Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                           xxxxxxxxxxxx                                                                                         <---------At4g35610                                                                                       <---------ZAT14                                                                                       --------->ZAT18                                                                                       --------->ZAT14                      ------>ZmHOX2a(2)                                    <---------ATHB12        ---------->DOF2     ---------->DOF2                        <---------ANAC58 <---------ANAC58  ------->TEIL        ----------->GT1                              <---------ANAC58 <---------ANAC58 ----GLK1(1)       --------->YAB1                       <----------DOF2  --------->WOX13(1) --->GLK1(1)      <---------ATHB12                   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)   tctgaatctaaaaagcttcaatgatcgtaaaaaagaaacttgaagagatagagaatgacttttcagtttccttgttaatcaattgagcgtgaactgctac  9094500                    <---------GLK1(2)                  --------->ANAC58                  --------->ANAC58              <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)             <---------ZAT14             --------->ZAT18             <---------ZAT18           --------->DAG2                              <------MYB46(1)             --------->ZAT14          ---------->DOF2                             <---------AtMYB61           <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                  xxxxxxxxxxxxxxxxxxxx           <xxxxxxxxxxxxxxxxxxxsmallRNA(si3)                        ----------->GT1<------MYB83       <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)             --------->YAB1          <--------P       <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)       <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)         ----       <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)     xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)           <---     xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)      xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)         <------     xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)      xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)         <------    <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)        xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)         <------ xxxx>smallRNA(i) --------->ANAC46   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) ---------->DOF2 <---------   ttctagggtttgaactgcacaagaaactctaatagagagaaaaagtttgaaaggctctatgagaaatgaagggttttaaaagagttggtttttctttcgt  9094600                    --------->ANAC58                   <xxxxxxxxxxxxxxxxsmallRNA(s)                 <---------SPL7                       <---------MYB52(1)    --------->ANAC58         --------->GLK1(1)                          <xxxxxxxxxxxxxxxxsmallRNA(s)         <---------GLK1(1)                          --------->ANAC55(2)     --------->ANAC58     --------->ANAC58     ------->GAMYB             <---------ANAC55(2)    --------->ZAT18     --------->ANAC46  --------->MYB52(1)       --------->DEAR3(1)       ------>NtERF2     --------->ANAC58--------->LBD16          --------->At4g35610      xxxxxxxxxxxxxxxx>smallRNA(s)    <---------LBD16 --------->ANAC46        <---------LBD16         <------NtERF2  -------->P    --------->DEAR3(1)        <---------ARR14(2)        --------->LBD16  --------->MYB52(1)--------->ANAC58      --------->GLK1(2)        --------->ANAC46 xxx>smallRNA(si3) <---------ZAT18        --------->ARR14(2)      <---------LBD16 ----->ZAT18  --------->LBD16            <---------GLK1(2)     ----------->HVH21 ------ZAT18 --------->ANAC46     --------->ZAT18  ----------------->AGL1--------->PCF2<---------ZAT18 ---ANAC58  <---------LBD16  <---------ANAC58 --------->LBD16--------->ATERF1(1)       --------->ZAT18 ---ANAC58--------->ARR14(2) <---------ANAC58--------->ANAC46<---------ANAC58<------NtERF2    ------- ---ANAC46<---------ARR14(2)xxxxxxxxxxxxxxxx>smallRNA(s)     <---------ANAC58<---------At4g35610  xxx -DOF2--------->LBD16<------NtERF2<---------ZAT18  <-----------------AGL1xxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)   gggctacccgcatacccgcagtccgcaacgggcttgtccactagaatccgcagtccgtaatgggcctgcccgcgaggcccgctaatttgtggacaaaaaa  9094700                                                       --------->ATERF1(1)                                                       --------->PCF5                                                      <---------ATERF1(1)                                                      ------>NtERF2                                                   <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                   <---------At4g35610                                                   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                   <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                                                   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                  ------>NtERF2                    --------->At4g35610                  --------->LBD16                 --------->MYB52(1)                --------->AHL20(2)                 --------->DEAR3(1)           ------>NtERF2                    --------->ICU4                 --------->ANAC58            --------->LBD16                 --------->YAB1                 --------->ANAC46          <---------LBD16                   <---------ICU4                 --------->ANAC58          <------NtERF2     ----------->HVH21 <---------YAB1           <---------ZAT18                 --------->LBD16<------NtERF2     --------->ICU4          xxxxxxxxxxxxxxxx>smallRNA(i)   <---------LBD16 xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)         <---------ZAT2              