Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                           --------->ANAC58                          <---------HSFB2a(2)                         --------->ANAC46                          --------->HSFB2a(2)                         --------->ANAC58                         <---------LBD16                       ---------->DOF2                            <---------ANAC46                    ------->GAMYB                                <---------LBD16                  --------->ANAC58                             <---------ARR14(2)                  ------>MYB83                                 --------->ARR14(2)                  --------->ANAC58                            <---------MYB52(1)                  ------>MYB46(1)                          <-----------------AG                  -------->P --------->At4g35610           <-----------------AGL1      <----------DOF2--------->ANAC46                   <---------ANAC58                           --     <---------ICU4--------->MYB46(3)                   <---------ANAC58      <----------ID1<-------- ---------DOF2  --------->DEAR3(1)         ---------->DOF2 ----------------->AGL1        <-----------GT1   tctttcatctttacagagccaacccacaagcagcatcaagaagccgaaagtagcaatcgcgtccgttttcgggaacgatagcgacgaagattaactttgc  9377000                                          --------->ANAC58                                  <---------AHL20(2)                                --------->ANAC55(2)                                            ------                            <---------DAG2--------->ANAC46    <---------GLK1(2)         <---------TOE2(3)  --------->AHL20(2)        <----------DOF2            <-----------HVH21               <-----------GT1 ------->REM1(1)      --------------->AtSPL8          <----------DOF2             --------->AHL20(2) --DOF2             --------->ATHB12      --------->ANAC58    <---------ARR11(3)  <---------AHL20(2)   tacattatatgatcagaaacattgattgtactttatgtaattctacgctatggttcctttcacagattttaaaacagaatataaaaaattaacatttgtc  9377100                     ----------->GT1             <---------YAB1                                     <---------MYB52(1)            <---------TOE1(2)--------->TOE1(3)                 ----------->GT1    ---------->DOF2    <---------AHL20(2)     <---------ARR11(3)                 ----------->GT1  <---------MYB52(1)  <-    --------->AHL20(2)     --------->ARR11(3)         --------->WOX13(1)    <-----------------------TaNAC69(2)   --------->AHL20(2)<---------MYB46(3) <----------DOF2    --------->MYB52(1)----------->GT1    ----- ---->ID1   <---------TOE2(2)--------->TOE2(3)     --------->TOE2(3)  ---------->DOF2       ---------   ttcaattttattcatatgtttgtttgttaaatcttaaatactctttgtctatacatcaatctaaccgttaaaaaaagaaccgttaaaagtgtcaacactc  9377200                                                                                      ------->MYC3                                                                                      <-------MYC3                                                                                     <---------ANAC46                                                                                     <---------O2                                                        <------MYB46(1)              ================                                                        <---------At4g35610          --------->ANAC55(2)                                                        --------->At4g35610          <---------ANAC55(2)                                                        <------MYB83                 <---------ANAC58                                                       --------->MYB111(2)           <---------TGA1a                                                       --------->MYB46(2)            --------->TGA1a                                                       --------->MYB111(1)           <---------bZIP60(1)                                           <---------YAB1                        <-----------HVH21                                           --------->ICU4 ----------->HVH21     --------->ANAC46                                   <-------MYC3        <---------MYB46(3)       --------->ANAC58                                   ------->MYC3        --------->MYB55(2)   --------->ANAC58                                   ------->MYC2       <---------MYB55(1)    --------->ANAC46                                   <-------MYC2     <------MYB46(1)        <-------PIF5                                  --------->O2     --------->MYB111(2)     ------->MYC3                                  <---------TGA1a  --------->MYB111(1)     ------->MYC2                                  <---------O2     --------->MYB46(2)      <-------MYC2                                  --------->TGA1a  --------->MYB59<---------HSFB2a(2)--------->O2                                  =============================MYC_MYB     <-------MYC3         --------->SPL7           --------->ANAC55(2) <--------P  --------->HSFB2a(2)<---------ANAC58     --------------->AtSPL3       --------->ANAC46 <---------MYB46(3)      ------->PIF5 --------ICU4      =========================bZIP_DOF<------MYB83------>MYB46(1) --------->ANAC58  --- ---->YAB1         ---------->DOF2<---------ANAC55(2) =========================================MYC_MYB >ZAT6 --------->LBD16        <-----------GT1   --------->ATHB12------>MYB83--------->ANAC58---------   atcagtacccgtacaaaaactaaaagaccatttaacacgtgagtgaagattgtttggtaggtgaccttccaaaaccacgcgcaagtcacgtgagccacaa  9377300                                                                                     --------->WOX13(1)                                                                                   <---------YAB1                                                                                 <---------ICU4                                                                                 <--------HAHB4                                                                                 --------->YAB1                                             <---------ALFIN1                    --------->ATHB51                                            <---------ZAT18                      -------->HAHB4                                            <---------ZAT14                      <---------AHL20(2)                                          --------->ATERF1(1)                    -------->ATHB1                                          --------->ANAC58                      <---------ATHB51                                          --------->ANAC58                      --------->ICU4                                          <------NtERF2                         <---------YAB1                                         ------>NtERF2                        --------->YAB1                                        <---------PCF2                        <---------ICU4                                       <---------ABI4(2)                     <---------YAB1          <---------DAG2   ------>ZmHOX2a(1)--------->ZAT14 ---------->ID1 --------->YAB1          <----------DOF2 --------->TOE2(3)--------->DEAR3(1) <----------DOF2<---------AHL20(2) ====================bZIP_DOF      <---------O2       <---------ALFIN1   <-----------TBP -------->RAV1(1)<-----------GT1  <------NtERF2 <----------DOF2        <----------DOF2 -->RAV1(1)    <-----------HVH21 <-----------HVH21 <-----------GT1   ------>ZmHOX2a(1)  --------->YAB1   caacaaaaacctctttttgtcacagtttcctaagtcgtcgtggcaccgcactttcaccacttgtctttatcctctttttataattattaatcaaaatcaa  9377400                                                                                                    <                                                                                                    <                                                                                                   --                                                                                                -----                                                                                                <----                                                            --------->ATERF1(1)                 -----                ----------->RAV1(1)                         <------NtERF2              <-------TEIL--               <----------ID1                             <---------ANAC58          --------->HSFC1(2)             --------->ANAC46                             <---------bZIP60(1)       <---------HSFC1(2)             --------->ANAC58                             <---------ANAC46          <---------HSFB2a(1)             --------->ANAC58                             <---------ANAC58          --------->HSFB2a(1)      --------->DAG2                                      --------->bZIP60(1)--------->LBD16   ------     --------->ICU4                                <---------ATHB12        <---------LBD16   <-------     *TSS  ---------->DOF2 <<<<<<<<<TBF1         --------->WOX13(1)      <---------ALFIN1 <---------CCA1(2)   atgagcaaaaattgaaagcaacaaatttcttcttctcttcttcaagctcatcaatcaatggcgtcgtctctatctccaccggaagaagcttcgtatcacc  9377500                                                         --------->MYB46(3)                                                         <---------HSFB2a(1)                                                         <------------AtMYB77                                                         --------->DEAR3(2)                                                         --------->HSFC1(2)                                                         <---------HSFC1(2)                                                         --------->HSFB2a(1)                                                     ------->GAMYB                                                    --------->ANAC58                                                    --------->ANAC46                                                    --------->ANAC58                                                   ------>MYB83                                                   ------>MYB46(1)                                                  --------->MYB52(1)                                                 --------->AtMYB61                                                 --------->MYB46(3)           --------->DAG2                       --------->MYB46(3)           --------------->AtSPL3               <---------MYB52(2) -----------HVH21                             <---------ALFIN1 -----------TGA1          <---------At4g35610 --------->AtMYB61   --------->YAB1 ------->DEAR3(1)      ------>ZmHOX2a(1)   <---------ALFIN1       --------->ATHB12                 -- ---->AtMYB61         <---------ALFIN1     --------->ANAC46<-----------HVH21                      <-- -----ALFIN1    <---------ALFIN1   <---------At4g35610 --------->ARR14(2)                         --- ---->DEAR3(1)  --------->REM1(1)  --------->At4g35610 <---------ARR14(2)  ----------------->AGL1 --- ------->DREB2C(2) --------->AtMYB61     ------>ZmHOX2a(1)--------->DEAR3(1)       --------->TOE2(3) --->MYB46(3)  <-------TEIL     ------>ZmHOX2a(1)--------->DEAR3(1)        ----------------->AG  <--- ----GT1 ---------->DOF2  --------->At4g35610--------->MYB46(3)  <---------ATHB12  <-----------HVH21   accgtcataccaaaaggtacacctcctccgcttcctccgcttcctccaccaccaacggaaccgtcgaatcatcggtttccgatttcgtcaaacgtcccaa  9377600                                                                                              <------                                                                                              -------                                                                                              -------                                                                                            <-------GAMYB                                                                      --------->ANAC58      <--------                                                                      --------->ANAC58      <--------             --------->AHL20(2)                                --------->GLK1(1)           <---------MYB46(3)             <-----------GT1    <------ZmHOX2a(2)             <---------ARR14(2)          <---------AtMYB61 ------->RVE1(1)            --------->LBD16                   --------->ARR14(2)     --------->MYB52(2) -------ARR11(3)        <---------ARR14(2)                    <---------GLK1(2)    <---------MYB52(1) ------>ARR11(3)        --------->ARR14(2)               <------ZmHOX2a(2)        ------->GAMYB<----- ------>GLK1(2)--------->ANAC55(2)                      --------->ARR14(2)     --------->MYB52(1) ------GLK1(2) <---------ANAC55(2)    --------->YAB1    <---------ARR14(2)    --------->MYB46(3)   aatctctcatccgaattacatatcaagttccgagatcgaatcagagttttctcatcacgatccagatttcgcaagaatcaacaacggtagttttggttgt  9377700                                          <---------ARR14(2)                                          --------->ARR14(2)                                         <---------MYB52(1)                                        --------->LBD16                                      <---------LBD16                                    <---------ARR14(2)                                    --------->ARR14(2)                                   <---------ZAT2                                   --------->At4g35610                                   --------->ZAT2           ------>ZmHOX2a(2)  <-----------HVH21                --------->ATERF1(1)     <------ZmHOX2a(2) --------->ANAC46                  <---------At4g35610    --------->ARR14(2) ---MYB46(3)                       <------NtERF2          <---------ARR14(2) -->MYB55(2)                 <---------WOX13(1)        ------->GAMYB -->MYB111(2)    <----------DOF2  <<<<<<<<<AtERF-3    <---------LBD16                            <--- -ANAC58      <---------TOE1(2)   <<<<<<<<<AtERF-4 <---------WRKY12                       --------->ARR11(3) -ANAC58     ------>ZmHOX2a(1)    <---------ATERF1(1)-------->P                           <---------ARR11(3) --GAMYB--------->WOX13(1)  --------->ARR14(2)   <-----------HVH21                 >>>>>>>>>>MYB80---   tgtccgtcatcaatcctagctttacaacgagattggcagctccggttccttcgtcaaccggatcgattctatttcgacgaactcaaaccaaaaatctccg  9377800                                                                             --------->ZAT2                                                                             <---------ZAT2                                                                             <---------At4g35610                                                                           <-----------RAV1(2)                                                                          --------->LBD16                                                                         ------->GAMYB                                                                         --------->ANAC46                                                                       -------->P                                                                      --------->MYB55(1)                                                                      ------->GAMYB                                                                     <---------MYB55(2)                                                                     <---------MYB52(2)      ------>ZmHOX2a(2)                                              --------->MYB46(3)     <------ZmHOX2a(2)                                               <---------MYB111(2)    --------->ARR11(3)                                             ----------->RAV1(1)    --------->ARR14(2)                                             ====================RAV    <---------ARR11(3)                                          --------->ANAC58    --------->AGP1                                              --------->ANAC46    <---------ARR14(2)          ------>NtERF2                   --------->ANAC58    <---------AGP1 --------->At5g28300                          <---------ANAC55(2)              ---- <---------HSFB2a(2)           --------->DEAR3(1)             ---------->DOF2--------->At4g35610----- --------->HSFB2a(2)        --------->ANAC46                  <---------DOF5.7(2)              <----- ------GLK1(2)    ----------->GT1                           --------->DOF5.7(2)     <---------ATHB12 ------>GLK1(2)--------->MYB52(1)    ----------->TGA1  ------>ZmHOX2a(2)--------->MYB46(3)     ------   attctagatctgtaatcaaacggttaataaacgccgagcatgacgatgaagtctcgatcgtcgataacgcaacaaccgcagctgcaatcgttcttcaaca  9377900  Previous    Next  AGI:  At5g26610.1    Description:  D111/G-patch domain-containing protein. similar to D111/G-patch domain-containing protein [Arabidopsis thaliana] (TAIR:AT2G42330.1); similar to D111/G-patch domain-containing protein [Arabidopsis thaliana] (TAIR:AT2G42330.2); similar to D111/G-patch domain-containing protein [Arabidopsis thaliana] (TAIR:AT1G17070.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO17343.1); contains InterPro domain Zinc finger, C2H2-like; (InterPro:IPR015880); contains InterPro domain Zinc finger, C2H2-type; (InterPro:IPR007087); contains InterPro domain D111/G-patch; (InterPro:IPR000467) Range:  from: 9375186    to: 9377128    Orientation: Forward Links:  TAIR  MIPS    AGI:  At5g26600.1    Description:  catalytic/ pyridoxal phosphate binding. similar to epimerase-related [Arabidopsis thaliana] (TAIR:AT3G62130.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO40231.1); contains InterPro domain Pyridoxal phosphate-dependent transferase, major region (InterPro:IPR015424); contains InterPro domain Pyridoxal phosphate-dependent transferase, major region, subdomain 1; (InterPro:IPR015421); contains InterPro domain Aminotransferase, class V/Cysteine desulphurase; (InterPro:IPR000192) Range:  from: 9377405    to: 9379021    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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