Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                        <---------ANAC46                        <---------------AGL15                                      <---------ANAC58                        --------------->AGL15                                      <---------ANAC58                       <-----------------AGL2                                 <---------ANAC58                    <----------DOF2       <---------ANAC58                         --------->ZAT2     --------->ANAC58      <-----------GT1     <---------ANAC58               --------->ANAC58  <---------ANAC58              <---------AHL20(2)     <-------GAMYB               --------->ANAC58--------->SPL7                 --------->AHL20(2)      <---------ANAC58           <-----------HVH21 ----------->HVH21            <---------AHL20(2) <---------ANAC58     ---          <---------ETT(2)  --------->TOE1(1)             --------->AHL20(2) <---------ANAC58     <--       --------->ANAC46  <---------ZAT2     --------->ANAC58  <---------AHL20(1)     <---------MYB46(3)    ------->TEIL       <---------ALFIN1     --------->ANAC46  <---------AHL20(2)    <---------AtMYB61 ------ALFIN1---------->DOF2--------->TOE2(1)           <----------DOF2   <----------DOF2  <---------ANAC58   cacttgaacccgtcgtcaagcacttccacctcggaccgtgtcttgaacgcaactctccctttaatttttttcttttctttcttgttttggttgtcttgca  9147700        <------ZmHOX2a(1)       ----------->GT1                         <-----------RAV1(1)       <----------ID1                <---------ZAT14      --------->TOE2(3)      ----------->GT1           <---------ANAC46   <------MYB46(1)               ------>ZmHOX2a(1) ---->MYC3                      <---------ANAC58   <---------MYB46(3)--------->MYB59 -----MYC3  ---------->DOF2     <---------ANAC58   <------MYB83    <---------MYB52(1)        <-------TEIL   tatggaaataggaaaaaagaaaacagagttaatgacttgtaaactgcaaatgttggttcacctaaaactgttaggctcaagtcctaatgtctacgttcgc  9147800                                                                          --------->At4g35610                                                                          <---------At4g35610                                                                     <---------ATERF1(2)                                       <---------YAB1                --------->ATERF1(2)      -------                                 ------>ZmHOX2a(2)                  <---------LBD16         ---------                               --------->ARR11(3)                   --------->RAP2.6(3)    --------->ANAC46                               <---------ARR11(3)                  -------->P     <---------MYB46(3)                         <---------TOE2(3)             ---------->DOF2--------->LBD16    --------->At4g35610        <---------ANAC58<---------DOF5.7(2)<---------ZAT6          --------->MYB52(1)    <---------At4g35610        <---------ANAC58--------->MYB52(1)<---------YAB1      <-----------ARR10  --------->ALFIN1   atagttaggggcttatgtttttgaattaacgatgatctgttcttattgttagaaaccaaaagagaaacttaccggcagaagcagtggctgtagcagcaac  9147900                                                        --------->DAG2                                               --------->TOE2(2)                                               --------->TOE1(2)    --------->REM1(1)                                              ================================RAV                                              ==========================RAV                       <------ZmHOX2a(1)      ----------->RAV1(2)   --------->bZIP60(2)                     <---------TOE2(3)       ------->TEIL   ----------->RAV1(1)                    <-----------RAV1(2)      --------->GLK1(2)    ----------->RAV1(1)                   <-------TEIL             --------->ARR11(3) --------->ANAC58       --------->TOE2(3)                  --------->GLK1(2)         --------->ARR14(2) --------->ANAC46       --------->TOE1(3) ---->RAV1(1)     --------->CCA1(2)         <---------ARR14(2) --------->ANAC58       --------->YAB1 >At4g35610      <---------ARR14(2) --------->At4g35610---------->DOF2         <---------YAB1     <--   ataagttttggtacttggagattcaggatgactgaaacagctagaagaacctgagaataaagcaccagcaacatcactagtctgataaccataagactga  9148000            --------->LBD16        --------->ARR14(2)        <---------ARR14(2)                                  --------->LBD16       --------->ARR14(2)                                  <---------HSFB2a(2)       <---------ARR14(2)                                  --------->HSFB2a(2)       ---------->DOF2                                    <---------LBD16     --------->LBD16       <---------YAB1              --------->ZAT2    --------->HSFB2a(2)  --------->YAB1                <---------ZAT2    --------->LBD16     <------ZmHOX2a(2)   ----------->HVH21    <---------HSFB2a(2)--------->ARR11(3) --------->At4g35610 --------->ARR14(2)     --------->YAB1   <---------LBD16     <---------ARR11(3) <---------At4g35610 <---------ARR14(2)    <---------YAB1 -----TEIL  --------->At4g35610           ----------->RAV1(2) <---------GLK1(2)    <-----------ARR10   ttcatcccggaaaccgcagacacaagatcatcatccatccattcatctgacaagtctagctccggaaactcgaacacagagtgagtatcatcgctgaaac  9148100                                                                            <----------DOF2                                                                            <---------DAG2                                                                      ------>ZmHOX2a(2)                                                                    --------->ARR11(3)                                                                    <---------ARR11(3)                                                                <---------ANAC46                                                                <---------ANAC58<---------ANAC58                                                                <---------ANAC55(2)                <-                                 --------->MYB46(3)             --------->ANAC55(2)                <-                               --------->ANAC46                 <---------ANAC58<---------ANAC58   --                         --------->YAB1  <-----------GT1 --------->YAB1    <---------DAG2     <------   tactccccaagtttgtgtctgcatcattcatactcaccactatttacgaattacgcctataagaatgcgtgatcttcccttttcttggtctgaagacttt  9148200           <---------HSFB2a(1)           --------->HSFB2a(1)           <---------HSFC1(2)                              <---------GLK1(2)           <---------ZAT2                               <------------MYB.PH3(1)           --------->At4g35610                        <-----------GT1           --------->HSFC1(2)                        ----------->HVH21    ---------->DOF2                              <---------ANAC58                 <------ZmHOX2a(1) --------------AGL15                             <---------ANAC46    <------ZmHOX2a(1) ---------DOF2           <---------ZAT6          <---------ANAC58  <---------TOE2(3) ------------->AGL15   <---------ANAC46      <---------ANAC58      <---------TOE1(3) ----DOF2  <---------At4g35610               <---------ANAC58  <----------DOF2--------->TOE1(2)  ----   actttagaaaggaagcttcgatgtttagtgtttgtaagaaaatgagtacttgtgtgtaacagtttctttaaggaaacttacataggaagatggatgcttc  9148300                                                                                <---------ANAC58                                                                                <---------ANAC58                                                      <---------WRKY12        <-----------GT1                                                <---------ANAC58             <<<<<<<<<<GT-3b                                                <---------ANAC58           <---------YAB1                                                <---------ANAC46          <---------AHL20(2)                                         <---------ANAC58            <---------YAB1                                         <---------ANAC46            --------->AHL20(2)                                       <---------WRKY18(1)           <---------AHL20(2)                      --------->YAB1 <---------WOX13(1)           <----------DOF2          ---------->ID1 ---------->DOF2 <---------ANAC58       --------------->AGL15  --------->TOE2(3)  ----------->HVH21--------->WRKY12<---------WRKY38(1) <---------AHL20(1) ------>DOF2 <----------DOF2       <---------MYB46(3) <---------WRKY45  <---------YAB1   <-----------GT1   aaagccttatttgttctttctctatgacaaagactagtggttgacttgtgtcttggtccacgattactctttttattatttttcttgtttttttcaagtc  9148400                                              --------->LBD16                                       --------->ANAC55(2)                                       --------->ANAC58                                          ----                     <------ZmHOX2a(1) <---------ANAC55(2)                                <----------DOF2                   --------->ANAC58    --------->ANAC58                               <----------DOF2                   --------->ANAC58    --------->ANAC46                         <---------AHL20(2)--- <-----------GT1 <---------AtLEC2    <-----------GT1<-----------GT1 ---------->DOF2<-----------GT1<--   ttttcacaagtcttcttgtgcaaggacttaatgcttaagttacgctaccgcaaattaccatctctcatcttaaagacaccatttttttctttctttttgc  9148500                                                                                                  <--                                                                                                  <--                                                                                                  <--           <---------ATHB12                            <---------GLK1(2)                         <---          --------->AtLEC2                     ---------->DOF2                                   <---          --------->ANAC58                <----------ID1                                         <---          --------->ANAC46             <---------AHL20(2)                         --------->AHL20(2) --->TEIL --------->ANAC58            <---------AHL20(2)     <----------DOF2      <---------AHL20(2) ------>At4g35610                     --------->AHL20(2)--------->GLK1(2)     <---------ANAC46  <---- -------At4g35610                 --------->AHL20(2) ----------->ARR10    <-------GAMYB       <------   atctgtgtttccaagcaatagagacatatttgaacataaattaaatgacaaaagatagattctctttggattagactgttgagtttaattttcaacgttt  9148600  Previous    Next  AGI:  At5g26170.1    Description:  WRKY50 (WRKY DNA-binding protein 50); transcription factor. Identical to Probable WRKY transcription factor 50 (WRKY50) [Arabidopsis Thaliana] (GB:Q8VWQ5); similar to WRKY51 (WRKY DNA-binding protein 51), transcription factor [Arabidopsis thaliana] (TAIR:AT5G64810.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN73664.1); contains InterPro domain DNA-binding WRKY; (InterPro:IPR003657) Range:  from: 9147179    to: 9148131    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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