xxxxxxxxxxxxxxxx>smallRNA(s)         --------->YAB1           --         --------->ZAT2             xxxxxxxxxxxxxxxx>smallRNA(s)        <---------TOE2(3)          -- -->AHL20(2)    xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3) xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)          <- xxxxxxxxxxxxx>smallRNA(i)          ---------->DOF2<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)           <--   atcaacgtccaagctcgctccgccatggactacttggacaaagcccgcgggctagcggcccgcttgacaactctaagaataatgaataaaaaaaactcaa  9094800                                               <---------YAB1                    <------MYB46(1)                                             --------->YAB1                      ----------->GT1                                            <---------YAB1                       <------MYB83                                        <----------DOF2                         *TSS  <-----------ARR10 ------>HAHB4                        --------->ARR11(3)                         --------->MYB59 ------->ATHB12         <---------YAB1 ------>ZmHOX2a(2)     <---------YAB1     --------->MYB46(2) --------ICU4----------->GT1         <---------ARR11(3)   <---------YAB1     --------->ATHB12     <-- -------ATHB12   --------->YAB1  --------->TOE2(3)   <-----------GT1        <---------YAB1 --------->ANAC46   atgattccatttaagttgataatattcttattcaaccttgatctttatgatgaattcacccttattgttgattccctcatgtttggtaaatctactccaa  9094900                             --------->TOE2(3)                             <---------MYB59                             --------->TOE1(3)                                                   <---           ---------->DOF2 ------>MYB46(1)                                             <---------YAB1      ------------>CBF     ------>MYB83            --------->MYB52(1)                --------->TOE2(3)  <---------ICU4           -------->P            --------->MYB46(3)                  --------->YAB1-- <---------YAB1       <---------ARR14(2)       --------->YAB1                       <---------YAB1 <- ------------>CBF     --------->ARR14(2)      <---------ATHB12                    --------->YAB1 <--- -------ATHB12       --------->GLK1(1)    ------------>CBF   <-----------GT1 ------------>CBF    <---   atgatcaatacaataaagaagacatatccaacctaaaattcttggccaataacaaacagtttgtaacgattttagatgtttcaattacgataattcatgg  9095000                                                                                           <---------ANAC58                                    --------->ATHB12                                   ------>ZmHOX2a(2)                                    -------->ATHB1                                    --------->CCA1(2)            <---------ICU4          <---------ICU4                                    <------ZmHOX2a(2)            --------->YAB1          --------->ATHB51              --------->CCA1(2)  <---------AGP1           <---------ATHB12        <---------ATHB51     <---------MYB52(1)           --------->ARR11(3)  --------->PCF5                   --------->ICU4  --------->ARR14(2)                <---------ARR11(3)  --------->TCP16(1)      >>>>>>>>>RAP2.2          <---------ARR14(2)                --------->ARR14(2)  <---------PCF2        --------->ARR11(3)        --------->GLK1(1)                  <---------ARR14(2) ------ANAC58           <---------ARR11(3)        <---------GLK1(1)        --------->MYB52(1)     --- ------->ALFIN1        --------->CCA1(1)         ------->TEIL <---------ANAC46       --------->AGP1 --------AtMYB61       --------->RVE1(1)   <---------WRKY12 <---------ANAC46       ----------->ARR10 ------ANAC58 <---------YAB1       --------->AHL20(2)  --------->LBD16   ----------->HVH21 <---------ANAC58 ------ANAC46 --------->ICU4       <---------AHL20(2)<---------LBD16 <-----------GT1<---------GLK1(1)   tgtggtccccttaatcatgtttaaaatatctaaacaaattattggtaaacgaatttccggtattgtggatataacccgaccggttgagatctggcatgtc  9095100                                                             <---------MYB52(1)                                                            <---------SPL7                                                           <----------DOF2                                                           ====================bZIP_DOF                                                  ====================bZIP_DOF                                                  <---------ZAT2     <---------O2                                                  <---------bZIP60(2)--------->ANAC55(2)                                                  --------->ZAT2     <---------TGA1a                                                  --------->TGA1a    --------->TGA1a                                                  <---------O2       --------->O2                                                  --------->At4g35610--------->ANAC58                                                  <---------At4g35610<---------ANAC55(2)                                                  <---------TGA1a    --------->ANAC58                         <---------ANAC58         --------->O2--------->SPL7                         <---------ANAC58       <-----------RAV1(2)  --------->bZIP60(2)                    <---------AHL20(2)        <-----------HVH21  ------>NtERF2                  -----                  <---------AHL20(2)--------->AHL20(1)   <------NtERF2                  --------->YAB1               --------->AHL20(1)   <---------AHL20(2)   --------->At4g35610      --------------->AGL15               <---------AHL20(2)  <---------AHL20(2)  <---------RAP2.6(2)        <---------------AGL15               <---------AHL20(1)  --------->AHL20(2) <------NtERF2  --------->ANAC46--------->YAB1              --------->AHL20(2)  <---------AHL20(1)  --------->ATERF1(1)        ----------------->AGL1              --------->YAB1      <---------AHL20(2) <---------ATERF1(1)         ----------------->AGL2      ----------->GT1  <-----------GT1   <-----------GT1 <---------At4g35610     ----------------->AGL3 ------>YAB1  <---------AHL20(2)  --------->AHL20(2)--------->ALFIN1 ================================   tcataacatggtcaaattatatttttttcgtatcaaattattttgactagtcaggtggccgctgttcggccacgtagcccaatcccataatcagaaaaca  9095200        <---------ANAC58        <---------ANAC46        <---------ANAC58      <---------ANAC46                                 <---------ICU4    --------->REM1(2)                                  --------->ATHB51   -------------->OsCBT                                -------->ATHB1   --------->ALFIN1                                   --------->ICU4 <---------ANAC58                           ------>MYB46(1)        ---------->DOF2           xxxxxxxx <---------ANAC58                           ------>MYB83    --------->TOE2(3)---------->ID1 --------- <---------ANAC46                      <-----------GT1<---------YAB1        <-----------GT1 <-------- ----->DOF2                       ----------->GT1     <---------ATHB51  <----------DOF2--------->AHL20(2) ======bZIP_DOF         <---------ETT(2)    <---------CCA1(2)------>ZmHOX2a(1)  <----------DOF2<-----   aagccgtgttgtgtgtgtgttttccatcgacatctcttgttaaaccaaatctcacaattattcctaaaaaaaagcttttttcctttcattttaaaatctt  9095300                                                                                                   --                                                                                          xxxxxxxxxxx                                                                                          --------->ARR14(2)                                                                                          <---------ARR14(2)                                                                                         <xxxxxxxxxxx                                                                                         <---------ALFIN1                                                                                        xxxxxxxxxxxxx                                                                                       <---------ALFIN1                                                                                      --------->LBD16                                                                              xxxxxxxxxxxxxxxxxx>smallRNA(se3)                                                                             xxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                                                                             <xxxxxxxxxxxxxxxxsmallRNA(i)                                                                             --------->LBD16  <xxxxxx                                                                            --------->ANAC58 xxxxxxxx                                                                            --------->ANAC46 --------                                                                            --------->ANAC55(1)    --                                                                            --------->ANAC58 --------                                                                            --------->ANAC55(2)    <x                                                                            <---------ANAC55(2)    <x                                                                            ----------->GT1  --------                                                                           <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                                                         xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                                                                         xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                                                                        xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                                                       xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                                                                      <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(l2)                                                                      xxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                                                                      xxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                                                                      xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                                                                    <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                                                   ------>NtERF2xxxxxxxxxxxxxxxxxxx>smallRNA(se3)                                                                   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                                                                   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                            <----------DOF2                        <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)      --------->ALFIN1   ------->TEIL                        <xxxxxxxxxxxxxxxxxxxxsmallRNA(fl3) <xxxx xxxxxxxxxxxxxxx>smallRNA(s2)   <------------------------ANAC81   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3) >ARR11(3)            <---------YAB1                        xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)<xxx -ARR11(3)         <---------YAB1               ---------->ID1    <xxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3) -----DOF2         --------->ICU4<------------------------ANAC81  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)   ttatacaagtgtgtcaatttgatgatgaatctttttttttttttttttttgttttttttggagtttctcggccaaaacccgtaattcccccagacccgaa  9095400  Previous    Next  AGI:  At5g26020.1    Description:  transposable element gene. similar to Glutamic acid-rich protein precursor (GB:P13816) Range:  from: 9093598    to: 9094880    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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