Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                      -                                                                                         <---------ANAC55(2)                                                          <----------DOF2                --------->ANAC58                                                          =========================================bZIP_DOF                                                       <---------ARR11(3)                <---------TGA1a                                                      <---------CCA1(2)                  --------->TGA1a                                                      <---------ALFIN1                   --------->ANAC58               <---------TOE2(3)                    --------->ANAC46            <---------YAB1     --        <---------ANAC58                       <---------MYB52(1)             --------->YAB1 --------     <----------DOF2                          <-------GAMYB                  <---------YAB1  <------- --------ICU4  <---------YAB1      ----------->GT1  <---------ALFIN1    --------->YAB1   --------->O2 --TEIL <---------ANAC58        <----------DOF2--------->ARR14(2)  ------>ZmHOX2a(2)     <---------O2   attttgactttggtgctatggtagcattttagttctttggtaattttcggttacccacatctttttggatcgaattagaatgataatggacacgtctaga  9033000           <------MYB46(1)           <------MYB83           ----------->GT1      <--------ATHB1      --------->AHL20(2)      --------->ATHB51                                                                 --------->ANAC58      <---------AHL20(2)                                 --------->YAB1                --------->ANAC46      <---------ICU4                     <---------TOE1(2)                           <---------ALFIN1     --------->ICU4                      <---------TOE2(2)                          <---------REM1(2)     <---------ATHB51      --------->ARR11(3)         --------->WOX13(1)        --------->ANAC58 ---------->GT1            <---------ARR11(3)        --------->AHL20(2)         --------->PCF2 ------->At4g35610         <---------GLK1(2)         <---------AHL20(2)         --------->ANAC58----- ->HSFB2a(2)             <---------TOE2(3)     ----------->GT1       <---------MYB52(1)--------->ANAC58 --HSFB2a(2)  <---------MYB46(3)      --------->YAB1--------->ICU4 --------->MYB59 <---------ALFIN1   cagcgtaataatttggtgattacatctaagatttttggaatcatatgttttgtaattaatcagagttattcggtagtatgagaccccacacggctatgaa  9033100                                            -------->P                                            ------>MYB46(1)                                   <------                                            ------>MYB83                                    <--------                                           --------->MYB55(1)                               ---------                                          --------->AtMYB61                            <---------YAB1                                          <---------MYB55(2)                         --------->YAB1                                          <---------MYB111(1)                        <---------ICU4                                          <---------MYB59                           <---------YAB1                                          <---------MYB46(2)                       --------->ARR11(3)                                          --------->MYB46(3)                       <---------ARR11(3)                     <------MYB83         <---------MYB111(2)                     -------->HAHB4  <--         --------->ARR14(2)            ------->GAMYB                              <---------ICU4 ----         <---------ARR11(3)--------->AHL20(2)                                     --------->YAB1 <---   <-----------GT1   <------MYB46(1)  --------->MYB46(3)                         --------->ICU4  <--- -->TEIL <---------ARR14(2)<---------AHL20(2)       --------->ZAT6               <---------ATHB12----   ccatgttaccatatattctaagtgggtttttaatttgataaccacctacctataactctaaattagtctattggatttttctaatgatcatcatataaat  9033200           <---------YAB1                                                                  --------->ANAC58       --------->AHL20(2)                                                           ------->TEIL     <----------DOF2                                                                <---------TOE2(2) ---AHL20(2)--------->YAB1                                                       --------->ANAC55(1) -AHL20(2) <---------AHL20(2)                             --------->ANAC46       --------->ANAC46 >AHL20(2)--------->AHL20(2)                             --------->LBD16         --------->ANAC55(2) -------AHL20(2)                                        --------->ANAC46         --------->ANAC58 ----->AHL20(1)                   <---------AHL20(1)   <---------LBD16           --------->ANAC58 ------AHL20(1)                --------->AHL20(2)    --------->ARR14(2)    --------->YAB1  --------->ANAC58 ------AHL20(2)         ----------->GT1             --------->WOX13(1)<---------TOE1(2)    --------->ANAC46 ----->AHL20(2)--------->YAB1 <---------AHL20(2)  <---------ATHB12<-------TEIL   <---------ANAC55(2)   ttattctctttatataatagtaatcgttgtaaataatatatgtgtgtctcccatcaatccgcatcacattcgtagaatcatacacgtatgtaaacgcatt  9033300                                      --------->ICU4                                     <-------GAMYB                                    ----------->GT1                                    <---------MYB46(3)                                 <------MYB83                                 <------MYB46(1)                                 <---------ANAC46                                --------->MYB111(2)                                <---------AtMYB61                                --------->MYB46(2)                                --------->MYB52(2)                                --------->MYB55(2)                                --------->MYB111(1)                                --------->MYB59                               <---------MYB55(1)                              <---------MYB52(1)                             <-----------HVH21                           ------>ZmHOX2a(2)      <---------ANAC55(2) <------ZmHOX2a(2)              --------->RVE1(1)      --------->ANAC58   <---------ARR11(3)             --------->ARR11(3)      --------->ANAC58   --------->ARR11(3)          <---------AHL20(2)      --------->ANAC46   --------->ARR14(2)          --------->AHL20(2)      --------->ANAC55(1)<---------ARR14(2)<---------AHL20(2)                                       -     <---------LBD16     --------->GLK1(2)<---------AHL20(2)    <---------YAB1              ---------    --------->MYB52(1)   <---------AGP1   --------->AHL20(2) <----------DOF2             <----------DOF2   <---------SPL7       <------ZmHOX2a(1)<---------YAB1 <---------ARR11(3)    ---------->DOF2 -------   tttgacatacggaaaccatacaagtaggatctgttaggtggttattaattcaaaataaaatctcttttcattagaaaatataaagagactacttttataa  9033400                                      -------->HAHB4                            ------>MYB46(1)                            ------>MYB83                          --------->AtMYB61                          <---------ALFIN1                          ------->GAMYB         ----------->RAV1(1)                         <---------MYB111(2)    <---------ALFIN1                         <---------MYB55(2)    --------->ANAC46                         --------->MYB46(3)   --------->LBD16                        ------>MYB46(1) <-----------GT1                        -------->P --------->YAB1 <------------CBF *TSS  ------>MYB83 <---------YAB1 -------->ATHB12 <---------ANAC58 <---------AHL20(2)          ----------->RAV1(1) >YAB1 <------------CBF>>>>>>>>>>MYB80--------->YAB1         --------->ANAC46             ---------->DOF2 ---->TBP        <---------ANAC58--------->AHL20(2)        --------->ANAC46           >>>>>>>>>TBF1   aaagattgggattgtagttccttgccaaccacccatataataatactccccaacaccaaaaacacaacacaaacttagaaaaatggaagaagaaaagaga  9033500                 ------>ZmHOX2a(1)                <---------ALFIN1                                                                  ---            <---------ZAT2                                                                       ----            <---------At4g35610                           ------>ZmHOX2a(2)                  <-------           ----------->ARR10                            <---------AGP1                  <---------ICU4      <---------TOE2(3)                                 ------->TEIL          ---------->DOF2<-------      <---------TOE1(3) <-----------GT1         --------->TOE2(3)            --------->AtMYB61<------  <---------At4g35610  ---------->ARF1       ----------->RAV1(1)    --------->DAG2     <---------YAB1  --------->At4g35610 <-----------HVH21  --------->MYB46(3)        ---------->DOF2   --------->YAB1   ttggagctaaggctagctcctccttgtcaccaattcacttccaacaacaacatcaatggatctaaacaaaaaagctcgaccaaagaaacatcattccttt  9033600                                                                                  --------->AHL20(2)                                                                                 --------->YAB1                                                                            <---------AHL20(1)                                                                            --------->AHL20(2)   <---                                                                            --------->AHL20(1)   ----       <---------GLK1(2)                   <---------YAB1                   <---------AHL20(2)   <--- ------------>AGL15                      --------->YAB1                  --------->YAB1          ---- ------------->AGL3                     <---------ATHB12                <---------YAB1 --------->AHL20(2) --ANAC58                       --------->ATHB12                      --------->YAB1  --------->AHL20(2) --ANAC58                  <---------YAB1<---------ICU4              <---------YAB1 --------->YAB1 ----DOF2            <XXXXXXXXXXXXXXXXXXXXMIR824               <---------ANAC46 --------->AHL20(2)XXX   ccaataacaggttctcttaatctcttctcatgaatgatttgaatcattcttgttcattgtagatgtcttatatgataataaaataaaaataaaaaacaaa  9033700                                                                                    --------->CCA1(2)                                                                                   <---------ARR14(2)                                                                                   --------->ARR14(2)                                                                                   --------->ARR11(3)                                                                                   <---------ARR11(3)                                                                                --------------->AGL15 ------>ZmHOX2a(1)                                                              <---------------AGL15 --------->LBD16                                                               <-----------------AGL2 ------ARR14(2)                                         --------->DAG2       <-----------GT1 ----->ARR14(2)                                        ---------->DOF2      <---------YAB1 ------ARR11(3)                                     --------->YAB1  --------->ARR14(2)              - ----->ARR11(3)   <---------LBD16                  <---------YAB1   <---------ARR14(2) ----------->GT1 XXXXXXXXXXXXXXXXX>MIR172C/D            <---------MYB52(1)       <---------ANAC46  --------->ARR11(1)   atcctggtaattctacagttttcggagattagtttgggtttcggtatctagttatcaaaaagtatttgtgtatatgttataactagatatggctaaaaca  9033800                                      <------ZmHOX2a(2)                                     <---------ARR11(3)                              --------->ATERF1(2)                              <---------DEAR3(1)                              --------->DEAR3(1)                             <------NtERF2                             --------->ATERF1(1)                            <------NtERF2   --------->LBD16        ---------->DOF2                            ------>NtERF2  <---------LBD16------->GAMYB                            <---------ATERF1(1)          --------->ANAC46                           --------->DEAR3(1)            --------->ANAC58               --------->ALFIN1<---------DEAR3(2)        --------->ANAC58               <---------AtMYB61<-----------HVH21       --------->RAP2.6(3)        <---------At4g35610--------->ATERF1(2)         --------->MYB52(1)        --------->At4g35610<---------ATERF1(2)         ------>MYB83--------->MYB52(1)    <------ZmHOX2a(1)      <--------P  <---------ANAC46   --------->ARR11(3)------>MYB46(1)           <XXXXXXXXXXXXXXXXXXX   <---------TOE1(3)       <---------DEAR3(1)         --------->MYB55(1)    --------->At4g35610   <---------TOE2(3)      <---------RAP2.6(2)--------->LBD16     <---------MYB52(2)>>>>>>>>>TBF1 -------->ALFIN1<---------MYB46(3) ----------->ARR10 <---------MYB59      <------ZmHOX2a(1)   gggttgaggtagctccagtggtgggatggccgccggtgagatcatcccggagaaacctaacggcacaactaaaggaggagatgaagaagaaggagagtga  9033900  Previous    Next  AGI:  At5g25890.1    Description:  IAA28 (IAA-ALANINE RESISTANT 2); transcription factor. Identical to Auxin-responsive protein IAA28 (IAA28) [Arabidopsis Thaliana] (GB:Q9XFM0;GB:Q9S9V6); similar to IAA18 (indoleacetic acid-induced protein 18), transcription factor [Arabidopsis thaliana] (TAIR:AT1G51950.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO43721.1); contains InterPro domain AUX/IAA protein; (InterPro:IPR003311); contains InterPro domain Aux/IAA-ARF-dimerisation; (InterPro:IPR011525) Range:  from: 9033418    to: 9034837    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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