Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                          --------->ARR11(3)                                                        <---------ARR11(3)                                                       <---------GLK1(1)  <---------ARR11(3)      <--                                                       --------->GLK1(1)  --------->ARR11(3)      ---            <---------TOE2(3)      ---------->DOF2    --------->ARR11(3) <---------CCA1(2)       <---            ---------->ID1       <---------YAB1<---------ANAC46        --------->YAB1            ----  --------->TOE2(3)     <---------------------WRI1    <---------ARR11(3)<---------AHL20(2)       <--- ----------->RAV1(2) ---------->DOF2         ----------->GT1           --------->AHL20(2)        ----   tttacctgaattttgtggttttttaaagcgggatgatcaaaggcatgttgtttatagatatctatacaatctattatatctccatcttcgctctacaaat  9059600    <---------YAB1  <-----------GT1                                                    <-------TEIL -------AHL20(2)                                     --------->ARR11(3)         --------->TOE2(3) ------>AHL20(2)                               ----------->GT1      --------->GLK1(2) ------AHL20(2)                               --------->ARR11(3)   <---------ARR14(2)             <-- ----->AHL20(1)                               <---------ARR11(3)   --------->ARR14(2)             <-- ------AHL20(1)                        --------->YAB1<---------AHL20(1)      <---------CCA1(2)  ----- ----->AHL20(2)            >>>>>>>>>MYB2  ---------->DOF2          <---------GLK1(2)           ------   aaaattacaatcgatttggaaactcagaaaaccaaaaactataacaaagatgttatatattcgtattcagattcagtccataccttgatggtcttcaacg  9059700                                          <---------DAG2                                         --------->HSFB2a(1)                                         <---------HSFB2a(1)           --------->ANAC58                                   ---------->DOF2                     --------->ANAC46                                 >>>>>>>>>RAP2.2                       --------->ANAC58                               --------->ARR11(3)                    --------->AtMYB61                               <---------ARR11(3)           ----------->GT1 -------TOE1(2)           <------ZmHOX2a(2)               --------------------->WRI1            ----- -------TOE2(2)          --------->AGP1 ------->TEIL     --------->ATHB12--------->ANAC46       <---- -->GAMYB               --------->At4g35610        <-------MYC3      ----------->RAV1(1)  <---------TOE2(3) --->ANAC46             <---------At4g35610        ------->MYC3   <-----------GT1   --------->ICU4 <-   caggtttattaagagccttcaatttcagatcaatatctaaagaacctttcccatatgcttcattgtaaaaaccacacaaaatcacaaagattaagaaaaa  9059800                               --------->ARR11(3)                            <---------TOE1(2)                        ----------->GT1           <---------MYB52(1) <------ZmHOX2a(1)                     <---------TOE1(3)         <---------MYB46(3) <---------TOE2(2)                       <---------TOE2(3)     <---------RAP2.6(2)    <---------TOE2(3)                     ---------->DOF2                 <--   <-----------RAV1(1) --------->ARR11(3)    ------->TEIL     <---------------AGL15               <-- ---->ARR11(3)         <---------ARR11(3)   <---------CCA1(2) --------------->AGL15           ------- -----ARR11(3)        <---------GLK1(1)<----------DOF2        <---------YAB1        --------->DAG2--- --------YAB1   <---------ANAC46--------->CCA1(2)            <-----------------AGL3 <---------TOE2(3)   tctcattgtggctgtttgtcttggagttcttaggatataggcttttgaatcttgaaacttcattcttataaaggttacaaaacaataaggtgttttttat  9059900                                                                                  --------->CCA1(2)                                                                                 <---------GLK1(2)                                                                                 <---------ARR14(2)                                                                                 --------->ARR14(2)                                                                              ----------------->AGL1                                                                             <---------At4g35610                                                                             --------->At4g35610    <---------TOE2(3)                                                     --------->At4g35610  --------->AHL20(2)                                                      <---------At4g35610  <---------AHL20(2)      --------->AHL20(2)         --------->ANAC58   --------->YAB1 <---------YAB1           --------->YAB1           --------->MYB52(1)--------->WOX13(1) -------YAB1           --------->TOE2(3)     ----------->GT1        --------->MYB46(3) -------AHL20(2)    --------->YAB1         ----------->GT1         ------------>CBF -->AHL20(2)       <---------ATHB12     --------->ATHB12          *TSS <---------ATHB12 ------>AHL20(2) --------->WOX13(1)  ---------->DOF2 --------->ANAC58--------->YAB1                 -   ataattaatgtgataatatcaatcacattaatatcaacacaaagattgagaaaaaacggaagtcatgacaacaatcatctgcagatttgggaaacttata  9060000                                         --------->ARR14(2)                                        ------>MYB46(1)           <-----------GT1                  --                                        ------>MYB83   --------->AHL20(2)                          --                                      <---------MYB59  <---------AHL20(2)                ------->TEIL                                      --------------->AGL15    --------->YAB1         <---------YAB1                                     ----------------->AG    --------->AHL20(2)  --------->AHL20(1)<-          --------->ARR11(3)         ----------------->AGL3<---------AHL20(2)    <---------AHL20(1)--          <---------ARR11(3)        -------->P        <---------AHL20(2)        --------->AHL20(2) --          --------->GLK1(2)<---------At4g35610     <---------AHL20(2)         ------>MYB83        <-- ---------->GT1            --------->At4g35610    <---------AHL20(2)          ------>MYB46(1)    <---   tatggtaaacaaaatctttgatatgaaacagctcaacttaccaaatatgttttttatttattttaaaataactactcaccaaatatatatgaatgctctg  9060100                                   <---------ANAC46           ------>ZmHOX2a(1) --------->AHL20(2)                                --------------->AGL15  <-----------GT1            <---------AHL20(2)                                <---------------AGL15 ------->MYB111(1)        <----------DOF2                            --------->AHL20(1) ------->MYB52(2)        <---------ANAC58                            <---------AHL20(2) --------MYB46(3)        <---------ANAC58                            --------->AHL20(2) ------->MYB111(2)   <----------DOF2                     <----------DOF2    --------->ZAT6 ------->MYB46(2)   <---------ANAC58     <------ZmHOX2a(2)           <---------AHL20(1) ------P   =====================================HOX2a_HOX2a         --------->YAB1 ------MYB52(1)     <---------ANAC58    <---------ARR14(2)    --------->ZAT6<-----------GT1   gtagttactactcctatattttgctttgcttttaattacgtcgatccaaaacacataagctttctcactaatataatatcactatttttagttcaattta  9060200                                                             --------->AHL20(2)                                                             <---------AHL20(2)                                                          --------->AHL20(1)                                                          <---------AHL20(1)                                                         <---------AHL20(2)                                                       <---------AHL20(2)                                                       --------->AHL20(2)                                                     <---------AHL20(2)                                                     --------->AHL20(2)                                                   --------->AHL20(2)          <---------ICU4                                                   <---------AHL20(2)    <---------At4g35610                          <---------AHL20(2)     <---------AHL20(2)     --------->ARR14(2)                          <---------YAB1         --------->AHL20(2)     <---------ARR14(2)                       <----------DOF2         --------->AHL20(2)       ------->TEIL                 <---------AHL20(2)            <---------AHL20(2)      <---------CCA1(2)                 <---------ICU4              --------->AHL20(2)<---------AHL20(2)                <---   gtttgagaaacttgactaaatatttctttttattgatgaaataacatatatatatatatatatattaatatgtgtatctgatcaataccatactaatatt  9060300                    <---------YAB1                   <---------TOE2(3)                <---------AHL20(2)            <---------AHL20(2)           <---------AHL20(1)                                                          --------->ICU4           --------->AHL20(2)                                                        --------->AHL20(2)           <---------AHL20(2)                               <---------AHL20(2)      <---------AHL20(2)       --------->AHL20(2)                      --------->AHL20(2)                   --------->AHL20(2)       <---------AHL20(2)            --------->ATHB12       --------->AHL20(2)--------->YAB1 ------AHL20(2)<---------ICU4       <---------YAB1         --------->AHL20(2)----------->GT1 <-------   tcaatgtttttaattaatttttatgttaacttatatttttcattgaattttaaatctaatattaaattctaaacaaatattgataaataattttgaaatc  9060400                                                                                      <--------ATHB1                                                                                      <---------AHL20(2)                                                                                      <---------ICU4                                                                                   --------->YAB1                                                                              <---------YAB1                                                                            <-----------GT1                      --------->ATHB12                                   --------->MYB52(2)                    <---------TOE2(3)                                  --------->DOF5.7(2)        ---                 <---------AHL20(2)                                   --------->TOE1(3)    <---------              <---------ARR11(3)             --------->YAB1           --------->TOE2(3)  <---------AHL20(2)              <---------AHL20(1)            --------->ZAT6           ----------->GT1  --------->ATHB51              --------->AHL20(1)       --------->YAB1               <---------TOE2(3) --------->AHL20(2)              --------->AHL20(2) --------->ANAC58                   <---------TOE1(3)--------->ICU4             <---------CCA1(2)   --------->ANAC46                  <-----------GT1--------->AHL20(2) --GLK1(1) ------>ZmHOX2a(1)     --------->ANAC58     <---------TOE2(3)<---------MYB52(1)--------->AHL20(2)   tcattttgttttcctatatattaatgtttgaatttaagcaatactaatactaatttgatgttattgtattaacgttaattaccattaataatttaacaaa  9060500  Previous    Next  AGI:  At5g25950.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G25960.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN70607.1); contains InterPro domain Protein of unknown function DUF239, plant (InterPro:IPR004314) Range:  from: 9057796    to: 9059966    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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