Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                              <-------GAMYB                                                                                           --------->MYB111(2)                                                        <---------ANAC46                   --------->MYB55(2)                                                        <------MYB46(1)                    --------->MYB52(2)                                                        ----------->GT1                    <---------MYB46(3)                                                        <------MYB83                       --------->MYB46(2)                                                        <---------ANAC55(2)               <---------MYB55(1)                                                 <------MYB83                             <--------P                                                 <---------ANAC55(2)                     --------->At5g28300                                                 --------->ANAC55(2)                     <---------MYB52(1)                                                 <------MYB46(1)                         <-------GAMYB         <---------STY1(2)                      --------->MYB59                          <------NtERF2 -----AHL20(2)                                  --------->MYB111(1)                    <---------RAP2.6(2) ---->AHL20(2)                         ---------->DOF2 --------->MYB59           --------->ATHB12 -->YAB1 --------->STY1(2)           ----------------->AG                       --------->ARR11(3) -->TOE2(3)                    <---------YAB1   --------->MYB46(2)       ---------->DOF2<---------MYB46(3)   aattaacatcgagctagttactgaaatttcattttgattaccaaagaagttaggtattaggtgaaatagttctaccaaagaagttattggcggtagttga  9246700                                                                       --------->AHL20(2)                                                                   --------->AHL20(2)                 <---------AHL20(2)                             <----------DOF2                 --------->AHL20(2)                             --------->TOE2(3)             ------>ZmHOX2a(1)                               ------->TEIL        --------->ANAC58                                    <---------CCA1(2)              ----------        --------->ANAC58 <---------MYB52(1)               --------->ANAC55(2)              <---------ANAC46   aaacatgagcaagtcctatttaaaatcgttttttgagaaaacttgcactaacaaaaacttatgtatctttaaaataaaaacttcttctacgttttgtata  9246800                                                                                                  <--                                                                                                 <---                                                                                               ------                                                                                               <-----                                                                                               <-----                                                                                              <------                                                                                              -------                                                                                    ------>MYB83<----                                                                         <---------bZIP60(1) --------                                                                         --------->O2 --------->YAB1                                                                         <---------O2<---------ATHB12                                                                         ============================                                                                         --------->TGA1a     <-------                                                                         --------->bZIP60(1) --------                                                                         <---------TGA1a    <--------                                                                      --------->DEAR3(1)    ------>NtERF2              ----------->GT1                               <---------LBD16         ------>MYB46(1) <           <------ZmHOX2a(1)            --------->MYB52(1) --------->MYB52(1)     <---------MYB59----     --------->CCA1(2)           --------->YAB1    <---------YAB1    --------->DEAR3(2)     --------- ->GT1 ---------->DOF2      ----------->GT1   ----------->GT1 --------->LBD16    --------->MYB46(3)<-   atataagataaaaggattgtattatacatatagaaaaataactaagggatgttaatattcttaccggagacaccgacgtcgtaaccaaacatgaggccgc  9246900  --------->At4g35610  <---------At4g35610 -------DEAR3(2) ------ATERF1(2) >NtERF2 ----ATERF1(1) -NtERF2 ---DEAR3(1)               <---------YAB1 -->DEAR3(1)          --------->YAB1 --NtERF2--------->ICU4 <---------YAB1                                                    --------->WRKY18(1) ->ATERF1(1)         <---------YAB1                                                      <-----------HVH21 ========MYC_MYB   --------->CCA1(2)                                                    --------->LBD16 --RAP2.6(2)      <---------ARR11(3)                                                  <---------LBD16 ->RAP2.3(1)      <---------ARR14(2)                                          <---------ARR14(2) -ATERF1(1)       --------->ARR11(1)                                          --------->ARR14(2)----- --------P        --------->ARR11(3)                --------->ZAT6 --------->DEAR3(1)------>ZmHOX2a(1) ----->ATERF1(2)--------->ANAC58              --------->TOE2(3)--------->SPL7--------->GLK1(1)  ----- >ATERF1(1)     --------->ANAC58         <----------DOF2      <---------MYB52(1)  ------>ZmHOX2a(1) --------MYB52(1) --------->ARR14(2)   <---------YAB1        <---------SPL7  <---------GLK1(1) ------   cggtagcagccatgatgcaagatatgatgactattggagttatctttgcctcaaactctactccgttcgccgaagtcgcaaatcctcctccggtcatcct  9247000 --------->ARR11(3)                                                                    <-----------GT1 <---------ARR11(3)                                                            <---------ANAC46 ---->LBD16            ---------->DOF2                                     <------------CBF    ------ ->ZmHOX2a(1)  ---------->DOF2                                       *TSS --------->ATHB12     <----- --->TOE2(3)--------->At4g35610            ----------->GT1        ---------->DOF2  --------->ALFIN1   gaatatctcttagaagctaaagtttaaaagttattttctctcaaggagttaaacagaaacacttaagttaaagagaccattgggggtgtttacttcatta  9247100                                                            --------->O2                                                      <---------ANAC58                                                      <---------ANAC58                                                    --------->GLK1(2)                                                   <---------GLK1(2)                                                --------->YAB1                                               ----------------------->TaNAC69(2)                                               <---------ATHB12                                           ------------>CBF --------->ANAC58                                          ------>NtERF2     --------->ANAC58    --------->ANAC58                   --------->ANAC58       <---------At4g35610     <----------DOF2                   ----------->GT1     --------->At4g35610  =================bZIP_DOF          <---------TOE1(3)            <---------At4g35610  --------->TGA1a     --------->ANAC58   -- --->AHL20(2)      --------->ANAC58 --------->At4g35610     --------->ANAC46   <-------MYC3     ----- ------TBP<---------TOE2(3)         <---------At4g35610     <---------TGA1a    ------->MYC3     -----   tatagagaagttgaggtagtgaagcaaaaatagatgttatctgcagccaatgagattcttgcacgtctctttttatgttcacatgctactgagtcatcaa  9247200                                                <------NtERF2                                                --------->ATERF1(1)           --------->MYB52(1)                  <---------ATERF1(1)          ------->GAMYB                       <---------ANAC58         --------->MYB46(3)                   <---------ANAC58         <---------MYB52(2)                   <---------bZIP60(2)         <---------MYB55(2)                   <---------ANAC46      <---------WRKY12                        --------->bZIP60(1)      <---------WRKY38(1)                <-----------RAV1(1)    <---------YAB1      <---------WRKY45               <---------DAG2          <---------YAB1             <---------ICU4     --------->WRKY18(1)             <----------DOF2 ------>ZmHOX2a(1)                  --------->YAB1 ------->ATHB12                      <---------------AGL15   ------>ZmHOX2a(1)         <---------ATHB12 ---->ANAC58                         ================================================================ ---->ANAC58                  <----------DOF2 <---------bZIP60(1)         <-----------GT1 <---------YAB1   gtcattggtcaacaaacgttttcttctaaactctttctgctttatgtggcgtctccttaagtccttatagttgaatatacaatttgcccatcatcatata  9247300                                                     <---------AHL20(2)                                                 <---------YAB1              <---------YAB1                                           <---------YAB1                 <---------YAB1                                         <---------AHL20(2)     --------->GLK1(2)                   <---------ZAT6    <---------YAB1  --------->AHL20(2)   <---------------AGL15             <---------YAB1         --------->AHL20(1)         --------->ARR14(2)          --------------->AGL15     <---------AHL20(1)         <---------ARR14(2)          <---------------AGL15   <---------YAB1<---------TOE2(3)     <----------DOF2          ================================================================================MADS_MADS         <---------ANAC58        --------->AHL20(2)<<<<<<<<<MYB98 <-----------GT1         <---------ANAC58  ------>ZmHOX2a(1) <---------AHL20(2)--------->ARR11(3)         <----------      <----------DOF2   <---------YAB1   --------->AHL20(2)    <---------GLK1(2)       ----------->GT1 =========================MADS_MADS <---------AHL20(2)   --------->YAB1   --------------->AGL15   agtcttctctttcttgttatagtattatcctcgaatattatatttatttttatgttaaattataagattctcctttcttattagagagattgttacattt  9247400                                               --------->ANAC58                                               --------->ANAC58                                  --------->ARR14(3)                                  <---------ARR14(3)      <---------HSFB2a(2)                                  --------->GLK1(2)    --------->ARR11(3)                                  <---------ARR11(3)   <---------ARR11(3)                          <-              <---------ATHB12    <---------ARR14(2)  --------->RVE1(1)    <----------DOF2         <-            --------->WOX13(1)    --------->ARR11(3)  --------->CCA1(1)<-----------GT1             <-  <---------CCA1(2)        <---------ANAC46 ------->GAMYB --------->HSFB2a(2) --------->HSFB2a(2) <-- -GT1    <-----------HVH21 ----------->GT1 --------->MYB46(3)   ----------->GT1           --------->ATHB12   tctcatatcgctgtcaatgactcaatgtgttgtgaaaatcttgcaaccgaagcaaaatatctcgaaatgtattataccttttagaatatgaacgatttgg  9247500                                 <---------ANAC58                                 <---------ANAC46                                 <---------ANAC58                        <-----------HVH21                                                  <---------ANAC55(2)                        <-----------TGA1                                                   <---------ANAC46                       --------->ANAC58                                              <---------TOE2(3)         --------->AtLEC2        <---------ANAC55(1)                            --------->ATHB12 <---------MYB52(1)    --------->ANAC58                                        <---------AHL20(2) --------ANAC58        --------->ANAC46     <-----------GT1                    --------->AHL20(2) --------ANAC46        --------->bZIP60(2) <---------AHL20(2)                  --------->AHL20(1) --------ANAC58---------->DOF2  --------->MYB52(2)             <----------DOF2 <---------AHL20(1) -------DEAR3(1)     --------->MYB52(1)   --------->AHL20(2)   ------>ZmHOX2a(1)<---------AHL20(2) <-   gccgtgtgttcatacaaaatagccaacgtcatgttacttgtgaattttatcttactaattctgtcctttgtattgtctaaatttattgatgttatgtata  9247600  Previous    Next  AGI:  At5g26340.1    Description:  MSS1 (SUGAR TRANSPORT PROTEIN 13); carbohydrate transmembrane transporter/ hexose:hydrogen symporter/ high-affinity hydrogen:glucose symporter/ sugar:hydrogen ion symporter. Identical to Sugar transport protein 13 (STP13) [Arabidopsis Thaliana] (GB:Q94AZ2;GB:O81501;GB:Q0WM12); similar to sugar transporter, putative [Arabidopsis thaliana] (TAIR:AT4G02050.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN61766.1); similar to hexose transporter [Vitis vinifera] (GB:AAT09979.1); similar to hexose transporter [Solanum lycopersicum] (GB:CAB52689.1); contains InterPro domain General substrate transporter; (InterPro:IPR005828); contains In Range:  from: 9243514    to: 9247069    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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