Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                        <---------ANAC58                                                                                     --------->ATHB12                                                                                    <---------YAB1                                                                                  ------>ZmHOX2a(2)                                                                                <---------ARR14(2)                                                                                ------->TEIL                                                                                <---------ARR11(3)                                                                                --------->ARR11(3)                         <---------AHL20(2)                                     --------->ARR14(2)                    ---------->ID1 --------->ARR14(2)                 <---------AtMYB61<---------WOX13(1)                  <-----------RAV1(1)    <----------DOF2            <---------MYB52(1)<---------ANAC58 -DOF2      --------->ICU4         <---------ARR14(2)     <---------ICU4        <---------AGP1   tttttgcaattgcaatgtttttgttgtttatttggagtattctctttcgattcaacttcattatgtcttcgtgaggtcgatggatcttgattgctacata  8978900                                                                                                   --                                                                                               <-----                          <---------YAB1                                <---------MYB59        <-----       --------->YAB1     <---------TOE2(3)                            --------->ANAC46        <-----      <---------ATHB12 ------>ZmHOX2a(1)                             <-----------GT1 <---------At4g35610      <<<<<<<<<ARR2   --------->TOE1(3)                    <-----------GT1           --------->At4g35610    --------->WOX13(1)--------->TOE2(3)           ----------->GT1 <---------ICU4<---------GLK1(2)<---   atcaaacaatcaaaaatgctaattccttaagattgaaatagatttgatggaacagagaaattaaccaatttttacctcactcgattcttctgaacttggt  8979000                                                                                        <---------ARR14(2)                                                                                        --------->GLK1(2)                                                                                      --------->HSFC1(2)                    --------->MYB55(2)                                                <---------HSFC1(2)     ------>MYB83   <---------MYB46(3)                                                --------->HSFB2a(1)     ------>MYB46(1)--------->ABI4(2)                                                 <---------HSFB2a(1)   <---------MYB59 --------->ALFIN1           --------->ARR14(2)               --------->ANAC46  ----------------->AGL1                     <---------MYB52(1)      <---------LBD16 <---------AtMYB61  ----------------->AG                     <---------ANAC58        <-----------GT1  <------NtERF2 --------->HVH21   <---------AtMYB61       <---------ANAC58    <---------ARR11(3) <---------DEAR3(1) ----ANAC58     --------->ALFIN1 <------NtERF2<---------ARR14(2)<---------GLK1(1) <---------ANAC46 --GAMYB    ---------->DOF2    <---------DEAR3(1)    <---------MYB46(3)     <---------ZAT14>>>>>>>ZML2 ----ANAC58<---------REM1(1)  <---------ABI4(1)  <---------YAB1--------->ARR11(3)<---------LBD16  <-- ------MYB46(3) <---------DEAR3(1)--------->ALFIN1  <---------WOX13(1) --------->LBD16<---------MYB46(3)   tgtgaccaaattggtgaagcggtggtttctgaggcggtgtgacttccgtttctgattgttgagaagatttcaccggagaacacggcggaggttctagcga  8979100                                                 --------->LBD16                                               <---------LBD16                                           ----------->HVH21                                          <---------WOX13(1)             --------->HSFB2a(1)                                    --------->ARR11(3)                  --------->ARR14(2)                                    <---------ARR11(3)                  --------->ARR11(3)                                   <---------GLK1(1)         <---------YAB1                                   --------->RVE1(1)      --------->GLK1(2)                      --------->LBD16   --------->ATHB12 --------->ARR14(2)         <---------ARR14(2)       --------->ARR11(3)     <---------GLK1(2)         --------->ARR14(2)       <---------ARR11(3)     <---------ARR14(2)                        <-         ------->TEIL--------->ANAC46  <---------YAB1  ----------->ARR10<---------ARR14(2) <---------         --------->GLK1(2)    ----------->GT1 <---------ANAC46          <---------ARR11(3)<---------- --------DOF2       <---------LBD16--------->GLK1(1)  <------ZmHOX2a(1)<---------CCA1(2)<---------ARR11(3)   cttttgaaacgaatccatcttctccgcagggatggagatatctgattgacgcgggaggagattctgattactcaaatcttccatagtgaagaactatata  8979200                                                                                    ------>ZmHOX2a(2)                                                                                   <---------RVE1(1)                                                              *TSS   <------NtERF2 <------ZmHOX2a(2)                                                        <----------DOF2     <----------DOF2 <---------At4g35610                                 --------------------->WRI1   --------->ARR11(3) --------->At4g35610   <---------TOE2(3)           <<<<<<<<<TBF1   <---------DEAR3(1)<----------DOF2 -----ZmHOX2a(1)       <---------TOE1(3)        <<<<<<<<<TBF1<---------ANAC58     --------->AGP1 ------AGL15       <----------DOF2           <<<<<<<<<TBF1   <---------ANAC58     <---------ARR11(3) -------AGL3    <---------YAB1          <------------------------ANAC81 <---------CCA1(2)   aggagcagagattgttttatgctttaagcttgaatagctctctcttcttcttcttcttcttttgcttcgtcgtcgtctctttgagatctttttgaaaaat  8979300                                                                                          ===========                                                                                          <------ZmHOX2a(2)                                               --------->At4g35610                       <---------ARR11(3)                                               <---------At4g35610                       --------->ARR11(3)            <---------YAB1            --------->MYB52(1) ----------->GT1               <---------YAB1   <------------CBF               <---------ARR11(3)  --------->DAG2         ------>ZmHOX2a(2) --------->AHL20(2)               --------->GLK1(2)  --------->DAG2        <---------ARR11(3) <---------AHL20(2)               <-----------ARR10 ---------->DOF2        --------->ARR11(3)   caaaaaattgaattttgatgagagtttgatcaacaaaatctaacggttgagatgaaaaggggttaatcgacggtttagatcgtttgattaagatcgatct  8979400                                                                  --------->ALFIN1                                                                  <---------AtMYB61                                                                <---------ANAC46                                                             --------->ALFIN1                                                            <-------MYC3                                                            ------->MYC3                                                            ------->MYC2                                                            <-------PIF5                                                            ------->PIF5                                                            ------->MYC4                                                            <-------MYC4                                                            <-------MYC2                                                            <-------PIF4                                                            ------->PIF4                    <---------ARR14(2)                     --------->TGA1a                --------->At4g35610                        --------->O2                         -----           --------->CCA1(2)                               <---------TGA1a                     <-----          --------->ARR11(1)                               <---------O2                 <---------TOE1(2)          <---------ARR14(2)                             <------------OsbHLH66          <---------TOE2(2)          --------->ARR14(2)   ---------->DOF2         <-----------GT1                <---------ANAC58         <------ZmHOX2a(1)---------->ID1       --------->LBD16 <---------DEAR3(1)     <---------ANAC58 ===============HOX2a_HOX2a    ======================================bZIP_DOF      <-----------GT1   aggtttttagaggatacgagcggaatttggcgctaaaggagagagactccgagtgttttacacgtgcggtggtattgtttttttttttccttggtttatg  8979500     <-----------------AGL1    ------>MYB46(1)    --------->MYB52(1)    ------>MYB83                                                                                    <    -------->P                                                                                   <---   --------->MYB55(1)                                                                            <---  ------->GAMYB   <-----------GT1                                                                ----  --------->DEAR3(1)                <---------YAB1                                            <------  ----------->HVH21        <---------AHL20(2)                                                <------- --------->MYB46(3)        --------->AHL20(2)                                             <---------- --------->DEAR3(2)   --------->LBD16                                                  -------------- ---->YAB1  <---------TOE2(3)    <---------AHL20(2)              <-------TEIL      <---------MYB52(1) ----YAB1   <---------TOE1(3)   --------->AHL20(2) <---------AHL20(2)             <---------RAP2.6(3)   ataaccgaccggttaaggtttttccgaatttaaattttatatttgttttggatttattttctgtaaattcatgctggaattggccgttttttttaccttt  8979600    <---------ZAT6 <-----------GT1 ---------YAB1 ------YAB1 ------AHL20(2)                                        --------->YAB1 ----->AHL20(2)                                      --------->ICU4 --------->ANAC46 ----DOF2                                          <---------------AGL15 --DAG2                           <-----------GT1  --------------->AGL15           --------->AHL20(2) -GT1                         <----------DOF2     ----------------->AGL3     <-----------GT1 ->AtSPL8             <-----------HVH21           ----------------->AGL2  <---------ICU4   ttattactgtaaacaaacttgaaatgtcaactctttttactatatgaaaatcgccattaatagatgctacaaaccaatattaccaaaaaatacaatactg  8979700                                                                                --------->MYB52(1)                                                                            ------>MYB46(1)                <---------ANAC46                                            ------>MYB83           <-----------RAV1(1)                                     <---------WOX13(1)         <---------ANAC58                     <---------ANAC58    <---------ANAC46                <--         <---------ANAC58                     <---------ANAC58    <---------ANAC58                <--         <---------ANAC46        ----------->GT1         <---------TOE2(3)--------->TOE1(2)       <--       --------->GLK1(2)        ----------->GT1<----------DOF2    <---------ANAC58      <---------At4g35610   aattgtgagtttcttgttgctcatatggtatacaagggaaaaaatttggctttctgtttaagtttattgcttgatacctacaaaacagagagctacttcg  8979800  Previous    Next  AGI:  At5g25790.1    Description:  transcription factor. similar to tesmin/TSO1-like CXC domain-containing protein [Arabidopsis thaliana] (TAIR:AT4G29000.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO44053.1); contains InterPro domain Tesmin/TSO1-like, CXC (InterPro:IPR005172) Range:  from: 8977103    to: 8979262    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g25800.1    Description:  exonuclease family protein. similar to exonuclease [Arabidopsis thaliana] (TAIR:AT3G50100.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO60902.1); contains InterPro domain Polynucleotidyl transferase, Ribonuclease H fold; (InterPro:IPR012337); contains InterPro domain Exonuclease; (InterPro:IPR006055); contains InterPro domain Exonuclease, RNase T and DNA polymerase III (InterPro:IPR013520) Range:  from: 8979625    to: 8982876    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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