Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                    <--                                          <---------ARR11(3)     --------->TOE2(3)                ---                                          <---------AHL20(1)     --------->YAB1                   ---                                          --------->AHL20(1)   --------->ARR11(3)                <---                                          --------->ARR11(3)   <---------ARR11(3)        ------>ZmHOX2a(1)                                     ------>ZmHOX2a(2)        <---------GLK1(1)        <---------ICU4                             <---------GLK1(2)         <---------TOE2(3)             --------->ARR11(3)             <---------ARR11(3)     <---------At4g35610<---------YAB1  --------->YAB1<---------ARR11(3) ---GT1      --------->GLK1(2)--------->GLK1(2)        <---------TOE1(3)            --------->RVE1(1)   aacttcgaatacaaaaatctgaatagaaccagaatttgatctgatatattttgagttatggtagaaatcttaatcagaaaactaaaaaatccttacaata  9225700                                                                                           ------->TEIL                                                                                         --------->ZAT14                                                                                  --------->AHL20(1)                                                                                  --------->ARR11(3)                                                                                  <---------AHL20(1)                                                                               --------->AHL20(2)                                                                               --------->YAB1<-------                                                                              <---------ATHB51                                             <------MYB83                     <---------ATHB12 ---------->DOF2                             <------MYB46(1)             ------->GAMYB   <---------ZAT18 -------MYB59                               <---------AtMYB61         <---------DOF5.7(2)--------->ZAT18 ------>TOE1(3)             <-----------GT1<--------P               --------->DOF5.7(2)  <---------ZAT14 ------>TOE2(3)       <---------YAB1     --------->ALFIN1         <---------MYB46(3)  <---------ANAC46 ------ANAC55(2)--------->AHL20(2)       <-----------RAV1(1)      ----------->GT1 <---------AHL20(2)<   cctaaacgctcagacctataaattttgatttatctacatttcggtgttggtgatatactgacaccgagtcgttaacagcaataatattttgtgtactttg  9225800               --------->ANAC46          --------->ARR14(2)         --------------->AtSPL3                ------>MYB83          <---------ARR14(2)    --------->YAB1                 ------------>CBF ------>ZmHOX2a(2)             <---------YAB1       <-------TEIL         ------->GAMYB ---DOF2 --------->GLK1(1)   --------->YAB1      --------->At4g35610     --------->AtMYB61 ------ZmHOX2a(2)     <------------CBF   ------->TEIL   --------->AHL20(2) ------>MYB46(1)<----------DOF2   agatcgctcacaaatccacagaaatattgttttataatagacgtacttggaagatgcataaaatagacaatacaaccaaatcaaatttgatactttacac  9225900                                                                         <---------MYB52(1)                                                  <---------ANAC58      <------MYB83                                                  <---------ANAC58      <------MYB46(1)                                              <------------CBF         --------->MYB59                                             <---------ICU4           <-------TEIL                                             --------->ATHB51       <-------MYC3                                            <---------YAB1          ------->MYC3                                          <--------HAHB4            ------->MYC2                              <---------------AtSPL8                <-------MYC2                              --------------->AtSPL8            --------->ZAT18             ---------                       <------------CBF   --------->YAB1        <---------ZAT18  <---------YAB1     -                 ----------->GT1         <---------YAB1     <------ZmHOX2a(1) <---------AHL20(2)    < ---------->DOF2 <XXXXXXXXXXXXXXXXXXXXXMIR777--------->ATHB12   <---------WRKY38(1)     <-----------GT1   attcaaagtcaaacaaaaacagtgaaattgaatgtgtacatgtattattattgcttccacgaggagtccacgttcggtattttatatttgttactaaact  9226000                                                                      ------>ZmHOX2a(2)                                       ---------->DOF2               <------ZmHOX2a(2)                                <---------AHL20(2)                   --------->GLK1(1)              ---------->DOF2   ----------->TBP                     --------->ARR11(3)      <---------ANAC55(2)       --------->AHL20(2)                  <---------ARR11(3)      --------->ANAC55(2)     <---------------AGL15                 --------->AGP1    <---------ATHB12          --------------->AGL15                 <---------AGP1   --------->ANAC58 >ZAT14     --------->YAB1   <-----------------AGL3                 --------->ARR14(2) ----------->CBF            --------->AHL20(2)                      <---------ARR14(2)          <---- ------ZmHOX2a(2)           <-----------TBP  --------->DOF5.7(2)   <---------CCA1(2) --------->ANAC58   cgatcaataagtaatcaaaagtgtctctgtttatataaatggaaagcgttaccaaaacaaaacaaaaccagatctcaaaaaatggacactcaaaaatgga  9226100                                                      ------>ZmHOX2a(1)                                                 --------->GLK1(1)                                                 <---------At4g35610                                                 <---------ZAT2                                                 --------->At4g35610                                                ----------->ARR10                                             <----------CDC5                   <---------DAG2           ----------->RAV1(2)          <---------ARR11(3)                --------->At4g35610                  <----------DOF2          --------->ARR11(3)                <---------At4g35610            <-----------GT1         <---------CCA1(2)                  --------->LBD16           <----------DOF2 -----ANAC46       <----------DOF2    ------>ZmHOX2a(1)   --------->AHL20(2)     <---------DAG2   gtataggtttcatatctctcgcttttctcttcatcacttcctcttccgctgagctcctcattaaacaggtttctttttaagcactttttctatcgatatg  9226200                                                                              <------ZmHOX2a(1)                                                                           <---------At4g35610       <-----------GT1                                          ----------->RAV1(1)   <---------YAB1           --------->ICU4                  --------->MYB59<------NtERF2 ----------->RAV1(1) <---------AHL20(2)    ----------->GT1               --------------->AGL15 --------->At4g35610   tttttatttttactacaaaactagtttgtaaaaatgaataaaactaatagttttgctaatattaggccacagaaggcagaggaatagaatacaacagttc  9226300                --------->ANAC58                <---------ANAC58                <---------ANAC55(2)                --------->ANAC58                <---------ANAC58            --------->ATHB12               --------------->AtSPL8      <---------AHL20(2)               <-------TEIL <---------AHL20(2)  ----------->GT1               --------------->AtSPL3   --------->ARR11(3)            <-----------GT1               --------->SPL7           <---------ARR11(3)         --------->YAB1               -----           <---------------AtSPL3  <----------DOF2      --------->TOE2(3)                  <---------YAB1    <---------ZAT14         <-----------GT1--------->AHL20(2)   ----------->GT1            <---------AHL20(2)    --------->ZAT14<-------TEIL<----------DOF2  <---------MYB46(3)<---------YAB1        <----------DOF2   tcacagttcacgaatggtacgtacacttattttctttctttagattttattggttaaaacttaaaactgtgataaccattttcttgaactctttttattg  9226400                                                                          <------ZmHOX2a(1)                                                                       <---------ICU4                                                                      --------->ICU4                                                                    <------------ATHB5                                --------->MYB52(1)                  --------->YAB1                              --------->MYB46(3)                    <--------ATHB1                            --------->ORA47(1)                      <--------HAHB4                           --------->MYB46(3)                       --------->ATHB51                           --------->DEAR3(1)                       --------->ATHB12                          --------->DEAR3(2)                        <---------ICU4                        <---------WRKY18(1)                        --------->ICU4              <-----                       ----------->HVH21                           <---------ATHB51            ------               --------->ALFIN1--------->AtMYB61                   --------->AHL20(2) ------->TEIL --              <---------ZAT14------>MYB46(1)              --------->ZAT2 <----------ID1        ------    ----------->HVH21  --------->WRKY38(1) --------->GLK1(2)       <---------ATHB12----------->HVH21 <------ZmHOX2a(1)<---------ANAC46      ----------->ARR10 <---------ZAT2--------->MYB59     <-------- ---->ATHB12 --------->ALFIN1------>MYB83 <---------GLK1(2)<---------GLK1(2)     ----------->RAV1(2)   ataggagtgacaagagtgtggagggatgaccgaccatcggataagattctttcgataaccagcttctcaataattaggacgagacctgaaccctatgaat  9226500                                            <---------ARR11(3)                                            --------->ARR11(3)                                  <-----------ARR10                                  --------->ARR14(3)                                  <---------AGP1                  <-------GAMYB   <---------ARR14(3)                                            <----                 <---------MYB46(3) ------>ZmHOX2a(2)                                          ------                 --------->MYB52(2)<------ZmHOX2a(2)                                      <---------At4g35610                 <------MYB46(1)  --------->ARR11(3)                             --------->ARR11(3)               <---------MYB52(1) <---------ARR14(2)                             <---------ARR11(3) ----ARR14(2) <-------GAMYB       --------->ARR14(2)                            <---------CCA1(2) <-- ->TEIL      <-----------RAV1(1)  <---------ARR11(3)--------->ANAC46          --------->YAB1   <----- ---->ZmHOX2a(1) <------MYB83 ---------->DOF2   <-----------GT1               --------->AHL20(2)----- --->ARR14(2)<---------MYB46(3)  --------->RVE1(1)--------->ZAT6              <---------AHL20(2)----- -ATHB12 <---------TOE2(3) ----------->GT1 <---------CCA1(2)    <---------AHL20(2)  <----------DOF2   cctctgtttttgaggctgttggttacaaatggtaaagatcttagtatatcttacactctatcccattttttttttgttaattatatcttttgagctaatt  9226600  Previous    Next  AGI:  At5g26290.1    Description:  meprin and TRAF homology domain-containing protein / MATH domain-containing protein. similar to meprin and TRAF homology domain-containing protein / MATH domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G26280.1); similar to unknown [Populus trichocarpa] (GB:ABK94833.1); contains InterPro domain MATH (InterPro:IPR002083); contains InterPro domain TRAF-like (InterPro:IPR008974) Range:  from: 9226082    to: 9227876    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version