)                      --------->ARR11(3)                  ---------->DOF2           <-----------GT1                  <---------AtMYB61              <---------YAB1       <-----------GT1            --------->ARR11(3)                   --    --------->MYB52(1)<---------ARR11(3)  <-----------GT1     <---------ARR11(3)  <----------DOF2  <-   agagagaaacggatttatgagaaagatcaggtcaatttcacaattttctccattccatactcaagttcttatatgtgttttggtctttgtttcatcaatt  9375600                                                              <---------MYB46(3)                                                         --------->HSFC1(2)                                                         <---------HSFC1(2)                                                         <---------HSFB2a(1)                                                    <---------At4g35610                                                    <------NtERF2                                              <---------WOX13(1)     --------->WOX13(1)                                             --------->ARR14(2)<-------GAMYB -------->ID1                    <----------DOF2    --------->At4g35610<---------ATHB12 --------TOE2(3)       ------->TEIL<---------AHL20(2)  <------ZmHOX2a(1)         <---------ZAT6  ----   tgtggttttgaaattggtatagatgaatcaagagtcttttattgagggattggcagaggagtttcggttgccaattactcatagggttactgaaaatgtt  9375700  Previous    Next  AGI:  At5g26610.1    Description:  D111/G-patch domain-containing protein. similar to D111/G-patch domain-containing protein [Arabidopsis thaliana] (TAIR:AT2G42330.1); similar to D111/G-patch domain-containing protein [Arabidopsis thaliana] (TAIR:AT2G42330.2); similar to D111/G-patch domain-containing protein [Arabidopsis thaliana] (TAIR:AT1G17070.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO17343.1); contains InterPro domain Zinc finger, C2H2-like; (InterPro:IPR015880); contains InterPro domain Zinc finger, C2H2-type; (InterPro:IPR007087); contains InterPro domain D111/G-patch; (InterPro:IPR000467) Range:  from: 9375186    to: 9377128    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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