Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                  --------->TOE2(3)                --------->ATHB12                              -------->P                        --------->ICU4                              ------>MYB83                      <---------YAB1 ---------DOF2                ------>MYB46(1)             ------>MYB83 --------DAG2               --------->AtMYB61             ------>MYB46(1)                         <-- -------DAG2                <---------MYB59              --------->MYB52(1)                       <-- ------------AG          <-----------GT1             <---------WRKY18(1)                          <-- ------------AGL1 <---------AHL20(1)              <---------ANAC58                    <---------ZAT18 ->ARR14(2)       --------->AHL20(2)              <---------ANAC58  ----------->GT1   --------->ZAT18 --ARR14(2)       <---------AHL20(2)    <---------YAB1 --------->MYB46(3)   <---------ICU4<---------ATHB12   ccttttggacaatatggcattttattttgaccaacctctattctaaatgttagcttgaccaacgtcttgattgtgaaaacattacaaggccactcatttt  9018000                                   <------ZmHOX2a(2)                                  --------->AGP1                                  --------->ARR14(2)                                         --------                                  <---------ARR11(3)          --------->ALFIN1             --------->ZAT18                                  --------->ARR11(3)     <---------ANAC58                 --------->ANAC46                                  <---------ARR14(2)     <---------ANAC46                 --------->ANAC58    ----------->GT1        <---------CCA1(2)   --------->TOE1(1)                          --------->ANAC58   <------ZmHOX2a(1)       --------->GLK1(1)   --------->TOE2(1)  >>>>>>>>>>>>>>>>>LFY<---------YAB1 -------ANAC58         --------->ANAC58   <---------ALFIN1    <---------REM1(1)    --------->ICU4 -------ANAC46         --------->ANAC58--------->ANAC46  <---------ANAC58          ------>ZmHOX2a(1) -------ANAC58   --------->AHL20(2)--------->CCA1(2)<---------AtLEC2   <---------AtMYB61 --------->At4g35610   gcgtaggagtaaaacccattttaaaacgcatatcaagatccacaacacctcgttccatggcatggtgtagccattggtcgatgtccttatgagcgcaaca  9018100                                                                               ------>ZmHOX2a(1)                                                                               --------->LBD16                                                                             ----------->RAV1(2)                                                                         <---------ARR11(3)                                                                         --------->ARR11(3)                                                                     --------->LBD16                                                                    --------->ANAC46                                                                    --------->LBD16                                                                   --------->HSFB2a(2)                                                                   --------->LBD16                 <-                                                                   <---------HSFB2a(2)             <-           <---------AHL20(2)                                     <---------LBD16      <----------DOF2     <------ZmHOX2a(1)       <---------TOE2(3)                 --------->ARR14(2)   <---------ARR11(3) --->RAV1(1)             <----------DOF2                       <---------ARR14(2)   --------->ARR11(3)   tttaagaggacataatattgaaagtttctttatggtattgcaatcggtaagggttttatcaacaaaatccccgaagctctcctgaacatctttcatttct  9018200          <---------LBD16         ------>ZmHOX2a(1)      ------>MYB83                                                            ------->GAMYB------>ZmHOX2a(1)      ------>MYB46(1)                                                        --------->ANAC58    <---    <---------MYB59                                                          --------->ANAC46   <---- --------DAG2                                              ---------->DOF2   --------->ANAC58<------- ---------DOF2                                           <-------TEIL  --------->YAB1 <---------GLK1(2)   cctttaccttcctctggataaactaaatctgagtcgtctaaatagagatgatgttgagattcaaagagttgaatcatcaacgcaaacagattcctccacc  9018300                                                    ------>ZmHOX2a(2)                                                   <------ZmHOX2a(2)                                                  <---------ARR11(3)                                                  --------->ARR14(2)                                                  --------->ARR11(3)                                                  --------->AGP1                                                  <-----------ARR10                                                  --------->ARR14(3)                                                  <---------AGP1                                                  <---------ARR14(3)--------->At4g35610                                                  <---------ARR14(2)<---------At4g35610                                            ===============HOX2a_HOX2a--------->HSFB2a(2)                                            <------ZmHOX2a(1) <-----------ARR10                                            ==============HOX2a_HOX2a <---------HSFB2a(2)                                           <----------ID1     --------->ARR11(3)      --------->CCA1(2)                  --------->CCA1(2)    <---------ARR11(3)  <-----------GT1 -------DOF2                            <---------ARR14(2) --------->ANAC58      --------->ZAT14 -----DAG2                            ----------->ARR10    --------->ANAC58      <---------ZAT14<---- --ALFIN1    <---------REM1(1) <---------ANAC46 ----------->ARR10   ----------->RAV1(2) ------->TEIL   ttttggagataagagatgtagaaacagctcgttttgtgggaagataggacaagatcttagcaagtatctcatctggaagacagtttactgcatctctaga  9018400                                                                                                    <                                                                                                  ---                                                                                                  <--                                                                                                 ----                 --------->GLK1(1)                                                               <---              --------->HSFB2a(2)                                                              <-----         <---------DAG2                                                 --------->ARR11(3)    <------       <-----------------AGL1                                      --------->MYB52(1)  <---------MYB46(3)      <-----------GT1                                 --------->At4g35610          --------->ATHB12--   <---------GLK1(1)                                  <---------At4g35610--------->CCA1(2)    ------- -----ZAT6<----------DOF2   <------ZmHOX2a(2)         --------->ZAT2    <---------ARR14(2)  ---------   gctagatttcacctttctggtatccatgagatcgaagccctagtagtcaaaatatgagctgaagaaaaaaaacagatatagagaatgagtggtttgataa  9018500     ------------>CBF ---------YAB1                                     <----------DOF2                   <---------AHL20(2) ------>AHL20(2)                                   <---------DAG2                    --------->AHL20(2) -------AHL20(2)                              <-----------GT1                   <---------AHL20(2) ----->ICU4           --------->AHL20(1)     <-----------GT1                <---------DAG2 ------YAB1           <---------AHL20(1)  <---------AHL20(2)                <----------DOF2 ----ICU4   <---------TOE2(3)            <---------AHL20(1)              <-----------GT1          --- ---YAB1    <---------TOE1(3)            <---------AHL20(2)           --------->ARR11(3)       <----- ------->AHL20(2)     <---------ARR11(3) --------->AHL20(2)           <---------AHL20(1)  <---------AHL20(2) -->ICU4 --------->ICU4            --------->STY1(2)               --------->AHL20(2)<---------AHL20(1) >YAB1 --------->WOX13(1)          <---------STY1(2)               --------->YAB1<---------AHL20(2)   ttaatatagcaattagggtttcaaaatatttctaactagctaattaatttcccctttatttctagtgaataatatatacttttttattttatttttttta  9018600                                                                         <------MYB46(1)                                                                         ----------->GT1                                                                         <------MYB83                                                                        --------->MYB59                                                                     <---------SPL7                                                                 --------->ARR14(1)                                                                 --------->CCA1(2)                                                                --------->ARR11(1)        --------->AHL20(2)                                    <---------YAB1       --------->AHL20(2)                  <------------CBF <---------bZIP60(1)       <---------AHL20(2)                xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                 <----- --------->MYB46(3)                      --------->ARR11(3) --------->bZIP60(1)     --------->ANAC46 <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(s2)xxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)<---------MYB52(1)   --------->MYB52(1) ------>MYB46(3)                   ------>ZmHOX2a(1)     ----------->HVH21<-------GAMYB  <---------MYB52(2) ------GT1                  ------------>CBFxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)  ----------->RAV1(1)<-   tcaaccgatataaattagaactcaaatgagttcaatcctatgggatattgtttacatatgtgacatgatacggttcggttaacaacacaaaacaaacgtt  9018700                                                  <---------ANAC58                                                  <---------ANAC58          --------->HSFC1(1)                                              <----------DOF2               <---------HSFB2a(2)                       --------->MYB46(3) --------->WRKY38(1)               --------->HSFB2a(2)           --------->ANAC46             <-------GAMYB                       <---------HSFC1(1)  --------->YAB1     <-----------GT1    <---------At4g35610           <---------------AGL15 ----MYB52(1)    --------->TOE2(3)     <-----------RAV1(1)            --------------->AGL15 ---------DOF2  ----------->GT1   <<<<<<<<<TBF1  <------------------------ANAC81              ------>ZmHOX2a(1)   acttttataaaacacaaaacgtttaacaactacttcttcttctgttgactttgcttccttcttgttgaatttctacttcgagaactacttcttctcctac  9018800                                             <----------DOF2                                         ---------->ID1                                       ----------->HVH21                                     --------->O2            <----------DOF2          --------->TGA1a            ===================================bZIP_DOF                                             -        <---------ANAC58             --------->ANAC55(2)                                      <------        <---------ANAC46             ===================bZIP_DOF                              <------        <---------ANAC58             <---------O2---------->ID1          <-------TEIL  --------->YAB1   ============================================bZIP_DOF  <---------TOE1(3)          --------->YAB1  <   <----------DOF2                   <---------TGA1a     <---------TOE2(3)    --------->TOE2(3) <----   ttcttcttttgcgtcttttctgttcttaatcttcttctcacttgacgctttctcgttttcaggtttaatcaaaggttcaacatcaacaatattactaaga  9018900  Previous    Next  AGI:  At5g25860.1    Description:  F-box family protein. Identical to Putative F-box/LRR-repeat protein At5g25860 [Arabidopsis Thaliana] (GB:Q3E7J7); similar to F-box family protein [Arabidopsis thaliana] (TAIR:AT5G40050.1); similar to F-box family protein [Arabidopsis thaliana] (TAIR:AT3G60040.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN74740.1); contains InterPro domain Leucine-rich repeat 2 (InterPro:IPR013101); contains InterPro domain Cyclin-like F-box (InterPro:IPR001810); contains InterPro domain FBD-like (InterPro:IPR006566) Range:  from: 9016911    to: 9018427    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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